calactin (BioDeep_00000007016)

   

PANOMIX_OTCML-2023 natural product


代谢物信息卡片


Pecilocerin B

化学式: C29H40O9 (532.2672)
中文名称:
谱图信息: 最多检出来源 Chinese Herbal Medicine(otcml) 98.81%

分子结构信息

SMILES: C1[C@@]2([H])O[C@@]3(O)[C@H](O)C[C@@H](C)O[C@@]3([H])O[C@]2([H])C[C@]2([H])CC[C@@]3([H])[C@]4(CC[C@H](C5=CC(=O)OC5)[C@@]4(C)CC[C@]3([H])[C@@]12C=O)O
InChI: InChI=1S/C29H40O9/c1-15-9-23(31)29(34)25(36-15)37-21-11-17-3-4-20-19(27(17,14-30)12-22(21)38-29)5-7-26(2)18(6-8-28(20,26)33)16-10-24(32)35-13-16/h10,14-15,17-23,25,31,33-34H,3-9,11-13H2,1-2H3/t15-,17+,18-,19+,20-,21-,22-,23-,25+,26-,27-,28+,29+/m1/s1

描述信息

同义名列表

4 个代谢物同义名

calactin; Pecilocerin B; NSC650471; Calactin



数据库引用编号

16 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

49 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 12 ANXA5, BCL2, CASP3, CASP8, CASP9, CCNB1, CDC25C, CDK1, CHEK2, DCTN4, INA, ITK
Peripheral membrane protein 1 ANXA5
Endoplasmic reticulum membrane 2 BCL2, CDK1
Nucleus 12 BCL2, CASP3, CASP8, CASP9, CCNB1, CDC25C, CDK1, CHEK2, DCTN4, H2AX, ITK, PARP1
autophagosome 1 MAP1LC3A
cytosol 12 ANXA5, BCL2, CASP3, CASP8, CASP9, CCNB1, CDC25C, CDK1, DCTN4, ITK, MAP1LC3A, PARP1
nuclear body 1 PARP1
centrosome 4 CCNB1, CDK1, DCTN4, H2AX
nucleoplasm 9 ATP2B1, CASP3, CASP8, CCNB1, CDC25C, CDK1, CHEK2, H2AX, PARP1
Cell membrane 2 ATP2B1, TNF
Lipid-anchor 1 MAP1LC3A
lamellipodium 1 CASP8
Multi-pass membrane protein 1 ATP2B1
Synapse 1 ATP2B1
cell cortex 1 DCTN4
cell surface 1 TNF
glutamatergic synapse 3 ATP2B1, CASP3, MAP1LC3A
Golgi apparatus 1 CHEK2
neuronal cell body 2 CASP3, TNF
presynaptic membrane 1 ATP2B1
sarcolemma 1 ANXA5
Cytoplasm, cytosol 1 PARP1
plasma membrane 3 ATP2B1, ITK, TNF
synaptic vesicle membrane 1 ATP2B1
Membrane 6 ANXA5, ATP2B1, BCL2, CCNB1, CDK1, PARP1
basolateral plasma membrane 1 ATP2B1
extracellular exosome 4 ANXA5, ATP2B1, CDK1, H2AX
endoplasmic reticulum 1 BCL2
extracellular space 5 IL17A, IL2, INA, MMP1, TNF
perinuclear region of cytoplasm 1 CDC25C
Schaffer collateral - CA1 synapse 1 INA
mitochondrion 5 BCL2, CASP8, CASP9, CDK1, PARP1
protein-containing complex 4 BCL2, CASP8, CASP9, PARP1
intracellular membrane-bounded organelle 2 ATP2B1, MAP1LC3A
postsynaptic density 1 CASP3
Secreted 2 IL17A, IL2
extracellular region 5 ANXA5, IL17A, IL2, MMP1, TNF
Mitochondrion outer membrane 1 BCL2
Single-pass membrane protein 1 BCL2
mitochondrial outer membrane 2 BCL2, CASP8
mitochondrial matrix 2 CCNB1, CDK1
transcription regulator complex 1 PARP1
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 2 CDK1, DCTN4
Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane 1 ATP2B1
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
external side of plasma membrane 3 ANXA5, IL17A, TNF
Secreted, extracellular space, extracellular matrix 1 MMP1
