cis-Ocimene (BioDeep_00000019568)

 

Secondary id: BioDeep_00000007652, BioDeep_00000284687, BioDeep_00000603213, BioDeep_00000638328, BioDeep_00001868491, BioDeep_00001872019

human metabolite PANOMIX_OTCML-2023 Endogenous


代谢物信息卡片


(Z)-3,7-dimethylocta-1,3,6,-triene

化学式: C10H16 (136.1252)
中文名称: 罗勒烯(异构体混合物), （E）-β-蝾蚣烯, (Z)-3,7-二甲基-1,3,6-十八烷三烯, （Z） -β-榄香烯
谱图信息: 最多检出来源 Viridiplantae(plant) 18.1%

分子结构信息

SMILES: C(=C(\C=C)/C)\CC=C(C)C
InChI: InChI=1S/C10H16/c1-5-10(4)8-6-7-9(2)3/h5,7-8H,1,6H2,2-4H3

描述信息

Ocimene refers to several isomeric hydrocarbons. The ocimenes are monoterpenes found within a variety of plants and fruits. alpha-Ocimene and the two beta-ocimenes differ in the position of the isolated double bond: it is terminal in the alpha isomer. alpha-Ocimene is 3,7-dimethyl-1,3,7-octatriene. beta-Ocimene is 3,7-dimethyl-1,3,6-octatriene. beta-Ocimene exists in two stereoisomeric forms, cis and trans, with respect to the central double bond. The ocimenes are often found naturally as mixtures of the various forms. The mixture (as well as the pure compounds) is an oil with a pleasant odor. It is used in perfumery. cis-beta-Ocimene is found in many foods, some of which are cornmint, sweet orange, sweet basil, and common sage.
cis-Ocimene is found in allspice. Ocimene refers to several isomeric hydrocarbons. The ocimenes are monoterpenes found within a variety of plants and fruits. alpha-Ocimene and the two beta-ocimenes differ in the position of the isolated double bond: it is terminal in the alpha isomer. alpha-Ocimene is 3,7-dimethyl-1,3,7-octatriene. beta-Ocimene is 3,7-dimethyl-1,3,6-octatriene. beta-Ocimene exists in two stereoisomeric forms, cis and trans, with respect to the central double bond. The ocimenes are often found naturally as mixtures of the various forms. The mixture (as well as the pure compounds) is an oil with a pleasant odor. It is used in perfumery. (Wikipedia

同义名列表

32 个代谢物同义名

(Z)-3,7-dimethylocta-1,3,6,-triene; 3,7-Dimethyl-(3Z)-1,3,6-octatriene; (3Z)-3,7-dimethylocta-1,3,6-triene; (3Z)-3,7-Dimethyl-1,3,6-octatriene; cis-3,7-Dimethyl-1,3,6-octatriene; (Z)-3,7-Dimethyl-1,3,6-octatriene; 3,7-Dimethyl-(Z)-1,3,6-octatriene; beta-OCIMENE, (3E)-; beta-Ocimene, (3Z)-; cis-β-ocimene; cis-beta -Ocimene; beta -(Z)-Ocimene; beta -cis-Ocimene; beta-cis-Ocimene; (Z)-beta-ocimene; cis-beta-Ocimene; Z-beta -Ocimene; Z-beta-Ocimene; cis-Β-ocimene; b-cis-Ocimene; (Z)-β-ocimene; (Z)-b-Ocimene; cis-b-Ocimene; Β-cis-ocimene; beta-Ocimene; (Z)-ocimene; cis-Ocimene; Z-Ocimene; (E)-beta-Ocimene; (Z)-beta-Ocimene; (E)-beta-ocimene; beta-Ocimene



数据库引用编号

27 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(1)

代谢反应

10 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(2)

WikiPathways(0)

Plant Reactome(3)

INOH(0)

