alpha-Copaene (BioDeep_00000004160)

 

Secondary id: BioDeep_00001029049

natural product human metabolite PANOMIX_OTCML-2023 Endogenous


代谢物信息卡片


TRICYCLO(4.4.0.02,7)DEC-3-ENE, 1,3-DIMETHYL-8-(1-METHYLETHYL)-, (1R,2S,6S,7S,8S)-

化学式: C15H24 (204.1878)
中文名称: (-)-Alpha-蒎烯, α-芴烯, ALPHA-蒎烯
谱图信息: 最多检出来源 Homo sapiens(feces) 47.77%

分子结构信息

SMILES: CC(C)[C@@H]1CC[C@@]2(C)[C@H]3CC=C(C)C2[C@@H]13
InChI: InChI=1S/C15H24/c1-9(2)11-7-8-15(4)12-6-5-10(3)14(15)13(11)12/h5,9,11-14H,6-8H2,1-4H3

描述信息

alpha-Copaene, also known as aglaiene, belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. alpha-Copaene is possibly neutral. alpha-Copaene is a spice and woody tasting compound that can be found in several food items such as lime, mandarin orange (clementine, tangerine), safflower, and summer savoury, which makes alpha-copaene a potential biomarker for the consumption of these food products. alpha-Copaene can be found in feces and saliva.
Alpha-copaene, also known as copaene, is a member of the class of compounds known as sesquiterpenoids. Sesquiterpenoids are terpenes with three consecutive isoprene units. Alpha-copaene is a spice and woody tasting compound and can be found in a number of food items such as lime, mandarin orange (clementine, tangerine), safflower, and summer savory, which makes alpha-copaene a potential biomarker for the consumption of these food products. Alpha-copaene can be found primarily in feces and saliva.
8-Isopropyl-1,3-dimethyltricyclo(4.4.0.02,7)dec-3-ene is a natural product found in Pinus sylvestris var. hamata, Asarum gusk, and other organisms with data available.

同义名列表

32 个代谢物同义名

TRICYCLO(4.4.0.02,7)DEC-3-ENE, 1,3-DIMETHYL-8-(1-METHYLETHYL)-, (1R,2S,6S,7S,8S)-; TRICYCLO(4.4.0.02,7)DEC-3-ENE, 8-ISOPROPYL-1,3-DIMETHYL-, (1R,2S,6S,7S,8S)-(-)-; Tricyclo(4.4.0.0(2,7))dec-3-ene, 1,3-dimethyl-8-(1-methylethyl)-, stereoisomer; (1R,2S,6S,7S,8S)-1,3-dimethyl-8-(propan-2-yl)tricyclo[4.4.0.0^{2,7}]dec-3-ene; (1R,2S,6S,7S,8S)-1,3-Dimethyl-8-(1-methylethyl)tricyclo[4.4.0.02,7]dec-3-ene; (1R,2S,6S,7S,8S)-(-)-8-Isopropyl-1,3-dimethyltricyclo[4.4.0.02,7]dec-3-ene; (1R,2S,6S,7S,8S)-(-)-8-ISOPROPYL-1,3-DIMETHYLTRICYCLO(4.4.0.02,7)DEC-3-ENE; (1R,2S,6S,7S,8S)-8-isopropyl-1,3-dimethyltricyclo[4.4.0.0^{2,7}]dec-3-ene; (1R,2S,6S,7S,8S)-1,3-Dimethyl-8-propan-2-yltricyclo[4.4.0.02,7]dec-3-ene; (1R,2S,7S,8S)-1,3-dimethyl-8-propan-2-yltricyclo[4.4.0.02,7]dec-3-ene; TRICYCLO(4.4.0.02,7)DEC-3-ENE, 8-ISOPROPYL-1,3-DIMETHYL-; 8-Isopropyl-1,3-dimethyltricyclo(4.4.0.02,7)dec-3-ene; 4FB740C8-9DD2-4B6A-A38A-AD843ADB56A5; (-)-.ALPHA.-COPAENE; (-)-alpha-Copaene; COPAENE, .ALPHA.-; UNII-0V56HXQ8N5; .alpha.-Copaene; alpha-Copanene; alpha-copaene; (-)-a-Copaene; (-)-α-Copaene; COPAENE [MI]; (-)-copaene; 0V56HXQ8N5; α-Copanene; α-Copaene; a-copaene; Aglaiene; Copaene; alpha-Copaene; (-)-alpha-Copaene