nucleolus 1 PARP1
midbody 1 CDK1
cell-cell junction 1 ITK
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
Cell projection, lamellipodium 1 CASP8
Membrane raft 1 TNF
pore complex 1 BCL2
Cytoplasm, cytoskeleton 2 DCTN4, MAP1LC3A
focal adhesion 2 ANXA5, DCTN4
microtubule 1 MAP1LC3A
extracellular matrix 1 MMP1
PML body 1 CHEK2
mitochondrial intermembrane space 1 CDC25C
collagen-containing extracellular matrix 1 ANXA5
intermediate filament 1 INA
lateral plasma membrane 1 ATP2B1
nuclear speck 1 H2AX
Cytoplasm, myofibril, sarcomere 1 DCTN4
Late endosome 1 MAP1LC3A
sarcomere 1 DCTN4
Zymogen granule membrane 1 ANXA5
chromatin 1 PARP1
Cytoplasmic vesicle, autophagosome membrane 1 MAP1LC3A
autophagosome membrane 1 MAP1LC3A
cell projection 1 ATP2B1
phagocytic cup 1 TNF
mitotic spindle 1 CDK1
Chromosome 2 H2AX, PARP1
cytoskeleton 1 CASP8
cytoplasmic ribonucleoprotein granule 1 INA
Nucleus, nucleolus 1 PARP1
spindle pole 2 CCNB1, DCTN4
nuclear replication fork 1 PARP1
chromosome, telomeric region 2 CDK1, PARP1
Cytoplasm, cell cortex 1 DCTN4
Basolateral cell membrane 1 ATP2B1
organelle membrane 1 MAP1LC3A
site of double-strand break 2 H2AX, PARP1
nuclear envelope 1 PARP1
Endomembrane system 1 MAP1LC3A
Presynaptic cell membrane 1 ATP2B1
cell body 1 CASP8
replication fork 1 H2AX
myelin sheath 1 BCL2
stress fiber 1 DCTN4
male germ cell nucleus 1 H2AX
dynactin complex 1 DCTN4
kinetochore 1 DCTN4
XY body 1 H2AX
immunological synapse 1 ATP2B1
cytoplasmic dynein complex 1 DCTN4
apoptosome 1 CASP9
condensed nuclear chromosome 1 H2AX
outer kinetochore 1 CCNB1
neurofilament 1 INA
vesicle membrane 1 ANXA5
Cytoplasm, cytoskeleton, stress fiber 1 DCTN4
protein-DNA complex 1 PARP1
spindle microtubule 1 CDK1
CD95 death-inducing signaling complex 1 CASP8
death-inducing signaling complex 2 CASP3, CASP8
ripoptosome 1 CASP8
nucleosome 1 H2AX
site of DNA damage 2 H2AX, PARP1
cyclin-dependent protein kinase holoenzyme complex 1 CDK1
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
Autolysosome 1 MAP1LC3A
cyclin A1-CDK1 complex 1 CDK1
cyclin A2-CDK1 complex 1 CDK1
cyclin B1-CDK1 complex 2 CCNB1, CDK1
postsynaptic intermediate filament cytoskeleton 1 INA
endothelial microparticle 1 ANXA5
[Poly [ADP-ribose] polymerase 1, processed N-terminus]: Chromosome 1 PARP1
[Poly [ADP-ribose] polymerase 1, processed C-terminus]: Cytoplasm 1 PARP1
BAD-BCL-2 complex 1 BCL2
photoreceptor ribbon synapse 1 ATP2B1
caspase complex 1 CASP9
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Seyed Hamzeh Hosseini, Milena Masullo, Antonietta Cerulli, Stefania Martucciello, Mahdi Ayyari, Cosimo Pizza, Sonia Piacente. Antiproliferative Cardenolides from the Aerial Parts of Pergularia tomentosa. Journal of natural products. 2019 01; 82(1):74-79. doi: 10.1021/acs.jnatprod.8b00630. [PMID: 30629433]
