PHENYLACETIC ACID (BioDeep_00000229664)

Main id: BioDeep_00000400112

 

human metabolite PANOMIX_OTCML-2023 natural product BioNovoGene_Lab2019


代谢物信息卡片


2-phenylacetic acid

化学式: C8H8O2 (136.0524)
中文名称: 苯乙酸-羧基-14C, 苯乙酸
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C1=CC=C(C=C1)CC(=O)O
InChI: InChI=1S/C8H8O2/c9-8(10)6-7-4-2-1-3-5-7/h1-5H,6H2,(H,9,10)

描述信息

D009676 - Noxae > D000963 - Antimetabolites
D000970 - Antineoplastic Agents

同义名列表

4 个代谢物同义名

2-phenylacetic acid; PHENYLACETIC ACID; Phenylacetic acid; Phenylacetic acid



数据库引用编号

20 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

210 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 8 ALB, BCL2, CAT, CDKN1A, PC, PPARG, RARB, XDH
Peripheral membrane protein 3 ACHE, CYP1B1, HSD17B6
Endoplasmic reticulum membrane 3 BCL2, CYP1B1, PON1
Nucleus 7 ACHE, ALB, BCL2, CDKN1A, PPARA, PPARG, RARB
cytosol 8 ALB, BCL2, CAT, CDKN1A, LIPE, PC, PPARG, XDH
nuclear body 1 CDKN1A
centrosome 1 ALB
nucleoplasm 4 CDKN1A, PPARA, PPARG, RARB
RNA polymerase II transcription regulator complex 1 PPARG
Cell membrane 4 ACHE, LIPE, PTGDR2, TNF
Early endosome membrane 1 HSD17B6
Multi-pass membrane protein 1 PTGDR2
Synapse 1 ACHE
cell surface 3 ACHE, AMELX, TNF
Golgi apparatus 2 ACHE, ALB
Golgi membrane 1 INS
neuromuscular junction 1 ACHE
neuronal cell body 1 TNF
Cytoplasm, cytosol 1 LIPE
plasma membrane 4 ACHE, BCHE, PTGDR2, TNF
Membrane 5 ACHE, BCL2, CAT, CYP1B1, LIPE
caveola 1 LIPE
extracellular exosome 3 ALB, CAT, PON1
Lumenal side 1 HSD17B6
endoplasmic reticulum 3 ALB, BCL2, HSD17B6
extracellular space 7 ACHE, ALB, BCHE, INS, PON1, TNF, XDH
perinuclear region of cytoplasm 3 ACHE, CDKN1A, PPARG
mitochondrion 4 BCL2, CAT, CYP1B1, PC
protein-containing complex 4 ALB, BCL2, CAT, CDKN1A
intracellular membrane-bounded organelle 4 CAT, CYP1B1, HSD17B6, PPARG
Microsome membrane 2 CYP1B1, HSD17B6
Secreted 5 ACHE, ALB, BCHE, INS, PRB1
extracellular region 9 ACHE, ALB, AMELX, BCHE, CAT, INS, PON1, PRB1, TNF
Mitochondrion outer membrane 1 BCL2
Single-pass membrane protein 1 BCL2
mitochondrial outer membrane 1 BCL2
Mitochondrion matrix 1 PC
mitochondrial matrix 2 CAT, PC
Extracellular side 1 ACHE
anchoring junction 1 ALB
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
external side of plasma membrane 1 TNF
Secreted, extracellular space, extracellular matrix 1 AMELX
high-density lipoprotein particle 1 PON1
nucleolus 1 CDKN1A
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
Membrane raft 1 TNF
pore complex 1 BCL2
focal adhesion 1 CAT
Peroxisome 2 CAT, XDH
basement membrane 1 ACHE
sarcoplasmic reticulum 1 XDH
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
collagen-containing extracellular matrix 1 AMELX
receptor complex 1 PPARG
neuron projection 1 PTGDR2
ciliary basal body 1 ALB
chromatin 3 PPARA, PPARG, RARB
phagocytic cup 1 TNF
centriole 1 ALB
spindle pole 1 ALB
blood microparticle 3 ALB, BCHE, PON1
Lipid-anchor, GPI-anchor 1 ACHE
endosome lumen 1 INS
Lipid droplet 1 LIPE
Membrane, caveola 1 LIPE
side of membrane 1 ACHE
myelin sheath 1 BCL2
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 2 CAT, INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 4 ALB, AMELX, BCHE, INS
platelet alpha granule lumen 1 ALB
endocytic vesicle 1 AMELX
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
nuclear envelope lumen 1 BCHE
synaptic cleft 1 ACHE
cyclin-dependent protein kinase holoenzyme complex 1 CDKN1A
spherical high-density lipoprotein particle 1 PON1
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
catalase complex 1 CAT
BAD-BCL-2 complex 1 BCL2
PCNA-p21 complex 1 CDKN1A
[Isoform H]: Cell membrane 1 ACHE
ciliary transition fiber 1 ALB
