Orcinol (BioDeep_00000000761)

 

Secondary id: BioDeep_00000862903

natural product PANOMIX_OTCML-2023


代谢物信息卡片


InChI=1/C7H8O2/c1-5-2-6(8)4-7(9)3-5/h2-4,8-9H,1H

化学式: C7H8O2 (124.0524)
中文名称: 3,5-二羟基甲苯, 3,5-二羟基甲苯,无水, 地衣酚
谱图信息: 最多检出来源 Viridiplantae(plant) 19.41%

分子结构信息

SMILES: Cc(c1)cc(O)cc(O)1
InChI: InChI=1S/C7H8O2/c1-5-2-6(8)4-7(9)3-5/h2-4,8-9H,1H3

描述信息

Orcinol is a 5-alkylresorcinol in which the alkyl group is specified as methyl. It has a role as an Aspergillus metabolite. It is a 5-alkylresorcinol and a dihydroxytoluene.
Orcinol is a natural product found in Calluna vulgaris, Rumex patientia, and other organisms with data available.
A 5-alkylresorcinol in which the alkyl group is specified as methyl.
D019995 - Laboratory Chemicals > D007202 - Indicators and Reagents
relative retention time with respect to 9-anthracene Carboxylic Acid is 0.272
relative retention time with respect to 9-anthracene Carboxylic Acid is 0.266
relative retention time with respect to 9-anthracene Carboxylic Acid is 0.263
KEIO_ID O013

同义名列表

37 个代谢物同义名

InChI=1/C7H8O2/c1-5-2-6(8)4-7(9)3-5/h2-4,8-9H,1H; 4-06-00-05892 (Beilstein Handbook Reference); 5-methylbenzene-1,3-diol;Orcinol; 5-Methylresorcinol, anhydrous; 1,3-Dihydroxy-5-methylbenzene; 5-Methyl-1,3-dihydroxybenzene; 1,5-DIHYDROXY-3-METHYLBENZENE; 5-Methylresorcinol anhydrous; Orcinol, 5-methylresorcinol; 1,3-Benzenediol, 5-methyl-; 5-Methyl-benzene-1,3-diol; 5-Methyl-1,3-benzenediol; 5-methylbenzene-1,3-diol; 3-Hydroxy-5-methylphenol; orcinol, 14C-labeled cpd; 5-methylbenzen-1,3-diol; resorcinol monohydrate; 3,5-Dihydroxy-toluene; Resorcinol, 5-methyl-; 3,5-ToluenediolOrcin; 3,5-dihydroxytoluene; 5-methyl-resorcinol; 5-Methyl Resorcinol; 5-methylresorcinol; 5-Methylresorcin; 3,5-Toluenediol; Orcinol, 97\\%; WLN: QR CQ E1; ORCINOL [MI]; AI3-23954; Oricinol; Orcinol; Orcine; Orcin; orzin; Orcinol; Orcinol



数据库引用编号

31 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(0)

代谢反应

77 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(2)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(75)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

