Pancratistatin (BioDeep_00000000607)

   

PANOMIX_OTCML-2023 natural product


代谢物信息卡片


(1,3)Dioxolo(4,5-j)phenanthridin-6(2H)-one, 1,3,4,4a,5,11b-hexahydro-1,2,3,4,7-pentahydroxy-, (1R-(1alpha,2beta,3alpha,4alpha,4aalpha,11bbeta))-

化学式: C14H15NO8 (325.0798)
中文名称:
谱图信息: 最多检出来源 Chinese Herbal Medicine(otcml) 76.59%

分子结构信息

SMILES: C1OC2=C(O1)C(=C3C(=C2)C4C(C(C(C(C4O)O)O)O)NC3=O)O
InChI: InChI=1S/C14H15NO8/c16-8-5-3-1-4-13(23-2-22-4)9(17)6(3)14(21)15-7(5)10(18)12(20)11(8)19/h1,5,7-8,10-12,16-20H,2H2,(H,15,21)/t5-,7-,8-,10+,11+,12+/m1/s1



数据库引用编号

18 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

48 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 9 ANXA5, BECN1, CASP3, CCNB1, CDC25C, RHOA, TP53, TUBB4B, VEGFA
Golgi apparatus, trans-Golgi network membrane 1 BECN1
Peripheral membrane protein 3 ACHE, ANXA5, BECN1
Endosome membrane 1 BECN1
Endoplasmic reticulum membrane 2 BECN1, RHOA
Mitochondrion membrane 2 ABCG2, BECN1
Cytoplasmic vesicle, autophagosome 1 BECN1
Nucleus 11 ACHE, BECN1, CASP3, CCNB1, CDC25C, ENDOG, PTX3, RHOA, TP53, TUBB4B, VEGFA
autophagosome 2 BECN1, MAP1LC3A
cytosol 9 ANXA5, BECN1, CASP3, CCNB1, CDC25C, MAP1LC3A, RHOA, TP53, TUBB4B
dendrite 1 BECN1
mitochondrial membrane 2 ABCG2, BECN1
nuclear body 1 BECN1
phagocytic vesicle 1 BECN1
phosphatidylinositol 3-kinase complex, class III 1 BECN1
trans-Golgi network 1 BECN1
centrosome 2 CCNB1, TP53
nucleoplasm 5 ABCG2, CASP3, CCNB1, CDC25C, TP53
Cell membrane 3 ABCG2, ACHE, RHOA
Lipid-anchor 2 MAP1LC3A, RHOA
Cytoplasmic side 1 RHOA
Cleavage furrow 1 RHOA
lamellipodium 1 RHOA
ruffle membrane 1 RHOA
Multi-pass membrane protein 1 ABCG2
Synapse 1 ACHE
cell cortex 1 RHOA
cell junction 1 RHOA
cell surface 2 ACHE, VEGFA
glutamatergic synapse 3 CASP3, MAP1LC3A, RHOA
Golgi apparatus 2 ACHE, VEGFA
mitochondrial inner membrane 1 ENDOG
neuromuscular junction 1 ACHE
neuronal cell body 1 CASP3
postsynapse 1 RHOA
sarcolemma 1 ANXA5
endosome 2 BECN1, RHOA
plasma membrane 4 ABCG2, ACHE, IFNLR1, RHOA
Membrane 7 ABCG2, ACHE, ANXA5, CCNB1, IFNLR1, TP53, VEGFA
apical plasma membrane 1 ABCG2
extracellular exosome 3 ANXA5, RHOA, TUBB4B
endoplasmic reticulum 3 BECN1, TP53, VEGFA
extracellular space 3 ACHE, PTX3, VEGFA
perinuclear region of cytoplasm 2 ACHE, CDC25C
adherens junction 1 VEGFA
mitochondrion 2 ENDOG, TP53
protein-containing complex 1 TP53
intracellular membrane-bounded organelle 1 MAP1LC3A
postsynaptic density 1 CASP3
Single-pass type I membrane protein 1 IFNLR1
Secreted 2 ACHE, VEGFA
extracellular region 5 ACHE, ANXA5, PTX3, TUBB4B, VEGFA
cytoplasmic side of plasma membrane 1 RHOA
Mitochondrion matrix 1 TP53
mitochondrial matrix 2 CCNB1, TP53
