Carbazole (BioDeep_00000003365)

 

Secondary id: BioDeep_00001867695

human metabolite blood metabolite


代谢物信息卡片


Dibenzo(b,D)pyrrole

化学式: C12H9N (167.0735)
中文名称: 咔唑
谱图信息: 最多检出来源 Homo sapiens(blood) 20.72%

分子结构信息

SMILES: C1=CC=C2C(=C1)C3=CC=CC=C3N2
InChI: InChI=1S/C12H9N/c1-3-7-11-9(5-1)10-6-2-4-8-12(10)13-11/h1-8,13H

描述信息

CONFIDENCE standard compound; INTERNAL_ID 1
D009676 - Noxae > D002273 - Carcinogens
KEIO_ID C040

同义名列表

10 个代谢物同义名

Dibenzo(b,D)pyrrole; Dibenzo[b,D]pyrrole; Diphenylenimide; Diphenylenimine; Dibenzopyrrole; 9-Azafluorene; 9H-Carbazole; CARBAZOLE; Carbazole; Carbazole



数据库引用编号

33 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

1 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(1)

  • carbazole degradation: 2'-aminobiphenyl-2,3-diol + O2 ⟶ (2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate + H+

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

5 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 12 ABCB1, ANXA5, AXIN2, BCL2, CASP3, CNR1, CNR2, MAPK14, MYC, PPY, TUBB4B, TYR
Peripheral membrane protein 4 ACHE, ANXA5, CYP1B1, FDXR
Endoplasmic reticulum membrane 2 BCL2, CYP1B1
Nucleus 8 ACHE, ARID3B, AXIN2, BCL2, CASP3, MAPK14, MYC, TUBB4B
cytosol 6 ANXA5, AXIN2, BCL2, CASP3, MAPK14, TUBB4B
dendrite 1 CNR2
centrosome 1 AXIN2
nucleoplasm 4 ARID3B, CASP3, MAPK14, MYC
Cell membrane 4 ABCB1, ACHE, CNR1, GRIK4
Cell projection, axon 1 CNR1
Multi-pass membrane protein 4 ABCB1, CNR1, GRIK4, SLC9C1
Synapse 1 ACHE
cell surface 2 ABCB1, ACHE
glutamatergic synapse 3 CASP3, CNR1, MAPK14
Golgi apparatus 1 ACHE
growth cone 1 CNR1
mitochondrial inner membrane 1 FDXR
neuromuscular junction 1 ACHE
neuronal cell body 1 CASP3
presynaptic membrane 2 CNR1, GRIK4
sarcolemma 1 ANXA5
Lysosome 1 TYR
Presynapse 1 CNR1
plasma membrane 8 ABCB1, ACHE, AXIN2, BCHE, CNR1, CNR2, GRIK4, SLC9C1
Membrane 8 ABCB1, ACHE, ANXA5, BCL2, CYP1B1, GRIK4, MYC, SLC9C1
apical plasma membrane 1 ABCB1
axon 1 CNR1
extracellular exosome 3 ABCB1, ANXA5, TUBB4B
endoplasmic reticulum 2 BCL2, CNR2
extracellular space 3 ACHE, BCHE, PPY
perinuclear region of cytoplasm 2 ACHE, TYR
mitochondrion 4 BCL2, CYP1B1, FDXR, MAPK14
protein-containing complex 2 BCL2, MYC
intracellular membrane-bounded organelle 2 CYP1B1, TYR
Microsome membrane 1 CYP1B1
postsynaptic density 1 CASP3
Single-pass type I membrane protein 1 TYR
Secreted 3 ACHE, BCHE, PPY
extracellular region 6 ACHE, ANXA5, BCHE, MAPK14, PPY, TUBB4B
Mitochondrion outer membrane 2 BCL2, CNR1
Single-pass membrane protein 1 BCL2
mitochondrial outer membrane 2 BCL2, CNR1
hippocampal mossy fiber to CA3 synapse 1 GRIK4
mitochondrial matrix 1 FDXR
Extracellular side 1 ACHE
motile cilium 1 SLC9C1
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
external side of plasma membrane 1 ANXA5
Extracellular vesicle 1 TUBB4B
actin cytoskeleton 1 CNR1
perikaryon 1 CNR2
beta-catenin destruction complex 1 AXIN2
microtubule cytoskeleton 1 TUBB4B
nucleolus 1 MYC
Melanosome membrane 1 TYR
Golgi-associated vesicle 1 TYR
postsynaptic membrane 2 CNR2, GRIK4
Apical cell membrane 1 ABCB1
Mitochondrion inner membrane 1 FDXR
Membrane raft 1 CNR1
pore complex 1 BCL2
Cytoplasm, cytoskeleton 1 TUBB4B
focal adhesion 1 ANXA5
microtubule 1 TUBB4B
GABA-ergic synapse 1 CNR1
basement membrane 1 ACHE
collagen-containing extracellular matrix 1 ANXA5
nuclear speck 1 MAPK14
Postsynaptic cell membrane 1 GRIK4
kainate selective glutamate receptor complex 1 GRIK4
Zymogen granule membrane 1 ANXA5
chromatin 1 MYC
cell projection 1 GRIK4
mitotic spindle 1 TUBB4B
cytoskeleton 1 TUBB4B
Nucleus, nucleolus 1 MYC
spindle pole 1 MAPK14
blood microparticle 1 BCHE
Lipid-anchor, GPI-anchor 1 ACHE
intercellular bridge 1 TUBB4B
Cytoplasm, cytoskeleton, flagellum axoneme 1 TUBB4B
sperm flagellum 1 TUBB4B
nuclear envelope 1 MYC
axonemal microtubule 1 TUBB4B
Cell projection, cilium, flagellum membrane 1 SLC9C1
Nucleus, nucleoplasm 1 MYC
Cell projection, dendrite 1 CNR2
Melanosome 1 TYR
Presynaptic cell membrane 1 GRIK4
side of membrane 1 ACHE
myelin sheath 1 BCL2
ficolin-1-rich granule lumen 1 MAPK14
secretory granule lumen 1 MAPK14
endoplasmic reticulum lumen 1 BCHE
RNA polymerase II transcription repressor complex 1 MYC
azurophil granule lumen 1 TUBB4B
postsynaptic density membrane 1 GRIK4
nuclear envelope lumen 1 BCHE
vesicle membrane 1 ANXA5
extrinsic component of cytoplasmic side of plasma membrane 1 CNR2
synaptic cleft 1 ACHE
external side of apical plasma membrane 1 ABCB1
death-inducing signaling complex 1 CASP3
Rough endoplasmic reticulum 1 MYC
Myc-Max complex 1 MYC
endothelial microparticle 1 ANXA5
BAD-BCL-2 complex 1 BCL2
[Isoform H]: Cell membrane 1 ACHE
nucleoplasmic reticulum 1 MYC