99 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 9 ALOX5, BDNF, CNR1, CNR2, CTH, ELANE, PIK3C3, PTGS2, TYR
Peripheral membrane protein 4 ACHE, ALOX5, COQ10A, PTGS2
Endoplasmic reticulum membrane 1 PTGS2
Cytoplasmic vesicle, autophagosome 1 PIK3C3
Nucleus 1 ACHE
autophagosome 1 PIK3C3
cytosol 4 ALOX5, CTH, ELANE, PIK3C3
dendrite 2 BDNF, CNR2
phagocytic vesicle 1 ELANE
phosphatidylinositol 3-kinase complex, class III 1 PIK3C3
nucleoplasm 1 ALOX5
Cell membrane 3 ACHE, CNR1, ITPRIP
Cell projection, axon 1 CNR1
Multi-pass membrane protein 2 CNR1, SLC25A13
Golgi apparatus membrane 1 POMGNT1
Synapse 2 ACHE, TAC1
cell surface 3 ACHE, APOH, ELANE
glutamatergic synapse 2 CNR1, PIK3C3
Golgi apparatus 3 ACHE, AHSG, POMGNT1
Golgi membrane 1 POMGNT1
growth cone 1 CNR1
lysosomal membrane 1 GAA
mitochondrial inner membrane 2 COQ10A, SLC25A13
neuromuscular junction 1 ACHE
neuronal cell body 1 TAC1
presynaptic membrane 1 CNR1
synaptic vesicle 1 BDNF
Cytoplasm, cytosol 1 ALOX5
Lysosome 2 GAA, TYR
Presynapse 1 CNR1
endosome 1 PIK3C3
plasma membrane 7 ACHE, CNR1, CNR2, CTH, GAA, ITPRIP, SLC25A13
Membrane 7 ACHE, BDNF, CTH, GAA, ITPRIP, PIK3C3, POMGNT1
axon 3 BDNF, CNR1, TAC1
caveola 1 PTGS2
extracellular exosome 6 AHSG, APOH, CTH, ELANE, GAA, LYZ
Lysosome membrane 1 GAA
endoplasmic reticulum 2 CNR2, PTGS2
extracellular space 8 ACHE, AHSG, ALOX5, APOH, BDNF, ELANE, LYZ, TAC1
lysosomal lumen 1 GAA
perinuclear region of cytoplasm 4 ACHE, ALOX5, BDNF, TYR
mitochondrion 2 COQ10A, SLC25A13
protein-containing complex 1 PTGS2
intracellular membrane-bounded organelle 2 GAA, TYR
Microsome membrane 1 PTGS2
Single-pass type I membrane protein 3 CTH, ITPRIP, TYR
Secreted 5 ACHE, AHSG, APOH, BDNF, GAA
extracellular region 10 ACHE, AHSG, ALOX5, APOH, BDNF, ELANE, ELN, GAA, LYZ, TAC1
Mitochondrion outer membrane 1 CNR1
mitochondrial outer membrane 1 CNR1
Extracellular side 1 ACHE
Nucleus membrane 1 ALOX5
nuclear membrane 1 ALOX5
Secreted, extracellular space, extracellular matrix 1 ELN
chylomicron 1 APOH
high-density lipoprotein particle 1 APOH
very-low-density lipoprotein particle 1 APOH
actin cytoskeleton 1 CNR1
perikaryon 1 CNR2
Melanosome membrane 1 TYR
midbody 1 PIK3C3
Golgi-associated vesicle 1 TYR
Single-pass type II membrane protein 1 POMGNT1
postsynaptic membrane 1 CNR2
Cytoplasm, perinuclear region 1 ALOX5
Mitochondrion inner membrane 2 COQ10A, SLC25A13
Matrix side 1 COQ10A
Membrane raft 1 CNR1
GABA-ergic synapse 2 CNR1, PIK3C3
extracellular matrix 2 AHSG, ELN
Peroxisome 1 PIK3C3
basement membrane 1 ACHE
Mitochondrion intermembrane space 1 SLC25A13
mitochondrial intermembrane space 1 SLC25A13
collagen-containing extracellular matrix 4 AHSG, APOH, ELANE, ELN
secretory granule 1 ELANE
axoneme 1 PIK3C3
Nucleus inner membrane 1 PTGS2
Nucleus outer membrane 2 ITPRIP, PTGS2
nuclear inner membrane 1 PTGS2
nuclear outer membrane 2 ITPRIP, PTGS2
Late endosome 1 PIK3C3
neuron projection 1 PTGS2
phagocytic vesicle membrane 1 PIK3C3
blood microparticle 1 AHSG
Lipid-anchor, GPI-anchor 1 ACHE
nuclear envelope 1 ALOX5
Nucleus envelope 1 ALOX5
phagophore assembly site 1 PIK3C3
phosphatidylinositol 3-kinase complex, class III, type I 1 PIK3C3
phosphatidylinositol 3-kinase complex, class III, type II 1 PIK3C3
Cell projection, dendrite 1 CNR2
tertiary granule membrane 1 GAA
Melanosome 1 TYR
side of membrane 1 ACHE
ficolin-1-rich granule lumen 1 ALOX5
secretory granule lumen 2 AHSG, ALOX5
endoplasmic reticulum lumen 3 AHSG, BDNF, PTGS2
nuclear matrix 1 ALOX5
transcription repressor complex 1 ELANE
platelet alpha granule lumen 1 AHSG
specific granule lumen 2 ELANE, LYZ
tertiary granule lumen 1 LYZ
azurophil granule membrane 1 GAA
azurophil granule lumen 2 ELANE, LYZ
presynaptic endosome 1 PIK3C3
Nucleus matrix 1 ALOX5
nuclear envelope lumen 1 ALOX5
extrinsic component of cytoplasmic side of plasma membrane 1 CNR2
synaptic cleft 1 ACHE
ficolin-1-rich granule membrane 1 GAA
Cytoplasmic vesicle, phagosome 1 ELANE
postsynaptic endosome 1 PIK3C3
elastic fiber 1 ELN
platelet dense granule lumen 1 APOH
Autolysosome 1 PIK3C3
Nucleus intermembrane space 1 ALOX5
autolysosome lumen 1 GAA
[Isoform H]: Cell membrane 1 ACHE
[Neurotrophic factor BDNF precursor form]: Secreted 1 BDNF


文献列表

  • Chenxia Lian, Wan Gong, Xuan Zhao, Peng Sun, Sijing Hu, Guifen Zhou, Qiaoyan Zhang, Luping Qin. Orcinol gentiobioside inhibits RANKL-induced osteoclastogenesis by promoting apoptosis and suppressing autophagy via the JNK1 signaling. Journal of ethnopharmacology. 2024 Jun; 328(?):118060. doi: 10.1016/j.jep.2024.118060. [PMID: 38521429]
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  • Wan Gong, Mengqin Liu, Qi Zhang, Quanlong Zhang, Yang Wang, Qiming Zhao, Lu Xiang, Chengjian Zheng, Qiaoyan Zhang, Luping Qin. Orcinol Glucoside Improves Senile Osteoporosis through Attenuating Oxidative Stress and Autophagy of Osteoclast via Activating Nrf2/Keap1 and mTOR Signaling Pathway. Oxidative medicine and cellular longevity. 2022; 2022(?):5410377. doi: 10.1155/2022/5410377. [PMID: 35585885]
  • Junlong Li, Pingya He, Jian Zhang, Ning Li. Orcinol glucoside improves the depressive-like behaviors of perimenopausal depression mice through modulating activity of hypothalamic-pituitary-adrenal/ovary axis and activating BDNF- TrkB-CREB signaling pathway. Phytotherapy research : PTR. 2021 Oct; 35(10):5795-5807. doi: 10.1002/ptr.7237. [PMID: 34382261]
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  • Xinying Zhou, Zezheng Liu, Bin Huang, Huibo Yan, Changsheng Yang, Qingchu Li, Dadi Jin. Orcinol glucoside facilitates the shift of MSC fate to osteoblast and prevents adipogenesis via Wnt/β-catenin signaling pathway. Drug design, development and therapy. 2019; 13(?):2703-2713. doi: 10.2147/dddt.s208458. [PMID: 31496649]
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