Phosphoribosyl pyrophosphate (BioDeep_00000415791)

Main id: BioDeep_00000001269

 


代谢物信息卡片


ALPHA-PHOSPHORIBOSYLPYROphosphORIC ACID

化学式: C5H13O14P3 (389.9518)
中文名称: 磷酸核糖焦磷酸
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C(C1C(C(C(O1)OP(=O)(O)OP(=O)(O)O)O)O)OP(=O)(O)O
InChI: InChI=1S/C5H13O14P3/c6-3-2(1-16-20(8,9)10)17-5(4(3)7)18-22(14,15)19-21(11,12)13/h2-7H,1H2,(H,14,15)(H2,8,9,10)(H2,11,12,13)/t2-,3-,4-,5-/m1/s1

描述信息

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Corona-virus
Coronavirus
SARS-CoV-2
COVID-19
SARS-CoV
COVID19
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同义名列表

2 个代谢物同义名

ALPHA-PHOSPHORIBOSYLPYROphosphORIC ACID; Phosphoribosyl pyrophosphate



数据库引用编号

14 个数据库交叉引用编号

分类词条

3 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 13 ADA, APRT, EMP2, G6PD, NAMPT, PKM, PNP, PRPS1, PRPS2, PRPSAP1, PURA, QPRT, XDH
Peripheral membrane protein 2 ADA, G6PD
Endoplasmic reticulum membrane 1 TKT
Nucleus 6 ADK, EMP2, NAMPT, OMP, PKM, PURA
cytosol 15 ADA, ADK, APRT, G6PD, GLS, NAMPT, OMP, PKM, PNP, PPAT, PRPS1, PRPS2, QPRT, TKT, XDH
dendrite 1 PURA
nuclear body 1 TKT
nucleoplasm 3 ADK, APRT, TKT
Cell membrane 3 ADA, EMP2, TKT
Multi-pass membrane protein 1 EMP2
Golgi apparatus membrane 1 EMP2
Synapse 2 GLS, OMP
cell junction 2 ADA, NAMPT
cell surface 2 ADA, EMP2
glutamatergic synapse 1 PURA
Golgi apparatus 1 EMP2
Golgi membrane 2 EMP2, INS
neuronal cell body 2 OMP, PURA
postsynapse 1 PURA
Cytoplasm, cytosol 2 G6PD, GLS
Lysosome 1 ADA
plasma membrane 5 ADA, ADK, EMP2, GCG, TKT
Membrane 4 ADA, EMP2, G6PD, PRPS1
apical plasma membrane 2 EMP2, TKT
axon 1 OMP
extracellular exosome 7 APRT, G6PD, NAMPT, PKM, PNP, QPRT, TKT
extracellular space 5 GCG, INS, NAMPT, PNP, XDH
perinuclear region of cytoplasm 1 EMP2
mitochondrion 2 GLS, PKM
intracellular membrane-bounded organelle 1 G6PD
Single-pass type I membrane protein 1 TKT
Secreted 4 GCG, INS, NAMPT, PNP
extracellular region 5 APRT, GCG, INS, PKM, PNP
cytoplasmic side of plasma membrane 1 G6PD
mitochondrial matrix 1 GLS
Extracellular side 1 ADA
Cytoplasmic vesicle lumen 1 ADA
anchoring junction 1 ADA
centriolar satellite 1 G6PD
external side of plasma membrane 1 ADA
Extracellular vesicle 1 PKM
actin cytoskeleton 1 TKT
cytoplasmic vesicle 1 EMP2
apical part of cell 1 EMP2
vesicle 2 PKM, TKT
Apical cell membrane 1 EMP2
Cytoplasm, perinuclear region 1 EMP2
Membrane raft 1 EMP2
focal adhesion 1 TKT
Peroxisome 2 TKT, XDH
sarcoplasmic reticulum 1 XDH
collagen-containing extracellular matrix 1 PKM
nuclear speck 1 NAMPT
receptor complex 1 TKT
cilium 1 PKM
[Isoform 1]: Mitochondrion 1 GLS
chromosome, telomeric region 1 PURA
endosome lumen 1 INS
ficolin-1-rich granule lumen 2 PKM, PNP
secretory granule lumen 5 APRT, GCG, INS, PKM, PNP
Golgi lumen 1 INS
endoplasmic reticulum lumen 2 GCG, INS
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
[Isoform 2]: Cytoplasm 1 ADK
[Isoform 1]: Nucleus 1 ADK
Rough endoplasmic reticulum 1 PKM
ribose phosphate diphosphokinase complex 3 PRPS1, PRPS2, PRPSAP1
[Isoform 3]: Mitochondrion 1 GLS
[Glutaminase kidney isoform, mitochondrial 68 kDa chain]: Mitochondrion matrix 1 GLS
[Glutaminase kidney isoform, mitochondrial 65 kDa chain]: Mitochondrion matrix 1 GLS
[Glucagon-like peptide 1]: Secreted 1 GCG
catalytic complex 1 QPRT
[Isoform M2]: Cytoplasm 1 PKM
[Isoform M1]: Cytoplasm 1 PKM