文献列表

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  • Speranta Avram, Ana Maria Udrea, Diana Camelia Nuta, Carmen Limban, Adrian Cosmin Balea, Miron Teodor Caproiu, Florea Dumitrascu, Cătălin Buiu, Alexandra Teodora Bordei. Synthesis and Bioinformatic Characterization of New Schiff Bases with Possible Applicability in Brain Disorders. Molecules (Basel, Switzerland). 2021 Jul; 26(14):. doi: 10.3390/molecules26144160. [PMID: 34299440]
  • Yan-Ping Liu, Yu-Jie Li, Ying-Ying Zhao, Jia-Ming Guo, Yun-Yao Liu, Xiao-Ping Wang, Zhang-Yang Shen, Lei Qiang, Yan-Hui Fu. Carbazole alkaloids from the fruits of Clausena anisum-olens with potential PTP1B and α-glucosidase inhibitory activities. Bioorganic chemistry. 2021 05; 110(?):104775. doi: 10.1016/j.bioorg.2021.104775. [PMID: 33725509]
  • Faisal Rashid, Sumera Zaib, Aliya Ibrar, Syeda A Ejaz, Aamer Saeed, Jamshed Iqbal, Imtiaz Khan. New Hybrid Scaffolds Based on Carbazole-Chalcones as Potent Anticancer Agents. Anti-cancer agents in medicinal chemistry. 2021; 21(9):1082-1091. doi: 10.2174/1871520620666200721110732. [PMID: 32698741]
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  • Seema Meena, Sarma Rajeev Kumar, Varun Dwivedi, Anup Kumar Singh, Chandan S Chanotiya, Md Qussen Akhtar, Krishna Kumar, Ajit Kumar Shasany, Dinesh A Nagegowda. Transcriptomic insight into terpenoid and carbazole alkaloid biosynthesis, and functional characterization of two terpene synthases in curry tree (Murraya koenigii). Scientific reports. 2017 03; 7(?):44126. doi: 10.1038/srep44126. [PMID: 28272514]
  • Zhenyuan Teng, Hongying Lv, Yaoyao Zhang, Yi Zhang, Jun Guan, Wang Chengyin. Development of a Fluorescent Labeling Reagent for Determination of Proline and Hydroxyproline in Myeloma Patient Plasma by HPLC-FLD. Journal of chromatographic science. 2016 Nov; 54(10):1743-1751. doi: 10.1093/chromsci/bmw132. [PMID: 27601044]
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  • Gabin Fabre, Anne Hänchen, Claude-Alain Calliste, Karel Berka, Srinivas Banala, Michal Otyepka, Roderich D Süssmuth, Patrick Trouillas. Lipocarbazole, an efficient lipid peroxidation inhibitor anchored in the membrane. Bioorganic & medicinal chemistry. 2015 Aug; 23(15):4866-4870. doi: 10.1016/j.bmc.2015.05.031. [PMID: 26068016]
  • Hong-Min Xia, Guo-Qing Ou Yang, Chuang-Jun Li, Jing-Zhi Yang, Jie Ma, Dan Zhang, Yan Li, Li Li, Dong-Ming Zhang. Clauemarazoles A-G, seven carbazole alkaloids from the stems of Clausena emarginata. Fitoterapia. 2015 Jun; 103(?):83-9. doi: 10.1016/j.fitote.2015.03.016. [PMID: 25797535]
