Pimaric acid (BioDeep_00000003594)

   

PANOMIX_OTCML-2023 natural product


代谢物信息卡片


Dextropimaric acid

化学式: C20H30O2 (302.2246)
中文名称: 棕榈酸(PiMA), 海松酸
谱图信息: 最多检出来源 Chinese Herbal Medicine(otcml) 81%

分子结构信息

SMILES: C1C[C@@]([C@H]2[C@](C1)([C@@H]1C(=C[C@@](CC1)(C=C)C)CC2)C)(C)C(=O)O
InChI: InChI=1S/C20H30O2/c1-5-18(2)12-9-15-14(13-18)7-8-16-19(15,3)10-6-11-20(16,4)17(21)22/h5,13,15-16H,1,6-12H2,2-4H3,(H,21,22)

描述信息

relative retention time with respect to 9-anthracene Carboxylic Acid is 1.561
relative retention time with respect to 9-anthracene Carboxylic Acid is 1.568
relative retention time with respect to 9-anthracene Carboxylic Acid is 1.560

同义名列表

5 个代谢物同义名

Pimaric acid; (+)-Pimaric acid; Dextropimaric acid; NSC 2956; (+)-Pimaric acid



数据库引用编号

19 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

207 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 7 ACE, AIMP2, ATF2, BCL2, CASP3, EDN1, PTGS2
Peripheral membrane protein 3 CYP1B1, GORASP1, PTGS2
Endoplasmic reticulum membrane 5 BCL2, CYP1B1, CYP26A1, HMGCR, PTGS2
Nucleus 5 AIMP2, ATF2, BCL2, CASP3, JUND
cytosol 4 AIMP2, BCL2, CASP3, KCNA1
dendrite 2 KCNA1, KCNB1
nuclear body 1 CSF1
nucleoplasm 3 ATF2, CASP3, JUND
RNA polymerase II transcription regulator complex 2 ATF2, JUND
Cell membrane 7 ACE, CSF1, KCNA1, KCNB1, KCND3, KCNMA1, TNF
Cytoplasmic side 1 GORASP1
Cell projection, axon 2 KCNA1, KCNB1
Multi-pass membrane protein 5 HMGCR, KCNA1, KCNB1, KCND3, KCNMA1
Golgi apparatus membrane 1 GORASP1
Synapse 2 KCNA1, KCNB1
cell junction 1 KCNA1
cell surface 3 KCNA1, KCNB1, TNF
glutamatergic synapse 2 CASP3, KCNA1
Golgi apparatus 1 GORASP1
Golgi membrane 1 GORASP1
lysosomal membrane 1 GAA
neuronal cell body 4 CASP3, KCNA1, KCND3, TNF
presynaptic membrane 1 KCNA1
sarcolemma 2 KCNB1, KCND3
Cytoplasm, cytosol 1 AIMP2
Lysosome 2 ACE, GAA
Presynapse 1 KCNA1
endosome 1 ACE
plasma membrane 8 ACE, CSF1, GAA, KCNA1, KCNB1, KCND3, KCNMA1, TNF
Membrane 11 ACE, AIMP2, BCL2, CSF1, CYP1B1, GAA, HMGCR, KCNA1, KCNB1, KCND3, KCNMA1
apical plasma membrane 3 KCNA1, KCNB1, KCNMA1
axon 1 KCNB1
caveola 2 KCNMA1, PTGS2
extracellular exosome 2 ACE, GAA
Lysosome membrane 1 GAA
endoplasmic reticulum 4 BCL2, HMGCR, KCNA1, PTGS2
extracellular space 5 ACE, CSF1, EDN1, PNLIP, TNF
lysosomal lumen 1 GAA
perinuclear region of cytoplasm 2 CSF1, KCNB1
mitochondrion 2 BCL2, CYP1B1
protein-containing complex 2 BCL2, PTGS2
intracellular membrane-bounded organelle 2 CYP1B1, GAA
Microsome membrane 3 CYP1B1, CYP26A1, PTGS2
postsynaptic density 1 CASP3
Single-pass type I membrane protein 2 ACE, CSF1
Secreted 4 ACE, EDN1, GAA, PNLIP
extracellular region 6 ACE, CSF1, EDN1, GAA, PNLIP, TNF
Mitochondrion outer membrane 1 BCL2
Single-pass membrane protein 1 BCL2
mitochondrial outer membrane 2 ATF2, BCL2
basal part of cell 1 EDN1
neuronal cell body membrane 1 KCNB1
