Gibberellin A19 (BioDeep_00000003521)

   

human metabolite Endogenous Plant Hormones natural product


代谢物信息卡片


(1S,2S,3S,4R,8R,9R,12S)-8-formyl-12-hydroxy-4-methyl-13-methylidenetetracyclo[10.2.1.0^{1,9}.0^{3,8}]pentadecane-2,4-dicarboxylic acid

化学式: C20H26O6 (362.1729)
中文名称: 赤霉素A19
谱图信息: 最多检出来源 Homo sapiens(plant) 21.87%

分子结构信息

SMILES: C=C1CC23CC1(O)CCC2C1(C=O)CCCC(C)(C(=O)O)C1C3C(=O)O
InChI: InChI=1S/C20H26O6/c1-11-8-19-9-20(11,26)7-4-12(19)18(10-21)6-3-5-17(2,16(24)25)14(18)13(19)15(22)23/h10,12-14,26H,1,3-9H2,2H3,(H,22,23)(H,24,25)/t12-,13+,14+,17+,18+,19-,20-/m0/s1

描述信息

Gibberellin A19 (GA19) belongs to the class of organic compounds known as C20-gibberellin 6-carboxylic acids. These are C20-gibberellins with a carboxyl group at the 6-position. Thus, gibberellin A19 is considered to be an isoprenoid lipid molecule. Gibberellin A19 is found in apple. Gibberellin A19 is a constituent of moso bamboo shoots (Phyllostachys edulis).
Constituent of moso bamboo shoots (Phyllostachys edulis). Gibberellin A19 is found in many foods, some of which are swede, devilfish, vanilla, and canola.
D006133 - Growth Substances > D010937 - Plant Growth Regulators > D005875 - Gibberellins

同义名列表

11 个代谢物同义名

(1S,2S,3S,4R,8R,9R,12S)-8-formyl-12-hydroxy-4-methyl-13-methylidenetetracyclo[10.2.1.0^{1,9}.0^{3,8}]pentadecane-2,4-dicarboxylic acid; (1S,2S,4R,8R,9R,12S)-8-formyl-12-hydroxy-4-methyl-13-methylidenetetracyclo[10.2.1.01,9.03,8]pentadecane-2,4-dicarboxylic acid; (1alpha,4aalpha,4bbeta,10beta)-4a-Formyl-7-hydroxy-1-methyl-8-methylenegibbane-1,10-dicarboxylic acid; (1α,4aα,4bβ,10β)-4a-Formyl-7-hydroxy-1-methyl-8-methylenegibbane-1,10-dicarboxylic acid; Gibberellin a(19); Gibberellin GA19; Gibberellin A19; Gibberellin 19; GA19 CPD; GA19; Gibberellin A19



数据库引用编号

23 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

227 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(226)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(1)

PharmGKB(0)