数据库引用编号

23 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

336 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 12 ACE, ANXA5, ARG1, BCL2, GGPS1, GJA1, HPGDS, MARCKSL1, TSHB, TYR, XDH, ZNF346
Peripheral membrane protein 2 ACHE, ANXA5
Endoplasmic reticulum membrane 2 BCL2, GJA1
Nucleus 7 ACHE, ARG1, BCL2, CBX4, GJA1, MYB, ZNF346
cytosol 8 ANXA5, ARG1, BCL2, GGPS1, GJA1, HPGDS, MYB, XDH
nuclear body 1 CBX4
nucleoplasm 6 CBX4, GGPS1, GJA1, HPGDS, MYB, ZNF346
RNA polymerase II transcription regulator complex 1 MYB
Cell membrane 5 ACE, ACHE, GJA1, ITGB2, MARCKSL1
Lipid-anchor 1 MARCKSL1
Cytoplasmic granule 1 ARG1
Multi-pass membrane protein 1 GJA1
Synapse 1 ACHE
cell junction 1 GJA1
cell surface 2 ACHE, ITGB2
Golgi apparatus 3 ACHE, ATRN, GJA1
Golgi membrane 1 GJA1
lysosomal membrane 1 GAA
neuromuscular junction 1 ACHE
sarcolemma 1 ANXA5
Lysosome 3 ACE, GAA, TYR
endosome 1 ACE
plasma membrane 8 ACE, ACHE, ATRN, BCHE, GAA, GJA1, ITGB2, MARCKSL1
Membrane 7 ACE, ACHE, ANXA5, BCL2, GAA, ITGB2, MYB
apical plasma membrane 1 GJA1
extracellular exosome 6 ACE, ANXA5, ATRN, GAA, ITGB2, MARCKSL1
Lysosome membrane 1 GAA
endoplasmic reticulum 2 BCL2, GJA1
extracellular space 7 ACE, ACHE, ARG1, ATRN, BCHE, TSHB, XDH
lysosomal lumen 1 GAA
perinuclear region of cytoplasm 3 ACHE, GGPS1, TYR
gap junction 1 GJA1
intercalated disc 1 GJA1
mitochondrion 2 BCL2, GJA1
protein-containing complex 1 BCL2
intracellular membrane-bounded organelle 4 GAA, GJA1, HPGDS, TYR
Single-pass type I membrane protein 4 ACE, ATRN, ITGB2, TYR
Secreted 5 ACE, ACHE, BCHE, GAA, TSHB
extracellular region 7 ACE, ACHE, ANXA5, ARG1, BCHE, GAA, TSHB
Mitochondrion outer membrane 1 BCL2
Single-pass membrane protein 1 BCL2
mitochondrial outer membrane 1 BCL2
[Isoform 2]: Secreted 1 ATRN
Extracellular side 1 ACHE
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
external side of plasma membrane 3 ACE, ANXA5, ITGB2
Extracellular vesicle 1 ITGB2
Z disc 1 GGPS1
nucleolus 1 ZNF346
Melanosome membrane 1 TYR
Golgi-associated vesicle 1 TYR
Cytoplasm, perinuclear region 1 GGPS1
Membrane raft 2 GJA1, ITGB2
pore complex 1 BCL2
Cytoplasm, cytoskeleton 1 MARCKSL1
focal adhesion 3 ANXA5, GJA1, ITGB2
Peroxisome 1 XDH
basement membrane 1 ACHE
sarcoplasmic reticulum 1 XDH
collagen-containing extracellular matrix 1 ANXA5
Cell junction, gap junction 1 GJA1
connexin complex 1 GJA1
contractile muscle fiber 1 GJA1
fascia adherens 1 GJA1
intermediate filament 1 GJA1
lateral plasma membrane 1 GJA1
nuclear speck 1 CBX4
receptor complex 1 ITGB2
Zymogen granule membrane 1 ANXA5
cytoskeleton 1 MARCKSL1
brush border membrane 1 ACE
Nucleus, nucleolus 1 ZNF346
blood microparticle 1 BCHE
sperm midpiece 1 ACE
Lipid-anchor, GPI-anchor 1 ACHE
[Isoform 3]: Secreted 1 ATRN
specific granule membrane 1 ITGB2
tertiary granule membrane 2 GAA, ITGB2
Melanosome 1 TYR
Golgi-associated vesicle membrane 1 GJA1
Nucleus speckle 1 CBX4
side of membrane 1 ACHE
myelin sheath 1 BCL2
Cytoplasm, myofibril, sarcomere, Z line 1 GGPS1
basal plasma membrane 1 ACE
plasma membrane raft 1 ITGB2
endoplasmic reticulum lumen 1 BCHE
nuclear matrix 1 MYB
PcG protein complex 1 CBX4
PRC1 complex 1 CBX4
specific granule lumen 1 ARG1
azurophil granule membrane 1 GAA
tight junction 1 GJA1
azurophil granule lumen 1 ARG1
nuclear envelope lumen 1 BCHE
vesicle membrane 1 ANXA5
synaptic cleft 1 ACHE
ficolin-1-rich granule membrane 2 GAA, ITGB2
[Isoform 1]: Cell membrane 1 ATRN
integrin complex 1 ITGB2
cell-cell contact zone 1 GJA1
integrin alphaL-beta2 complex 1 ITGB2
integrin alphaM-beta2 complex 1 ITGB2
integrin alphaX-beta2 complex 1 ITGB2
endothelial microparticle 1 ANXA5
autolysosome lumen 1 GAA
BAD-BCL-2 complex 1 BCL2
[Angiotensin-converting enzyme, soluble form]: Secreted 1 ACE
[Isoform Testis-specific]: Cell membrane 1 ACE
[Isoform H]: Cell membrane 1 ACHE