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Peiqi Zhang, Jose Huguet-Tapia, Zhao Peng, Sanzhen Liu, Ken Obasa, Anna K Block, Frank F White. Genome analysis and hyphal movement characterization of the hitchhiker endohyphal Enterobacter sp. from Rhizoctonia solani. Applied and environmental microbiology. 2024 Mar; 90(3):e0224523. doi: 10.1128/aem.02245-23. [PMID: 38319098]
  • Xinchun Li, HuiHui Hou, He Liu, Hancheng Wang, Liuti Cai, Mengnan An, Chong Zhang, Yuanhua Wu. Identification of 3-Methoxyphenylacetic Acid as a Phytotoxin, Produced by Rhizoctonia solani AG-3 TB. Molecules (Basel, Switzerland). 2023 Jan; 28(2):. doi: 10.3390/molecules28020790. [PMID: 36677848]
  • Xu Pang, Guo-Wei Cai, Meng-Yan Wang, Xiu-Fei Chen, Wen-Ni He, Wu-Li Zhao, Tao Zhang, Li-Yan Yu. Metabolites from the plant endophytic fungus Penicillium sp. CPCC 401423 and their cytotoxic activity against MIA PaCa-2 cells. Journal of Asian natural products research. 2022 Aug; ?(?):1-12. doi: 10.1080/10286020.2022.2104719. [PMID: 35920176]
  • Rifaat Safadi, Robert S Rahimi, Dominique Thabut, Jasmohan S Bajaj, Kalyan Ram Bhamidimarri, Nikolaos Pyrsopoulos, Amy Potthoff, Stan Bukofzer, Laurene Wang, Khurram Jamil, Krishna R Devarakonda. Pharmacokinetics/pharmacodynamics of L-ornithine phenylacetate in overt hepatic encephalopathy and the effect of plasma ammonia concentration reduction on clinical outcomes. Clinical and translational science. 2022 06; 15(6):1449-1459. doi: 10.1111/cts.13257. [PMID: 35238476]
  • Xiaofeng Wang, Regis A Vilchez. Population Pharmacokinetic Analysis to Assist Dose Selection of the L-Ornithine Salt of Phenylacetic Acid. Clinical pharmacokinetics. 2022 04; 61(4):515-526. doi: 10.1007/s40262-021-01075-1. [PMID: 34786649]
  • Hang Pan, Yang Xiao, Ailin Xie, Zhu Li, Haixia Ding, XiaoJu Yuan, Ran Sun, Qiuju Peng. The antibacterial mechanism of phenylacetic acid isolated from Bacillus megaterium L2 against Agrobacterium tumefaciens. PeerJ. 2022; 10(?):e14304. doi: 10.7717/peerj.14304. [PMID: 36389424]
  • Xiaofeng Wang, Jack Tseng, Carmen Mak, Nagaraju Poola, Regis A Vilchez. Exposures of Phenylacetic Acid and Phenylacetylglutamine Across Different Subpopulations and Correlation with Adverse Events. Clinical pharmacokinetics. 2021 12; 60(12):1557-1567. doi: 10.1007/s40262-021-01047-5. [PMID: 34125423]
  • Bartosz Jablonski, Andrzej Bajguz, Joanna Bocian, Waclaw Orczyk, Anna Nadolska-Orczyk. Genotype-Dependent Effect of Silencing of TaCKX1 and TaCKX2 on Phytohormone Crosstalk and Yield-Related Traits in Wheat. International journal of molecular sciences. 2021 Oct; 22(21):. doi: 10.3390/ijms222111494. [PMID: 34768924]
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  • Feiyu Huang, Xiaoyu Li, Jian Guo, Hai Feng, Fei Yang. Aromatic hydrocarbon compound degradation of phenylacetic acid by indigenous bacterial Sphingopyxis isolated from Lake Taihu. Journal of toxicology and environmental health. Part A. 2019; 82(22):1164-1171. doi: 10.1080/15287394.2019.1703510. [PMID: 31833448]
  • Kai-Hong Guo, Kun-Hua Lu, Yi-Chun Yeh. Cell-Based Biosensor with Dual Signal Outputs for Simultaneous Quantification of Phenylacetic Acid and Phenylethylamine. ACS synthetic biology. 2018 12; 7(12):2790-2795. doi: 10.1021/acssynbio.8b00416. [PMID: 30418753]
  • Susan A Berry, Jerry Vockley, Alexander A Vinks, Min Dong, George A Diaz, Shawn E McCandless, Wendy E Smith, Cary O Harding, Roberto Zori, Can Ficicioglu, Uta Lichter-Konecki, Renee Perdok, Beth Robinson, Robert J Holt, Nicola Longo. Pharmacokinetics of glycerol phenylbutyrate in pediatric patients 2 months to 2 years of age with urea cycle disorders. Molecular genetics and metabolism. 2018 11; 125(3):251-257. doi: 10.1016/j.ymgme.2018.09.001. [PMID: 30217721]
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