Xanthomicrol (BioDeep_00000009919)

 

Secondary id: BioDeep_00000862605

human metabolite PANOMIX_OTCML-2023 natural product


代谢物信息卡片


4H-1-Benzopyran-4-one,5-hydroxy-2-(4-hydroxyphenyl)-6,7,8-trimethoxy-

化学式: C18H16O7 (344.0896)
中文名称: 黄姜味草醇
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: c1(c(c(c2c(c1OC)oc(cc2=O)c1ccc(cc1)O)O)OC)OC
InChI: InChI=1S/C18H16O7/c1-22-16-14(21)13-11(20)8-12(9-4-6-10(19)7-5-9)25-15(13)17(23-2)18(16)24-3/h4-8,19,21H,1-3H3

描述信息

Isolated from Citrus sudachi, Mentha piperita, Sideritis subspecies and Thymus subspecies Xanthomicrol is found in many foods, some of which are citrus, herbs and spices, sweet basil, and winter savory.
low.

同义名列表

6 个代谢物同义名

4H-1-Benzopyran-4-one,5-hydroxy-2-(4-hydroxyphenyl)-6,7,8-trimethoxy-; 5-Hydroxy-2-(4-hydroxyphenyl)-6,7,8-trimethoxy-4H-1-benzopyran-4-one; 5-hydroxy-2-(4-hydroxyphenyl)-6,7,8-trimethoxy-4H-chromen-4-one; 4,5-Dihydroxy-6,7,8-trimethoxyflavone; Xanthomicrol; Xanthomicrol