Extracellular side 1 ACHE
transcription regulator complex 1 TP53
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 TP53
external side of plasma membrane 1 ANXA5
Extracellular vesicle 1 TUBB4B
Secreted, extracellular space, extracellular matrix 1 VEGFA
dendritic spine 1 RHOA
microtubule cytoskeleton 1 TUBB4B
nucleolus 1 TP53
midbody 1 RHOA
vesicle 1 RHOA
Apical cell membrane 1 ABCG2
Cell projection, lamellipodium 1 RHOA
Membrane raft 1 ABCG2
Cytoplasm, cytoskeleton 3 MAP1LC3A, TP53, TUBB4B
focal adhesion 2 ANXA5, RHOA
microtubule 2 MAP1LC3A, TUBB4B
extracellular matrix 2 PTX3, VEGFA
basement membrane 1 ACHE
Nucleus, PML body 1 TP53
PML body 1 TP53
mitochondrial intermembrane space 1 CDC25C
collagen-containing extracellular matrix 1 ANXA5
secretory granule 1 VEGFA
Late endosome 1 MAP1LC3A
Zymogen granule membrane 1 ANXA5
chromatin 2 PTX3, TP53
Cytoplasmic vesicle, autophagosome membrane 1 MAP1LC3A
autophagosome membrane 1 MAP1LC3A
cell periphery 1 RHOA
mitotic spindle 1 TUBB4B
cytoskeleton 2 RHOA, TUBB4B
brush border membrane 1 ABCG2
spindle pole 1 CCNB1
Cytoplasm, cell cortex 1 RHOA
Lipid-anchor, GPI-anchor 1 ACHE
organelle membrane 1 MAP1LC3A
site of double-strand break 1 TP53
intercellular bridge 1 TUBB4B
Cytoplasm, cytoskeleton, flagellum axoneme 1 TUBB4B
sperm flagellum 1 TUBB4B
Endomembrane system 1 MAP1LC3A
axonemal microtubule 1 TUBB4B
phagophore assembly site 1 BECN1
phosphatidylinositol 3-kinase complex, class III, type I 1 BECN1
phosphatidylinositol 3-kinase complex, class III, type II 1 BECN1
Cell projection, dendrite 1 RHOA
side of membrane 1 ACHE
germ cell nucleus 1 TP53
replication fork 1 TP53
secretory granule membrane 1 RHOA
nuclear matrix 1 TP53
transcription repressor complex 1 TP53
platelet alpha granule lumen 1 VEGFA
specific granule lumen 1 PTX3
tertiary granule lumen 1 PTX3
azurophil granule lumen 1 TUBB4B
outer kinetochore 1 CCNB1
vesicle membrane 1 ANXA5
[Isoform 1]: Nucleus 1 TP53
synaptic cleft 1 ACHE
ficolin-1-rich granule membrane 1 RHOA
external side of apical plasma membrane 1 ABCG2
death-inducing signaling complex 1 CASP3
apical junction complex 1 RHOA
Autolysosome 1 MAP1LC3A
cyclin B1-CDK1 complex 1 CCNB1
endothelial microparticle 1 ANXA5
[N-VEGF]: Cytoplasm 1 VEGFA
[VEGFA]: Secreted 1 VEGFA
[Isoform L-VEGF189]: Endoplasmic reticulum 1 VEGFA
[Isoform VEGF121]: Secreted 1 VEGFA
[Isoform VEGF165]: Secreted 1 VEGFA
VEGF-A complex 1 VEGFA
[Isoform H]: Cell membrane 1 ACHE
cytoplasmic side of mitochondrial outer membrane 1 BECN1
interleukin-28 receptor complex 1 IFNLR1
[Beclin-1-C 35 kDa]: Mitochondrion 1 BECN1
[Beclin-1-C 37 kDa]: Mitochondrion 1 BECN1


