Squalamine (BioDeep_00000011434)

   

natural product


代谢物信息卡片


3beta-N-1-(N-[3-(4-aminobutyl)]- 1,3-diaminopropane)-7alpha,24R-dihydroxy-5alpha-cholestane 24-sulfate

化学式: C34H65N3O5S (627.4645)
中文名称: 角鲨胺
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: CC(C)C(CCC(C)C1CCC2C1(CCC3C2C(CC4C3(CCC(C4)NCCCNCCCCN)C)O)C)OS(=O)(=O)O
InChI: InChI=1S/C34H65N3O5S/c1-23(2)31(42-43(39,40)41)12-9-24(3)27-10-11-28-32-29(14-16-34(27,28)5)33(4)15-13-26(21-25(33)22-30(32)38)37-20-8-19-36-18-7-6-17-35/h23-32,36-38H,6-22,35H2,1-5H3,(H,39,40,41)/t24-,25-,26+,27-,28+,29+,30-,31-,32+,33+,34-/m1/s1

描述信息

C274 - Antineoplastic Agent > C1742 - Angiogenesis Inhibitor > C2143 - Endothelial Cell Inhibitor
D006133 - Growth Substances > D043924 - Angiogenesis Modulating Agents
D000970 - Antineoplastic Agents > D020533 - Angiogenesis Inhibitors
D000890 - Anti-Infective Agents > D000900 - Anti-Bacterial Agents
D020011 - Protective Agents > D016588 - Anticarcinogenic Agents
D006133 - Growth Substances > D006131 - Growth Inhibitors

同义名列表

4 个代谢物同义名

3beta-N-1-(N-[3-(4-aminobutyl)]- 1,3-diaminopropane)-7alpha,24R-dihydroxy-5alpha-cholestane 24-sulfate; Squalamine; SCHEMBL343815; Squalamine