数据库引用编号

16 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

147 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 6 ANG, HIF1A, PIK3CA, PTGS2, TYR, VEGFA
Peripheral membrane protein 3 ANOS1, GORASP1, PTGS2
Endosome membrane 1 FLT3
Endoplasmic reticulum membrane 2 HMOX1, PTGS2
Nucleus 6 ANG, H2AX, HIF1A, HMOX1, THRA, VEGFA
cytosol 5 ANG, HIF1A, HMOX1, PIK3CA, THRA
dendrite 1 OPRM1
nuclear body 1 HIF1A
centrosome 1 H2AX
nucleoplasm 4 H2AX, HIF1A, HMOX1, THRA
RNA polymerase II transcription regulator complex 2 HIF1A, THRA
Cell membrane 3 ANOS1, OPRM1, TNF
Cytoplasmic side 2 GORASP1, HMOX1
lamellipodium 1 PIK3CA
Cell projection, axon 1 OPRM1
Multi-pass membrane protein 1 OPRM1
Golgi apparatus membrane 1 GORASP1
Synapse 1 OPRM1
cell surface 3 ANOS1, TNF, VEGFA
Golgi apparatus 4 ATRN, GORASP1, OPRM1, VEGFA
Golgi membrane 2 C1GALT1, GORASP1
growth cone 1 ANG
neuronal cell body 2 ANG, TNF
Lysosome 1 TYR
endosome 1 OPRM1
plasma membrane 6 ANOS1, ATRN, FLT3, OPRM1, PIK3CA, TNF
Membrane 5 C1GALT1, FLT3, HMOX1, OPRM1, VEGFA
axon 1 OPRM1
caveola 1 PTGS2
extracellular exosome 3 ATRN, H2AX, MMP9
endoplasmic reticulum 5 FLT3, HMOX1, OPRM1, PTGS2, VEGFA
extracellular space 7 ANG, ANOS1, ATRN, HMOX1, MMP9, TNF, VEGFA
perinuclear region of cytoplasm 3 HMOX1, PIK3CA, TYR
adherens junction 1 VEGFA
intercalated disc 1 PIK3CA
protein-containing complex 2 HIF1A, PTGS2
intracellular membrane-bounded organelle 1 TYR
Microsome membrane 1 PTGS2
Single-pass type I membrane protein 3 ATRN, FLT3, TYR
Secreted 3 ANG, ANOS1, VEGFA
extracellular region 5 ANG, ANOS1, MMP9, TNF, VEGFA
mitochondrial outer membrane 1 HMOX1
[Isoform 2]: Secreted 1 ATRN
motile cilium 1 HIF1A
external side of plasma membrane 1 TNF
Secreted, extracellular space, extracellular matrix 2 MMP9, VEGFA
actin cytoskeleton 1 ANG
perikaryon 1 OPRM1
nucleolus 1 ANG
axon cytoplasm 1 HIF1A
Melanosome membrane 1 TYR
Golgi-associated vesicle 1 TYR
recycling endosome 1 TNF
Single-pass type II membrane protein 2 C1GALT1, TNF
Membrane raft 1 TNF
cis-Golgi network 1 GORASP1
extracellular matrix 2 ANOS1, VEGFA
basement membrane 1 ANG
collagen-containing extracellular matrix 1 MMP9
secretory granule 1 VEGFA
nuclear speck 2 H2AX, HIF1A
Nucleus inner membrane 1 PTGS2
Nucleus outer membrane 1 PTGS2
nuclear inner membrane 1 PTGS2
nuclear outer membrane 1 PTGS2
receptor complex 1 FLT3
neuron projection 2 OPRM1, PTGS2
chromatin 2 HIF1A, THRA
phagocytic cup 1 TNF
Chromosome 2 ANG, H2AX
Nucleus, nucleolus 1 ANG
site of double-strand break 1 H2AX
[Isoform 3]: Secreted 1 ATRN
Cell projection, dendrite 1 OPRM1
Melanosome 1 TYR
Cytoplasm, Stress granule 1 ANG
cytoplasmic stress granule 1 ANG
Nucleus speckle 1 HIF1A
euchromatin 1 HIF1A
replication fork 1 H2AX
ficolin-1-rich granule lumen 1 MMP9
endoplasmic reticulum lumen 2 FLT3, PTGS2
male germ cell nucleus 1 H2AX
platelet alpha granule lumen 1 VEGFA
phosphatidylinositol 3-kinase complex 1 PIK3CA
phosphatidylinositol 3-kinase complex, class IA 1 PIK3CA
tertiary granule lumen 1 MMP9
XY body 1 H2AX
endocytic vesicle 1 ANG
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 GORASP1
Golgi apparatus, cis-Golgi network membrane 1 GORASP1
Single-pass type IV membrane protein 1 HMOX1
condensed nuclear chromosome 1 H2AX
[Isoform 1]: Cell membrane 1 ATRN
nucleosome 1 H2AX