anchoring junction 1 KCNA1
transcription regulator complex 1 JUND
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
external side of plasma membrane 2 ACE, TNF
dendritic spine 1 KCND3
perikaryon 2 KCNA1, KCNB1
cytoplasmic vesicle 1 KCNA1
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
postsynaptic membrane 4 KCNA1, KCNB1, KCND3, KCNMA1
Cell membrane, sarcolemma 2 KCNB1, KCND3
Membrane raft 1 TNF
pore complex 1 BCL2
GABA-ergic synapse 1 KCND3
cis-Golgi network 1 GORASP1
peroxisomal membrane 1 HMGCR
lateral plasma membrane 1 KCNB1
Nucleus inner membrane 1 PTGS2
Nucleus outer membrane 1 PTGS2
nuclear inner membrane 1 PTGS2
nuclear outer membrane 1 PTGS2
Postsynaptic cell membrane 1 KCNB1
neuron projection 1 PTGS2
chromatin 2 ATF2, JUND
phagocytic cup 1 TNF
brush border membrane 1 ACE
sperm midpiece 1 ACE
site of double-strand break 1 ATF2
axon initial segment 1 KCNA1
Cell projection, dendrite 3 KCNA1, KCNB1, KCND3
tertiary granule membrane 1 GAA
Presynaptic cell membrane 1 KCNA1
myelin sheath 1 BCL2
Peroxisome membrane 1 HMGCR
basal plasma membrane 1 ACE
voltage-gated potassium channel complex 4 KCNA1, KCNB1, KCND3, KCNMA1
endoplasmic reticulum lumen 2 CSF1, PTGS2
transcription repressor complex 1 JUND
axon terminus 1 KCNA1
transport vesicle 1 EDN1
azurophil granule membrane 1 GAA
paranode region of axon 1 KCNA1
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 GORASP1
Golgi apparatus, cis-Golgi network membrane 1 GORASP1
calyx of Held 1 KCNA1
Synapse, synaptosome 1 KCNB1
Lateral cell membrane 1 KCNB1
ficolin-1-rich granule membrane 1 GAA
death-inducing signaling complex 1 CASP3
postsynaptic specialization membrane 2 KCNB1, KCND3
aminoacyl-tRNA synthetase multienzyme complex 1 AIMP2
dendrite membrane 1 KCNB1
cholinergic synapse 1 KCNB1
transcription factor AP-1 complex 1 JUND
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
rough endoplasmic reticulum lumen 1 EDN1
Weibel-Palade body 1 EDN1
CSF1-CSF1R complex 1 CSF1
autolysosome lumen 1 GAA
BAD-BCL-2 complex 1 BCL2
proximal dendrite 1 KCNB1
[Angiotensin-converting enzyme, soluble form]: Secreted 1 ACE
[Isoform Testis-specific]: Cell membrane 1 ACE
H4 histone acetyltransferase complex 1 ATF2
juxtaparanode region of axon 1 KCNA1
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF
Kv4.3-KChIP1 channel complex 1 KCND3


文献列表

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  • Ken-ichi Kimura, Yuki Minamikawa, Yukiko Ogasawara, Jun Yoshida, Kei-ichi Saitoh, Hisao Shinden, Yue Qi Ye, Shunya Takahashi, Tokichi Miyakawa, Hiroyuki Koshino. Kujigamberol, a new dinorlabdane diterpenoid isolated from 85million years old Kuji amber using a biotechnological assay. Fitoterapia. 2012 Jul; 83(5):907-12. doi: 10.1016/j.fitote.2012.03.024. [PMID: 22507387]
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