数据库引用编号

16 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

12 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 11 ALB, ANG, CASP8, CCNB1, CDH5, CDK1, ERBB2, PTK2, PTPN1, SNCA, VEGFA
Peripheral membrane protein 2 PTK2, PTPN1
Endosome membrane 1 ERBB2
Endoplasmic reticulum membrane 3 CALU, CDK1, PTPN1
Nucleus 10 ALB, ANG, CASP8, CCNB1, CDK1, ERBB2, PHF12, PTK2, SNCA, VEGFA
cytosol 10 ACP5, ALB, ANG, CASP8, CCNB1, CDK1, ERBB2, PTK2, PTPN1, SNCA
centrosome 4 ALB, CCNB1, CDK1, PTK2
nucleoplasm 7 CASP8, CCNB1, CDH17, CDH5, CDK1, ERBB2, PHF12
Cell membrane 6 CDH17, CDH5, ERBB2, PECAM1, PTK2, SLC4A1
Cytoplasmic side 2 PTK2, PTPN1
lamellipodium 1 CASP8
ruffle membrane 1 ERBB2
Cell projection, axon 1 SNCA
Multi-pass membrane protein 2 SLC4A1, SLC9C1
Synapse 1 SNCA
cell cortex 2 PTK2, SNCA
cell junction 3 CDH17, CDH5, PECAM1
cell surface 3 CDH17, CDH5, VEGFA
glutamatergic synapse 1 PTPN1
Golgi apparatus 3 ALB, CALU, VEGFA
Golgi membrane 1 INS
growth cone 2 ANG, SNCA
neuromuscular junction 1 ERBB2
neuronal cell body 2 ANG, SNCA
postsynapse 2 PTPN1, SNCA
presynaptic membrane 1 ERBB2
Lysosome 2 ACP5, SNCA
plasma membrane 8 CDH17, CDH5, ERBB2, PECAM1, PTK2, SLC4A1, SLC9C1, SNCA
synaptic vesicle membrane 1 SNCA
Membrane 12 ACP5, CALU, CCNB1, CDH17, CDH5, CDK1, ERBB2, PTPN1, SLC4A1, SLC9C1, SNCA, VEGFA
apical plasma membrane 1 ERBB2
axon 1 SNCA
basolateral plasma membrane 3 CDH17, ERBB2, SLC4A1
extracellular exosome 4 ALB, CDK1, PECAM1, SLC4A1
endoplasmic reticulum 4 ALB, CALU, PTPN1, VEGFA
extracellular space 6 ALB, ANG, INS, PECAM1, SNCA, VEGFA
perinuclear region of cytoplasm 3 ERBB2, PTK2, SNCA
adherens junction 3 CDH17, CDH5, VEGFA
bicellular tight junction 1 CDH5
mitochondrion 3 CASP8, CDK1, SNCA
protein-containing complex 5 ALB, CASP8, PECAM1, PTPN1, SNCA
intracellular membrane-bounded organelle 1 PTK2
Single-pass type I membrane protein 4 CDH17, CDH5, ERBB2, PECAM1
Secreted 6 ALB, ANG, CALU, INS, SNCA, VEGFA
extracellular region 7 ALB, ANG, CALU, ERBB2, INS, SNCA, VEGFA
cytoplasmic side of plasma membrane 1 SLC4A1
Single-pass membrane protein 1 CDH17
mitochondrial outer membrane 1 CASP8
mitochondrial matrix 3 CCNB1, CDK1, PTPN1
anchoring junction 2 ALB, PTK2
motile cilium 1 SLC9C1
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 2 CDK1, PTK2
nuclear membrane 1 CDH5
external side of plasma membrane 2 CDH5, PECAM1
Secreted, extracellular space, extracellular matrix 1 VEGFA
actin cytoskeleton 2 ANG, SNCA
dendritic spine 1 PTK2
Z disc 1 SLC4A1
cytoplasmic vesicle 1 ERBB2
nucleolus 1 ANG
midbody 1 CDK1
Early endosome 2 ERBB2, PTPN1
cell-cell junction 2 CDH5, PECAM1
Cell projection, lamellipodium 1 CASP8
Cell projection, ruffle membrane 1 ERBB2
Cytoplasm, perinuclear region 2 ERBB2, PTK2
Membrane raft 1 PECAM1
Cell junction, focal adhesion 1 PTK2
Cytoplasm, cytoskeleton 1 PTK2
focal adhesion 1 PTK2
Cell junction, adherens junction 1 CDH5
extracellular matrix 1 VEGFA
basement membrane 1 ANG
secretory granule 1 VEGFA
receptor complex 1 ERBB2
ciliary basal body 2 ALB, PTK2
cell projection 1 PTK2
mitotic spindle 1 CDK1
supramolecular fiber 1 SNCA
Chromosome 1 ANG
cytoskeleton 2 CASP8, PTK2
Cytoplasm, cytoskeleton, cilium basal body 1 PTK2
centriole 1 ALB
mitochondrial crista 1 PTPN1
Nucleus, nucleolus 1 ANG
spindle pole 2 ALB, CCNB1
chromosome, telomeric region 1 CDK1
Cytoplasm, cell cortex 1 PTK2
blood microparticle 2 ALB, SLC4A1
Basolateral cell membrane 1 SLC4A1
Endomembrane system 1 PTPN1
endosome lumen 2 INS, PTPN1
sorting endosome 1 PTPN1
Cell projection, cilium, flagellum membrane 1 SLC9C1
Melanosome 1 CALU
Cytoplasm, Stress granule 1 ANG
cytoplasmic stress granule 1 ANG
cell body 1 CASP8
myelin sheath 1 ERBB2
stress fiber 1 PTK2
basal plasma membrane 1 ERBB2
secretory granule lumen 1 INS
secretory granule membrane 1 PECAM1
Golgi lumen 1 INS
endoplasmic reticulum lumen 3 ALB, CALU, INS
transcription repressor complex 1 PHF12
platelet alpha granule lumen 2 ALB, VEGFA
axon terminus 1 SNCA
endocytic vesicle 1 ANG
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
outer kinetochore 1 CCNB1
semaphorin receptor complex 1 ERBB2
Sarcoplasmic reticulum lumen 1 CALU
Sin3-type complex 1 PHF12
spindle microtubule 1 CDK1
CD95 death-inducing signaling complex 1 CASP8
death-inducing signaling complex 1 CASP8
ripoptosome 1 CASP8
[Isoform 1]: Cell membrane 1 ERBB2
[Isoform Long]: Cell membrane 1 PECAM1
catenin complex 2 CDH17, CDH5
platelet alpha granule membrane 1 PECAM1
cyclin-dependent protein kinase holoenzyme complex 1 CDK1
ankyrin-1 complex 1 SLC4A1
cortical cytoskeleton 1 SLC4A1
angiogenin-PRI complex 1 ANG
inclusion body 1 SNCA
ERBB3:ERBB2 complex 1 ERBB2
cyclin A1-CDK1 complex 1 CDK1
cyclin A2-CDK1 complex 1 CDK1
cyclin B1-CDK1 complex 2 CCNB1, CDK1
[N-VEGF]: Cytoplasm 1 VEGFA
[VEGFA]: Secreted 1 VEGFA
[Isoform L-VEGF189]: Endoplasmic reticulum 1 VEGFA
[Isoform VEGF121]: Secreted 1 VEGFA
[Isoform VEGF165]: Secreted 1 VEGFA
VEGF-A complex 1 VEGFA
[Isoform Delta15]: Cell junction 1 PECAM1
cytoplasmic side of endoplasmic reticulum membrane 1 PTPN1
ciliary transition fiber 1 ALB