PlantCyc(5)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

410 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 9 CAT, ELANE, FDPS, GGPS1, HBS1L, KHK, PTGS2, TYR, XDH
Peripheral membrane protein 2 ACHE, PTGS2
Endoplasmic reticulum membrane 2 HMGCR, PTGS2
Nucleus 2 ACHE, MYB
cytosol 9 CAT, ELANE, FDPS, GGPS1, GSR, HBS1L, KHK, MYB, XDH
phagocytic vesicle 1 ELANE
nucleoplasm 3 FDPS, GGPS1, MYB
RNA polymerase II transcription regulator complex 1 MYB
Cell membrane 2 ACHE, TNF
Multi-pass membrane protein 3 CACNA1I, HMGCR, KCNA3
Synapse 1 ACHE
cell surface 3 ACHE, ELANE, TNF
glutamatergic synapse 1 KCNA3
Golgi apparatus 2 ACHE, ATRN
lysosomal membrane 1 GAA
neuromuscular junction 1 ACHE
neuronal cell body 1 TNF
presynaptic membrane 1 KCNA3
Lysosome 2 GAA, TYR
plasma membrane 8 ACHE, ATRN, BCHE, BTN1A1, CACNA1I, GAA, KCNA3, TNF
Membrane 10 ACHE, BTN1A1, CACNA1I, CAT, FDPS, GAA, HBS1L, HMGCR, KCNA3, MYB
axon 1 KCNA3
caveola 1 PTGS2
extracellular exosome 7 ATRN, CAT, ELANE, GAA, GSR, HBS1L, KHK
Lysosome membrane 1 GAA
endoplasmic reticulum 2 HMGCR, PTGS2
extracellular space 7 ACHE, ATRN, BCHE, BTN1A1, ELANE, TNF, XDH
lysosomal lumen 1 GAA
perinuclear region of cytoplasm 4 ACHE, GGPS1, KCNA3, TYR
mitochondrion 2 CAT, GSR
protein-containing complex 2 CAT, PTGS2
intracellular membrane-bounded organelle 3 CAT, GAA, TYR
Microsome membrane 1 PTGS2
Single-pass type I membrane protein 3 ATRN, BTN1A1, TYR
Secreted 3 ACHE, BCHE, GAA
extracellular region 6 ACHE, BCHE, CAT, ELANE, GAA, TNF
[Isoform 2]: Secreted 1 ATRN
mitochondrial matrix 3 CAT, FDPS, GSR
Extracellular side 1 ACHE
external side of plasma membrane 3 BTN1A1, GSR, TNF
Z disc 1 GGPS1
Melanosome membrane 1 TYR
Golgi-associated vesicle 1 TYR
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
postsynaptic membrane 1 KCNA3
Cytoplasm, perinuclear region 1 GGPS1
Membrane raft 2 KCNA3, TNF
focal adhesion 1 CAT
Peroxisome 3 CAT, FDPS, XDH
basement membrane 1 ACHE
sarcoplasmic reticulum 1 XDH
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 2 CAT, HMGCR
collagen-containing extracellular matrix 1 ELANE
secretory granule 1 ELANE
Nucleus inner membrane 1 PTGS2
Nucleus outer membrane 1 PTGS2
nuclear inner membrane 1 PTGS2
nuclear outer membrane 1 PTGS2
neuron projection 1 PTGS2
phagocytic cup 1 TNF
blood microparticle 1 BCHE
Lipid-anchor, GPI-anchor 1 ACHE
[Isoform 2]: Cell membrane 1 KCNA3
[Isoform 3]: Secreted 1 ATRN
tertiary granule membrane 1 GAA
Melanosome 1 TYR
side of membrane 1 ACHE
Peroxisome membrane 1 HMGCR
Cytoplasm, myofibril, sarcomere, Z line 1 GGPS1
voltage-gated potassium channel complex 1 KCNA3
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 1 CAT
endoplasmic reticulum lumen 2 BCHE, PTGS2
nuclear matrix 1 MYB
transcription repressor complex 1 ELANE
voltage-gated calcium channel complex 1 CACNA1I
specific granule lumen 1 ELANE
azurophil granule membrane 1 GAA
azurophil granule lumen 1 ELANE
nuclear envelope lumen 1 BCHE
[Isoform 2]: Cytoplasm 1 HBS1L
calyx of Held 1 KCNA3
synaptic cleft 1 ACHE
ficolin-1-rich granule membrane 1 GAA
[Isoform 1]: Cell membrane 2 ATRN, KCNA3
Cytoplasmic vesicle, phagosome 1 ELANE
cytosolic ribosome 1 HBS1L
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
catalase complex 1 CAT
autolysosome lumen 1 GAA
[Isoform 3]: Cytoplasm, perinuclear region 1 KCNA3
[Isoform H]: Cell membrane 1 ACHE
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF
Dom34-Hbs1 complex 1 HBS1L


文献列表

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  • Guo Wei, Yang Xu, Mengmeng Xu, Xinwei Shi, Jianwen Wang, Liguo Feng. Identification of Volatile Compounds and Terpene Synthase (TPS) Genes Reveals ZcTPS02 Involved in β-Ocimene Biosynthesis in Zephyranthes candida. Genes. 2024 Jan; 15(2):. doi: 10.3390/genes15020185. [PMID: 38397175]
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  • Eveleny Tirsa Vaca Meza, Jorge Vasquez-Kool, Noé Ildefonso Costilla Sánchez, Amandio Vieira, Rodney Alexandre Ferreira Rodrigues, Adilson Sartoratto, Angela Del Pilar Flores Granados, Carmen Luisa Marin Tello, Ana Lucia Tasca Gois Ruiz. Chemical composition and anti-proliferative activity of essential oils from some medicinal plants from Cachicadán, Región La Libertad, Perú. Natural product research. 2023 Jul; ?(?):1-6. doi: 10.1080/14786419.2023.2238114. [PMID: 37470420]
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