  • Chien-Chih Lee, Yi-Hsiung Lin, Wen-Hsin Chang, Yang-Chang Wu, Jan-Gowth Chang. The small molecule calactin induces DNA damage and apoptosis in human leukemia cells. European journal of cancer prevention : the official journal of the European Cancer Prevention Organisation (ECP). 2012 Sep; 21(5):467-73. doi: 10.1097/cej.0b013e3283498e66. [PMID: 22828439]
  • Albert A Baskar, Savarimuthu Ignacimuthu, Gabriel M Paulraj, Khalid S Al Numair. Chemopreventive potential of beta-Sitosterol in experimental colon cancer model--an in vitro and In vivo study. BMC complementary and alternative medicine. 2010 Jun; 10(?):24. doi: 10.1186/1472-6882-10-24. [PMID: 20525330]
  • N R Rathod, I Raghuveer, H R Chitme, R Chandra. Free Radical Scavenging Activity of Calotropis gigantea on Streptozotocin-Induced Diabetic Rats. Indian journal of pharmaceutical sciences. 2009 Nov; 71(6):615-21. doi: 10.4103/0250-474x.59542. [PMID: 20376213]
  • Sonia Piacente, Milena Masullo, Nancy De Nève, Janique Dewelle, Arafa Hamed, Robert Kiss, Tatjana Mijatovic. Cardenolides from Pergularia tomentosa display cytotoxic activity resulting from their potent inhibition of Na+/K+-ATPase. Journal of natural products. 2009 Jun; 72(6):1087-91. doi: 10.1021/np800810f. [PMID: 19555122]
  • Jun-Zhu Li, Chen Qing, Chang-Xiang Chen, Xiao-Jiang Hao, Hai-Yang Liu. Cytotoxicity of cardenolides and cardenolide glycosides from Asclepias curassavica. Bioorganic & medicinal chemistry letters. 2009 Apr; 19(7):1956-9. doi: 10.1016/j.bmcl.2009.02.045. [PMID: 19251412]
  • Arafa I Hamed, Alberto Plaza, Maria Luisa Balestrieri, Usama A Mahalel, Irina V Springuel, Wieslaw Oleszek, Cosimo Pizza, Sonia Piacente. Cardenolide glycosides from Pergularia tomentosa and their proapoptotic activity in Kaposi's sarcoma cells. Journal of natural products. 2006 Sep; 69(9):1319-22. doi: 10.1021/np060228l. [PMID: 16989527]
  • Thitima Lhinhatrakool, Somyote Sutthivaiyakit. 19-Nor- and 18,20-epoxy-cardenolides from the leaves of Calotropis gigantea. Journal of natural products. 2006 Aug; 69(8):1249-51. doi: 10.1021/np060249f. [PMID: 16933890]
  • Michael C Roy, Fang-Rong Chang, Hsiao-Chu Huang, Michael Y-N Chiang, Yang-Chang Wu. Cytotoxic principles from the formosan milkweed, Asclepias curassavica. Journal of natural products. 2005 Oct; 68(10):1494-9. doi: 10.1021/np0501740. [PMID: 16252914]
  • S Bhattacharya, S Ghosh, S Chakraborty, A K Bera, B P Mukhopadhayay, I Dey, A Banerjee. Insight to structural subsite recognition in plant thiol protease-inhibitor complexes : understanding the basis of differential inhibition and the role of water. BMC structural biology. 2001; 1(?):4. doi: 10.1186/1472-6807-1-4. [PMID: 11602025]