文献列表

  • Michele Perni, Céline Galvagnion, Alexander Maltsev, Georg Meisl, Martin B D Müller, Pavan K Challa, Julius B Kirkegaard, Patrick Flagmeier, Samuel I A Cohen, Roberta Cascella, Serene W Chen, Ryan Limbocker, Pietro Sormanni, Gabriella T Heller, Francesco A Aprile, Nunilo Cremades, Cristina Cecchi, Fabrizio Chiti, Ellen A A Nollen, Tuomas P J Knowles, Michele Vendruscolo, Adriaan Bax, Michael Zasloff, Christopher M Dobson. A natural product inhibits the initiation of α-synuclein aggregation and suppresses its toxicity. Proceedings of the National Academy of Sciences of the United States of America. 2017 02; 114(6):E1009-E1017. doi: 10.1073/pnas.1610586114. [PMID: 28096355]
  • Alexander S Maltsev, Alexander Grishaev, Julien Roche, Michael Zasloff, Ad Bax. Improved cross validation of a static ubiquitin structure derived from high precision residual dipolar couplings measured in a drug-based liquid crystalline phase. Journal of the American Chemical Society. 2014 Mar; 136(10):3752-5. doi: 10.1021/ja4132642. [PMID: 24568736]
  • Eric Di Pasquale, Chanaz Salmi-Smail, Jean-Michel Brunel, Patrick Sanchez, Jacques Fantini, Marc Maresca. Biophysical studies of the interaction of squalamine and other cationic amphiphilic molecules with bacterial and eukaryotic membranes: importance of the distribution coefficient in membrane selectivity. Chemistry and physics of lipids. 2010 Feb; 163(2):131-40. doi: 10.1016/j.chemphyslip.2009.10.006. [PMID: 19883637]
  • Chanaz Salmi, Celine Loncle, Nicolas Vidal, Yves Letourneux, Jacques Fantini, Marc Maresca, Nadira Taïeb, Jean-Marie Pagès, Jean Michel Brunel. Squalamine: an appropriate strategy against the emergence of multidrug resistant gram-negative bacteria?. PloS one. 2008 Jul; 3(7):e2765. doi: 10.1371/journal.pone.0002765. [PMID: 18648511]
  • R Scott Obach, Franco Lombardo, Nigel J Waters. Trend analysis of a database of intravenous pharmacokinetic parameters in humans for 670 drug compounds. Drug metabolism and disposition: the biological fate of chemicals. 2008 Jul; 36(7):1385-405. doi: 10.1124/dmd.108.020479. [PMID: 18426954]
  • Sang-Seon Yun, Weiming Li. Identification of squalamine in the plasma membrane of white blood cells in the sea lamprey, Petromyzon marinus. Journal of lipid research. 2007 Dec; 48(12):2579-86. doi: 10.1194/jlr.m700294-jlr200. [PMID: 17726196]
  • Austin C Li, Andrew M Sabo, Timothy McCormick, Sean M Johnston. Quantitative analysis of squalamine, a self-ionization-suppressing aminosterol sulfate, in human plasma by LC-MS/MS. Journal of pharmaceutical and biomedical analysis. 2004 Feb; 34(3):631-41. doi: 10.1016/s0731-7085(03)00556-9. [PMID: 15127819]
  • Desirée Hao, Lisa A Hammond, S Gail Eckhardt, Amita Patnaik, Chris H Takimoto, Garry H Schwartz, Andrew D Goetz, Anthony W Tolcher, Heather A McCreery, Khalid Mamun, Jon I Williams, Kenneth J Holroyd, Eric K Rowinsky. A Phase I and pharmacokinetic study of squalamine, an aminosterol angiogenesis inhibitor. Clinical cancer research : an official journal of the American Association for Cancer Research. 2003 Jul; 9(7):2465-71. doi: . [PMID: 12855619]
  • P Bhargava, J L Marshall, W Dahut, N Rizvi, N Trocky, J I Williams, H Hait, S Song, K J Holroyd, M J Hawkins. A phase I and pharmacokinetic study of squalamine, a novel antiangiogenic agent, in patients with advanced cancers. Clinical cancer research : an official journal of the American Association for Cancer Research. 2001 Dec; 7(12):3912-9. doi: . [PMID: 11751482]
  • P B Savage, C Li. Cholic acid derivatives: novel antimicrobials. Expert opinion on investigational drugs. 2000 Feb; 9(2):263-72. doi: 10.1517/13543784.9.2.263. [PMID: 11060676]
  • B S Selinsky, Z Zhou, K G Fojtik, S R Jones, N R Dollahon, A E Shinnar. The aminosterol antibiotic squalamine permeabilizes large unilamellar phospholipid vesicles. Biochimica et biophysica acta. 1998 Mar; 1370(2):218-34. doi: 10.1016/s0005-2736(97)00265-4. [PMID: 9545568]
  • K Kikuchi, E M Bernard, A Sadownik, S L Regen, D Armstrong. Antimicrobial activities of squalamine mimics. Antimicrobial agents and chemotherapy. 1997 Jul; 41(7):1433-8. doi: 10.1128/aac.41.7.1433. [PMID: 9210661]