site of DNA damage 1 H2AX
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
angiogenin-PRI complex 1 ANG
[Isoform Alpha-2]: Cytoplasm 1 THRA
[N-VEGF]: Cytoplasm 1 VEGFA
[VEGFA]: Secreted 1 VEGFA
[Isoform L-VEGF189]: Endoplasmic reticulum 1 VEGFA
[Isoform VEGF121]: Secreted 1 VEGFA
[Isoform VEGF165]: Secreted 1 VEGFA
VEGF-A complex 1 VEGFA
[Isoform 12]: Cytoplasm 1 OPRM1
phosphatidylinositol 3-kinase complex, class IB 1 PIK3CA
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Mariella Nieddu, Federica Pollastro, Paola Caria, Stefano Salamone, Antonella Rosa. Xanthomicrol Activity in Cancer HeLa Cells: Comparison with Other Natural Methoxylated Flavones. Molecules (Basel, Switzerland). 2023 Jan; 28(2):. doi: 10.3390/molecules28020558. [PMID: 36677614]
  • Ngoc Hong Nguyen, Qui Thanh Hoai Ta, Quang Thang Pham, Thi Ngoc Han Luong, Van Trung Phung, Thuc-Huy Duong, Van Giau Vo. Anticancer Activity of Novel Plant Extracts and Compounds from Adenosma bracteosum (Bonati) in Human Lung and Liver Cancer Cells. Molecules (Basel, Switzerland). 2020 Jun; 25(12):. doi: 10.3390/molecules25122912. [PMID: 32599892]
  • Ekaterina-Michaela Tomou, Maria V Chatziathanasiadou, Paschalina Chatzopoulou, Andreas G Tzakos, Helen Skaltsa. NMR-Based Chemical Profiling, Isolation and Evaluation of the Cytotoxic Potential of the Diterpenoid Siderol from Cultivated Sideritis euboea Heldr. Molecules (Basel, Switzerland). 2020 May; 25(10):. doi: 10.3390/molecules25102382. [PMID: 32443927]
  • Ilias Stefanis, Dimitra Hadjipavlou-Litina, Anna-Rita Bilia, Anastasia Karioti. LC-MS- and NMR-Guided Isolation of Monoterpene Dimers from Cultivated Thymus vulgaris Varico 3 Hybrid and Their Antityrosinase Activity. Planta medica. 2019 Aug; 85(11-12):941-946. doi: 10.1055/a-0927-7041. [PMID: 31163460]
  • Seyedeh-Somayeh Zamani, Mohsen Hossieni, Mahmoud Etebari, Pirooz Salehian, Soltan Ahmad Ebrahimi. Pharmacokinetics of calycopterin and xanthmicrol, two polymethoxylated hydroxyflavones with anti-angiogenic activities from Dracocephalum kotschyi Bioss. Daru : journal of Faculty of Pharmacy, Tehran University of Medical Sciences. 2016 Oct; 24(1):22. doi: 10.1186/s40199-016-0161-x. [PMID: 27716340]
  • Fatma Pinar Turkmenoglu, İpek Baysal, Samiye Ciftci-Yabanoglu, Kemal Yelekci, Hamdi Temel, Salih Paşa, Nurten Ezer, İhsan Çalış, Gulberk Ucar. Flavonoids from Sideritis Species: Human Monoamine Oxidase (hMAO) Inhibitory Activities, Molecular Docking Studies and Crystal Structure of Xanthomicrol. Molecules (Basel, Switzerland). 2015 Apr; 20(5):7454-73. doi: 10.3390/molecules20057454. [PMID: 25915461]
  • Hassan Abbaszadeh, Soltan Ahmad Ebrahimi, Maziar Mohammad Akhavan. Antiangiogenic activity of xanthomicrol and calycopterin, two polymethoxylated hydroxyflavones in both in vitro and ex vivo models. Phytotherapy research : PTR. 2014 Nov; 28(11):1661-70. doi: 10.1002/ptr.5179. [PMID: 24895220]
  • Mohammad Fattahi, Rosa M Cusido, Abbas Khojasteh, Mercedes Bonfill, Javier Palazon. Xanthomicrol: a comprehensive review of its chemistry, distribution, biosynthesis and pharmacological activity. Mini reviews in medicinal chemistry. 2014; 14(9):725-33. doi: 10.2174/1389557514666140820122818. [PMID: 25138085]