文献列表

  • Faizan Abul Qais, Mohammad Shavez Khan, Iqbal Ahmad, Fohad Mabood Husain, Mohammed Arshad, Altaf Khan, Mohd Adil. Modulation of quorum sensing and biofilm of Gram-negative bacterial pathogens by Cinnamomum zeylanicum L. Microscopy research and technique. 2023 Sep; ?(?):. doi: 10.1002/jemt.24410. [PMID: 37660303]
  • Lekshmi N Menon, P S Shameer, Jatindra Sarma, K B Rameshkumar. Profiles of volatile chemicals from the leaves of six Garcinia species from North East India. Natural product research. 2021 Jul; 35(13):2269-2273. doi: 10.1080/14786419.2019.1667349. [PMID: 31542951]
  • Mozaniel Santana de Oliveira, Jorddy Neves Cruz, Oberdan Oliveira Ferreira, Daniel Santiago Pereira, Natanael Santiago Pereira, Marcos Enê Chaves Oliveira, Giorgio Cristino Venturieri, Giselle Maria Skelding Pinheiro Guilhon, Antônio Pedro da Silva Souza Filho, Eloisa Helena de Aguiar Andrade. Chemical Composition of Volatile Compounds in Apis mellifera Propolis from the Northeast Region of Pará State, Brazil. Molecules (Basel, Switzerland). 2021 Jun; 26(11):. doi: 10.3390/molecules26113462. [PMID: 34200300]
  • Wen-Nee Tan, Zi-Hui Tan, Nurul Izzati Zulkifli, Nik Nur Syazni Nik Mohamed Kamal, Nur Amiera Syuhada Rozman, Woei-Yenn Tong, Chean-Ring Leong, Jun-Wei Lim. Sesquiterpenes rich essential oil from Garcinia celebica L. and its cytotoxic and antimicrobial activities. Natural product research. 2020 Dec; 34(23):3404-3408. doi: 10.1080/14786419.2019.1569012. [PMID: 30773054]
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  • Nídia Cristiane Yoshida, Francis Paes Saffran, William Gustavo Lima, Talita Vilalva Freire, João Máximo de Siqueira, Walmir Silva Garcez. Chemical characterization and bioherbicidal potential of the essential oil from the leaves of Unonopsis guatterioides (A.DC.) R.E.Fr. (Annonaceae). Natural product research. 2019 Nov; 33(22):3312-3316. doi: 10.1080/14786419.2018.1472595. [PMID: 29741113]
  • Alline L B Dias, Hellen R F Batista, Elisângela B B Estevam, Cassia C F Alves, Moacir R Forim, Heloiza D Nicolella, Ricardo A Furtado, Denise C Tavares, Thayna S Silva, Carlos H G Martins, Mayker L D Miranda. Chemical composition and in vitro antibacterial and antiproliferative activities of the essential oil from the leaves of Psidium myrtoides O. Berg (Myrtaceae). Natural product research. 2019 Sep; 33(17):2566-2570. doi: 10.1080/14786419.2018.1457664. [PMID: 29611435]
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  • Ling Chuang, Chi-Hsiang Wen, Yi-Ru Lee, Yan-Liang Lin, Li-Ren Hsu, Sheng-Yang Wang, Fang-Hua Chu. Identification, Functional Characterization, and Seasonal Expression Patterns of Five Sesquiterpene Synthases in Liquidambar formosana. Journal of natural products. 2018 05; 81(5):1162-1172. doi: 10.1021/acs.jnatprod.7b00773. [PMID: 29746128]
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  • Paul E Kendra, David Owens, Wayne S Montgomery, Teresa I Narvaez, Gary R Bauchan, Elena Q Schnell, Nurhayat Tabanca, Daniel Carrillo. α-Copaene is an attractant, synergistic with quercivorol, for improved detection of Euwallacea nr. fornicatus (Coleoptera: Curculionidae: Scolytinae). PloS one. 2017; 12(6):e0179416. doi: 10.1371/journal.pone.0179416. [PMID: 28609448]
  • Paul E Kendra, Wayne S Montgomery, Elena Q Schnell, Mark A Deyrup, Nancy D Epsky. Efficacy of α-Copaene, Cubeb, and Eucalyptol Lures for Detection of Redbay Ambrosia Beetle (Coleoptera: Curculionidae: Scolytinae). Journal of economic entomology. 2016 12; 109(6):2428-2435. doi: 10.1093/jee/tow214. [PMID: 27986939]
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  • Bárbara Moreno-Murillo, Clara Quijano-Célis, Arturo R Romero, Jorge A Pino. Essential oil from leaves of Lippia dulcis grown in Colombia. Natural product communications. 2010 Apr; 5(4):613-4. doi: . [PMID: 20433082]
  • José G Sena Filho, Haroudo S Xavier, José M Barbosa Filho, Jennifer M Duringer. A chemical marker proposal for the Lantana genus: composition of the essential oils from the leaves of Lantana radula and L. canescens. Natural product communications. 2010 Apr; 5(4):635-40. doi: . [PMID: 20433088]
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