199 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 10 ACY3, CAT, EIF3M, HPGDS, PFDN6, PGP, TBCB, VCL, XDH, ZNF346
Peripheral membrane protein 4 ACY3, DHDDS, HSD17B6, VCL
Endosome membrane 1 RET
Endoplasmic reticulum membrane 2 DHDDS, HSP90B1
Nucleus 6 BRDT, DLD, HSP90B1, LAMA5, TBCB, ZNF346
cytosol 9 ACY3, CAT, EIF3M, GDA, HPGDS, HSP90B1, TBCB, VCL, XDH
dendrite 1 RET
nucleoplasm 2 HPGDS, ZNF346
Cell membrane 3 ITGAM, RET, VCL
Cytoplasmic side 1 VCL
Early endosome membrane 1 HSD17B6
Multi-pass membrane protein 1 GDA
cell cortex 1 TBCB
cell surface 1 ITGAM
glutamatergic synapse 1 LAMA5
mitochondrial inner membrane 1 GDA
neuromuscular junction 1 LAMA5
neuronal cell body 1 RET
sarcolemma 1 VCL
smooth endoplasmic reticulum 1 HSP90B1
acrosomal vesicle 1 DLD
plasma membrane 3 ITGAM, RET, VCL
Membrane 4 CAT, HSP90B1, ITGAM, RET
apical plasma membrane 1 ACY3
axon 1 RET
brush border 1 VCL
extracellular exosome 6 ACY3, CAT, HSP90B1, ITGAM, LAMA5, VCL
Lumenal side 1 HSD17B6
endoplasmic reticulum 3 DHDDS, HSD17B6, HSP90B1
extracellular space 3 ITGAM, LAMA5, XDH
perinuclear region of cytoplasm 1 HSP90B1
adherens junction 1 VCL
mitochondrion 3 CAT, DLD, GDA
protein-containing complex 4 CAT, EIF3M, HSP90B1, VCL
intracellular membrane-bounded organelle 3 CAT, HPGDS, HSD17B6
Microsome membrane 1 HSD17B6
Single-pass type I membrane protein 2 ITGAM, RET
extracellular region 4 CAT, HSP90B1, LAMA5, VCL
Mitochondrion matrix 1 DLD
mitochondrial matrix 2 CAT, DLD
motile cilium 1 DLD
external side of plasma membrane 1 ITGAM
Extracellular vesicle 1 VCL
microtubule cytoskeleton 1 TBCB
nucleolus 2 PNMA3, ZNF346
midbody 1 HSP90B1
Early endosome 1 RET
cell-cell junction 1 VCL
Apical cell membrane 1 ACY3
Cell membrane, sarcolemma 1 VCL
Mitochondrion inner membrane 1 GDA
Membrane raft 2 ITGAM, VCL
Cell junction, focal adhesion 1 VCL
Cytoplasm, cytoskeleton 2 TBCB, VCL
focal adhesion 3 CAT, HSP90B1, VCL
Cell junction, adherens junction 1 VCL
zonula adherens 1 VCL
Peroxisome 2 CAT, XDH
basement membrane 1 LAMA5
sarcoplasmic reticulum 1 XDH
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
collagen-containing extracellular matrix 2 HSP90B1, LAMA5
fascia adherens 1 VCL
receptor complex 1 RET
cell projection 1 VCL
cytoskeleton 1 VCL
Cell projection, podosome 1 VCL
podosome 1 VCL
plasma membrane protein complex 1 RET
Nucleus, nucleolus 2 PNMA3, ZNF346
Cytoplasmic vesicle, secretory vesicle, acrosome 1 DLD
Cell projection, cilium, flagellum 1 DLD
specific granule membrane 1 ITGAM
tertiary granule membrane 1 ITGAM
Melanosome 1 HSP90B1
sperm plasma membrane 1 HSP90B1
plasma membrane raft 1 ITGAM
ficolin-1-rich granule lumen 2 CAT, VCL
secretory granule lumen 2 CAT, VCL
endoplasmic reticulum lumen 1 HSP90B1
eukaryotic 43S preinitiation complex 1 EIF3M
eukaryotic 48S preinitiation complex 1 EIF3M
eukaryotic translation initiation factor 3 complex 1 EIF3M
eukaryotic translation initiation factor 3 complex, eIF3m 1 EIF3M
pyruvate dehydrogenase complex 1 DLD
specific granule lumen 1 VCL
microtubule plus-end 1 TBCB
oxoglutarate dehydrogenase complex 1 DLD
Sarcoplasmic reticulum lumen 1 HSP90B1
costamere 1 VCL
prefoldin complex 1 PFDN6
protein folding chaperone complex 1 PFDN6
RPAP3/R2TP/prefoldin-like complex 1 PFDN6
extracellular matrix of synaptic cleft 1 LAMA5
laminin-10 complex 1 LAMA5
laminin-11 complex 1 LAMA5
laminin-5 complex 1 LAMA5
synaptic cleft 1 LAMA5
cell-substrate junction 1 VCL
terminal web 1 VCL
integrin complex 1 ITGAM
cell-cell contact zone 1 VCL
endocytic vesicle lumen 1 HSP90B1
catalase complex 1 CAT
integrin alphaM-beta2 complex 1 ITGAM
endoplasmic reticulum chaperone complex 1 HSP90B1
acetyltransferase complex 1 DLD
acrosomal matrix 1 DLD
branched-chain alpha-ketoacid dehydrogenase complex 1 DLD
oxoadipate dehydrogenase complex 1 DLD
inner dense plaque of desmosome 1 VCL
outer dense plaque of desmosome 1 VCL
podosome ring 1 VCL
dehydrodolichyl diphosphate synthase complex 1 DHDDS


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