  • Palatheeya Sujatha, Gandhe Sreekanth, Shaikh Khasim, Belvotagi Venkatrao Adavi Rao, Bobbala Ravi Kumar, Achanta Venkata Narasimha Appa Rao. Flavonoids of Dikamali: A phytochemical reinvestigation. Natural product research. 2013 Oct; 27(20):1930-2. doi: 10.1080/14786419.2013.782494. [PMID: 23537094]
  • Ghazaal Moghaddam, Soltan Ahmad Ebrahimi, Nahid Rahbar-Roshandel, Alireza Foroumadi. Antiproliferative activity of flavonoids: influence of the sequential methoxylation state of the flavonoid structure. Phytotherapy research : PTR. 2012 Jul; 26(7):1023-8. doi: 10.1002/ptr.3678. [PMID: 22184071]
  • Ahmad Reza Gohari, Seyed Nasser Ostad, Fahimeh Moradi-Afrapoli, Maryam Malmir, Shohreh Tavajohi, Hassan Akbari, Soodabeh Saeidnia. Evaluation of the cytotoxicity of Satureja spicigera and its main compounds. TheScientificWorldJournal. 2012; 2012(?):203861. doi: 10.1100/2012/203861. [PMID: 22623883]
  • Ali M El-Hagrassi, Mamdouh M Ali, Abeer F Osman, Mohamed Shaaban. Phytochemical investigation and biological studies of Bombax malabaricum flowers. Natural product research. 2011 Jan; 25(2):141-51. doi: 10.1080/14786419.2010.518146. [PMID: 21246441]
  • Esra Küpeli, F Pinar Sahin, Erdem Yeşilada, Ihsan Caliş, Nurten Ezer. In vivo anti-inflammatory and antinociceptive activity evaluation of phenolic compounds from Sideritis stricta. Zeitschrift fur Naturforschung. C, Journal of biosciences. 2007 Jul; 62(7-8):519-25. doi: 10.1515/znc-2007-7-810. [PMID: 17913066]
  • Hector Ponce-Monter, Salud Perez, Miguel Angel Zavala, Cuauhtemoc Perez, Mariana Meckes, Arturo Macias, María Campos. Relaxant effect of xanthomicrol and 3alpha-angeloyloxy-2alpha-hydroxy-13,14z-dehydrocativic acid from Brickellia paniculata on rat uterus. Biological & pharmaceutical bulletin. 2006 Jul; 29(7):1501-3. doi: 10.1248/bpb.29.1501. [PMID: 16819199]
  • Fereshteh Jahaniani, Soltan Ahmed Ebrahimi, Nahid Rahbar-Roshandel, Massoud Mahmoudian. Xanthomicrol is the main cytotoxic component of Dracocephalum kotschyii and a potential anti-cancer agent. Phytochemistry. 2005 Jul; 66(13):1581-92. doi: 10.1016/j.phytochem.2005.04.035. [PMID: 15949825]
  • Soodabeh Saeidnia, Ahmad Reza Gohari, Michiho Ito, Fumiyuki Kiuchi, Gisho Honda. Bioactive constituents from Dracocephalum subcapitatum (O. Kuntze) Lipsky. Zeitschrift fur Naturforschung. C, Journal of biosciences. 2005 Jan; 60(1-2):22-4. doi: 10.1515/znc-2005-1-204. [PMID: 15787238]
  • Fatma U Afifi, Talal Aburjai. Antiplatelet activity of Varthemia iphionoides. Fitoterapia. 2004 Dec; 75(7-8):629-33. doi: 10.1016/j.fitote.2004.04.014. [PMID: 15567236]
  • Roberto F Vieira, Renée J Grayer, Alan J Paton. Chemical profiling of Ocimum americanum using external flavonoids. Phytochemistry. 2003 Jul; 63(5):555-67. doi: 10.1016/s0031-9422(03)00143-2. [PMID: 12809716]
  • Mariana Meckes, Fernando Calzada, Daniel Paz, Jaime Rodríguez, Héctor Ponce-Monter. Inhibitory effect of xanthomicrol and 3 alpha-angeloyloxy-2 alpha-hydroxy-13,14Z-dehydrocativic acid from Brickellia paniculata on the contractility of guinea-pig ileum. Planta medica. 2002 May; 68(5):467-9. doi: 10.1055/s-2002-32092. [PMID: 12058331]
  • R J Grayer, N C Veitch, G C Kite, A M Price, T Kokubun. Distribution of 8-oxygenated leaf-surface flavones in the genus Ocimum. Phytochemistry. 2001 Mar; 56(6):559-67. doi: 10.1016/s0031-9422(00)00439-8. [PMID: 11281133]