文献列表

  • Deepali Katoch, Dharmesh Kumar, Yogendra S Padwad, Bikram Singh, Upendra Sharma. Narciclasine-4-O-β-D-xylopyranoside, a new narciclasine glycoside from Zephyranthes minuta. Natural product research. 2020 Jan; 34(2):233-240. doi: 10.1080/14786419.2018.1527836. [PMID: 30636443]
  • Jerald J Nair, Johannes van Staden. Pharmacological and toxicological insights to the South African Amaryllidaceae. Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association. 2013 Dec; 62(?):262-75. doi: 10.1016/j.fct.2013.08.042. [PMID: 23994658]
  • Jerald J Nair, Lucie Rárová, Miroslav Strnad, Jaume Bastida, Johannes van Staden. Apoptosis-inducing effects of distichamine and narciprimine, rare alkaloids of the plant family Amaryllidaceae. Bioorganic & medicinal chemistry letters. 2012 Oct; 22(19):6195-9. doi: 10.1016/j.bmcl.2012.08.005. [PMID: 22921081]
  • Dennis Ma, Phillip Tremblay, Kevinjeet Mahngar, Pardis Akbari-Asl, Jonathan Collins, Tomas Hudlicky, James McNulty, Siyaram Pandey. A novel synthetic C-1 analogue of 7-deoxypancratistatin induces apoptosis in p53 positive and negative human colorectal cancer cells by targeting the mitochondria: enhancement of activity by tamoxifen. Investigational new drugs. 2012 Jun; 30(3):1012-27. doi: 10.1007/s10637-011-9668-7. [PMID: 21494837]
  • Xiaofan Na, Yanfeng Hu, Kun Yue, Hongxia Lu, Pengfei Jia, Huahua Wang, Xiaomin Wang, Yurong Bi. Concentration-dependent effects of narciclasine on cell cycle progression in Arabidopsis root tips. BMC plant biology. 2011 Dec; 11(?):184. doi: 10.1186/1471-2229-11-184. [PMID: 22204558]
  • S J Chatterjee, P Ovadje, M Mousa, C Hamm, S Pandey. The efficacy of dandelion root extract in inducing apoptosis in drug-resistant human melanoma cells. Evidence-based complementary and alternative medicine : eCAM. 2011; 2011(?):129045. doi: 10.1155/2011/129045. [PMID: 21234313]
  • Carly Griffin, Natasha Sharda, Divya Sood, Jerald Nair, James McNulty, Siyaram Pandey. Selective cytotoxicity of pancratistatin-related natural Amaryllidaceae alkaloids: evaluation of the activity of two new compounds. Cancer cell international. 2007 Jun; 7(?):10. doi: 10.1186/1475-2867-7-10. [PMID: 17550595]
  • Natasha Kekre, Carly Griffin, James McNulty, Siyaram Pandey. Pancratistatin causes early activation of caspase-3 and the flipping of phosphatidyl serine followed by rapid apoptosis specifically in human lymphoma cells. Cancer chemotherapy and pharmacology. 2005 Jul; 56(1):29-38. doi: 10.1007/s00280-004-0941-8. [PMID: 15726366]
  • Motoh Mutsuga, Keisuke Kojima, Miwako Yamashita, Takamasa Ohno, Yukio Ogihara, Makoto Inoue. Inhibition of cell cycle progression through specific phase by pancratistatin derivatives. Biological & pharmaceutical bulletin. 2002 Feb; 25(2):223-8. doi: 10.1248/bpb.25.223. [PMID: 11853171]
  • P Khan, S Abbas, B Petit, R Caffrey, V Megram, A McGown. Development and validation of a high-performance liquid chromatographic assay using solid-phase extraction for the novel antitumor agent pancratistatin in human plasma. Journal of chromatography. B, Biomedical sciences and applications. 1999 Apr; 726(1-2):249-54. doi: 10.1016/s0378-4347(99)00053-5. [PMID: 10348192]
  • G R Pettit, G R Pettit, R A Backhaus, F E Boettner. Antineoplastic agents, 294. Variations in the formation of pancratistatin and related isocarbostyrils in Hymenocallis littoralis. Journal of natural products. 1995 Jan; 58(1):37-43. doi: 10.1021/np50115a004. [PMID: 7760076]