文献列表

  • Eziuche A Ugbogu, Lilian M Schweizer, Michael Schweizer. Contribution of Model Organisms to Investigating the Far-Reaching Consequences of PRPP Metabolism on Human Health and Well-Being. Cells. 2022 06; 11(12):. doi: 10.3390/cells11121909. [PMID: 35741038]
  • Qianqian Tian, Wanbo Li, Jiacheng Li, Yao Xiao, Baolan Wu, Zhiyong Wang, Fang Han. Towards Understanding PRPS1 as a Molecular Player in Immune Response in Yellow Drum (Nibea albiflora). International journal of molecular sciences. 2022 Jun; 23(12):. doi: 10.3390/ijms23126475. [PMID: 35742917]
  • Piero L Ipata, Marcella Camici, Vanna Micheli, Maria G Tozz. Metabolic network of nucleosides in the brain. Current topics in medicinal chemistry. 2011; 11(8):909-22. doi: 10.2174/156802611795347555. [PMID: 21401502]
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  • Hairong Huang, Stefan Berg, John S Spencer, Danny Vereecke, Wim D'Haeze, Marcelle Holsters, Michael R McNeil. Identification of amino acids and domains required for catalytic activity of DPPR synthase, a cell wall biosynthetic enzyme of Mycobacterium tuberculosis. Microbiology (Reading, England). 2008 Mar; 154(Pt 3):736-743. doi: 10.1099/mic.0.2007/013532-0. [PMID: 18310020]
  • Hairong Huang, Michael S Scherman, Wim D'Haeze, Danny Vereecke, Marcelle Holsters, Dean C Crick, Michael R McNeil. Identification and active expression of the Mycobacterium tuberculosis gene encoding 5-phospho-{alpha}-d-ribose-1-diphosphate: decaprenyl-phosphate 5-phosphoribosyltransferase, the first enzyme committed to decaprenylphosphoryl-d-arabinose synthesis. The Journal of biological chemistry. 2005 Jul; 280(26):24539-43. doi: 10.1074/jbc.m504068200. [PMID: 15878857]
  • Frederic D Sigoillot, David R Evans, Hedeel I Guy. Growth-dependent regulation of mammalian pyrimidine biosynthesis by the protein kinase A and MAPK signaling cascades. The Journal of biological chemistry. 2002 May; 277(18):15745-51. doi: 10.1074/jbc.m201112200. [PMID: 11872754]
  • Roger Schneiter, Andrew T Carter, Yolanda Hernando, Günther Zellnig, Lilian M Schweizer, Michael Schweizer. The importance of the five phosphoribosyl-pyrophosphate synthetase (Prs) gene products of Saccharomyces cerevisiae in the maintenance of cell integrity and the subcellular localization of Prs1p. Microbiology (Reading, England). 2000 Dec; 146 Pt 12(?):3269-3278. doi: 10.1099/00221287-146-12-3269. [PMID: 11101685]
  • E Zoref-Shani, S Feinstein, Y Frishberg, Y Bromberg, O Sperling. Kelley-Seegmiller syndrome due to a unique variant of hypoxanthine-guanine phosphoribosyltransferase: reduced affinity for 5-phosphoribosyl-1-pyrophosphate manifested only at low, physiological substrate concentrations. Biochimica et biophysica acta. 2000 Feb; 1500(2):197-203. doi: 10.1016/s0925-4439(99)00103-9. [PMID: 10657589]
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  • J M Buchanan, M L Smith, R J Smith. Regulation of nucleotide and pentose synthesis in resting and stimulated 3T6 fibroblasts. Advances in enzyme regulation. 1982; 20(?):135-52. doi: 10.1016/0065-2571(82)90013-9. [PMID: 6180605]
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