  • Yi-Qian Du, Hang Liu, Chuang-Jun Li, Jie Ma, Dan Zhang, Li Li, Hua Sun, Xiu-Qi Bao, Dong-Ming Zhang. Bioactive carbazole alkaloids from the stems of Clausena lansium. Fitoterapia. 2015 Jun; 103(?):122-8. doi: 10.1016/j.fitote.2015.03.018. [PMID: 25804252]
  • Hang Liu, Ji-zhong Shen, Hai-xia Zhang. [Chemical constituents from stems of Clausena excavata]. Zhong yao cai = Zhongyaocai = Journal of Chinese medicinal materials. 2014 Nov; 37(11):2012-5. doi: . [PMID: 26027123]
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  • Wisanu Maneerat, Wong Phakhodee, Sarot Cheenpracha, Thunwadee Ritthiwigrom, Suwana Deachathai, Surat Laphookhieo. Clausenawallines G-K, carbazole alkaloids from Clausena wallichii twigs. Phytochemistry. 2013 Apr; 88(?):74-8. doi: 10.1016/j.phytochem.2012.12.014. [PMID: 23360667]
  • Seikou Nakamura, Souichi Nakashima, Yoshimi Oda, Nami Yokota, Katsuyoshi Fujimoto, Takahiro Matsumoto, Tomoe Ohta, Keiko Ogawa, Sayuri Maeda, Shino Nishida, Hisashi Matsuda, Masayuki Yoshikawa. Alkaloids from Sri Lankan curry-leaf (Murraya koenigii) display melanogenesis inhibitory activity: structures of karapinchamines A and B. Bioorganic & medicinal chemistry. 2013 Mar; 21(5):1043-9. doi: 10.1016/j.bmc.2013.01.012. [PMID: 23376010]
  • Xuening Fei, Yingchun Gu, Chao Li, Yuru Liu, Lu Yu. Synthesis and spectra of a kind of novel longer-wavelength benzoxazole indole styryl cyanine dye with a carbazole-bridged chain. Journal of fluorescence. 2013 Jan; 23(1):221-6. doi: 10.1007/s10895-012-1137-y. [PMID: 23054303]
  • Thilahgavani Nagappan, Thirukanthan Chandra Segaran, Mohd Effendy Abdul Wahid, Perumal Ramasamy, Charles S Vairappan. Efficacy of carbazole alkaloids, essential oil and extract of Murraya koenigii in enhancing subcutaneous wound healing in rats. Molecules (Basel, Switzerland). 2012 Dec; 17(12):14449-63. doi: 10.3390/molecules171214449. [PMID: 23519245]
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  • De-Yang Shen, Chih-Hua Chao, Hsiu-Hui Chan, Guan-Jhong Huang, Tsong-Long Hwang, Chin-Yu Lai, Kuo-Hsiung Lee, Tran Dinh Thang, Tian-Shung Wu. Bioactive constituents of Clausena lansium and a method for discrimination of aldose enantiomers. Phytochemistry. 2012 Oct; 82(?):110-7. doi: 10.1016/j.phytochem.2012.06.019. [PMID: 22818357]
  • Wisanu Maneerat, Wong Phakhodee, Thunwadee Ritthiwigrom, Sarot Cheenpracha, Trinop Promgool, Kulsiri Yossathera, Suwanna Deachathai, Surat Laphookhieo. Antibacterial carbazole alkaloids from Clausena harmandiana twigs. Fitoterapia. 2012 Sep; 83(6):1110-4. doi: 10.1016/j.fitote.2012.04.026. [PMID: 22579839]
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