Lumazine (BioDeep_00000003138)

 

Secondary id: BioDeep_00000405889

human metabolite PANOMIX_OTCML-2023 blood metabolite BioNovoGene_Lab2019 natural product


代谢物信息卡片


2,3,4,8-tetrahydropteridine-2,4-dione

化学式: C6H4N4O2 (164.0334)
中文名称: 无水茶碱, 2,4-二羟基蝶啶
谱图信息: 最多检出来源 Homo sapiens(blood) 25.98%

分子结构信息

SMILES: C1=CN=C2C(=N1)C(=O)NC(=O)N2
InChI: InChI=1S/C6H4N4O2/c11-5-3-4(8-2-1-7-3)9-6(12)10-5/h1-2H,(H2,8,9,10,11,12)

描述信息

Lumazine, also known as pteridine-2,4-dione or 2,4(3h,8h)-pteridinedione, belongs to pteridines and derivatives class of compounds. Those are polycyclic aromatic compounds containing a pteridine moiety, which consists of a pyrimidine fused to a pyrazine ring to form pyrimido(4,5-b)pyrazine. Lumazine is slightly soluble (in water) and a very weakly acidic compound (based on its pKa). Lumazine can be found in soy bean, which makes lumazine a potential biomarker for the consumption of this food product.
KEIO_ID L024
Pteridine-2,4(1H,3H)-dione is an endogenous metabolite.

同义名列表

13 个代谢物同义名

2,3,4,8-tetrahydropteridine-2,4-dione; 1H,3H-Pteridine-2,4-dione; 2,4(3H,8H)-Pteridinedione; 2,4-Dihydroxypteridine; 1H-pteridine-2,4-dione; Pteridine-2,4-dione; 2,4-Pteridinedione; 2,4-Pteridinediol; Lumazine; 2,4-Dihydroxypteridine; Pteridine-2,4(1H,3H)-dione; 2,4-Dihydroxypteridine; Lumazine



数据库引用编号

27 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

9 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 10 ALB, CASP3, CAT, CDK2, DHFR, GTPBP4, JAK2, TBP, TXN, XDH
Peripheral membrane protein 2 HSD17B6, JAK2
Endosome membrane 1 CLCN5
Nucleus 8 ALB, CASP3, CDK2, GTPBP4, JAK2, TBP, TXN, ZNF79
cytosol 11 ALB, CASP3, CAT, CDK2, CLCN5, DHFR, GTPBP4, JAK2, TXN, UAP1, XDH
dendrite 1 MAOB
centrosome 3 ALB, CDK2, SLC16A1
nucleoplasm 8 CASP3, CD2, CDK2, GTPBP4, JAK2, TBP, TXN, UAP1
Cell membrane 3 CD2, CLCN5, SLC16A1
Cytoplasmic side 1 MAOB
Early endosome membrane 1 HSD17B6
Multi-pass membrane protein 2 CLCN5, SLC16A1
Golgi apparatus membrane 1 CLCN5
Synapse 1 SLC16A1
cell junction 1 SLC16A1
cell surface 1 CD2
glutamatergic synapse 2 CASP3, JAK2
Golgi apparatus 3 ALB, CD2, CLCN5
Golgi membrane 2 CLCN5, INS
lysosomal membrane 2 CLCN5, GAA
neuronal cell body 2 CASP3, MAOB
postsynapse 1 JAK2
synaptic vesicle 1 CLCN5
Cytoplasm, cytosol 1 UAP1
Lysosome 1 GAA
endosome 1 CDK2
plasma membrane 7 CD2, CLCN5, F2, GAA, JAK2, SLC16A1, UAP1
Membrane 6 CAT, CLCN5, GAA, GTPBP4, JAK2, SLC16A1
apical plasma membrane 1 SLC16A1
basolateral plasma membrane 1 SLC16A1
caveola 1 JAK2
extracellular exosome 6 ALB, CAT, F2, GAA, SLC16A1, TXN
Lysosome membrane 1 GAA
Lumenal side 1 HSD17B6
endoplasmic reticulum 2 ALB, HSD17B6
extracellular space 4 ALB, F2, INS, XDH
lysosomal lumen 1 GAA
perinuclear region of cytoplasm 1 GTPBP4
mitochondrion 3 CAT, DHFR, MAOB
protein-containing complex 4 ALB, CAT, CD2, TBP
intracellular membrane-bounded organelle 4 CAT, GAA, HSD17B6, SLC16A1
Microsome membrane 1 HSD17B6
postsynaptic density 1 CASP3
Single-pass type I membrane protein 1 CD2
Secreted 5 ALB, F2, GAA, INS, TXN
extracellular region 7 ALB, CAT, CD2, F2, GAA, INS, TXN
cytoplasmic side of plasma membrane 2 CD2, JAK2
Mitochondrion outer membrane 1 MAOB
mitochondrial outer membrane 1 MAOB
mitochondrial matrix 1 CAT
anchoring junction 1 ALB
transcription regulator complex 1 CDK2
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 CDK2
nuclear membrane 1 GTPBP4
external side of plasma membrane 1 CD2
nucleolus 1 GTPBP4
Early endosome 1 CLCN5
apical part of cell 1 CLCN5
cell-cell junction 1 CD2
Apical cell membrane 1 SLC16A1
Membrane raft 1 JAK2
focal adhesion 2 CAT, JAK2
Peroxisome 2 CAT, XDH
sarcoplasmic reticulum 1 XDH
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
collagen-containing extracellular matrix 1 F2
lateral plasma membrane 1 SLC16A1
ciliary basal body 1 ALB
chromatin 1 TBP
cytoskeleton 1 JAK2
centriole 1 ALB
Nucleus, nucleolus 1 GTPBP4
spindle pole 1 ALB
chromosome, telomeric region 1 CDK2
blood microparticle 2 ALB, F2
Basolateral cell membrane 1 SLC16A1
nuclear envelope 1 CDK2
Endomembrane system 1 JAK2
endosome lumen 2 INS, JAK2
female germ cell nucleus 1 TBP
tertiary granule membrane 1 GAA
euchromatin 2 JAK2, TBP
basal plasma membrane 1 SLC16A1
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 2 CAT, INS
Golgi lumen 2 F2, INS
endoplasmic reticulum lumen 3 ALB, F2, INS
male germ cell nucleus 2 CDK2, TBP
transcription factor TFIID complex 1 TBP
platelet alpha granule lumen 1 ALB
transport vesicle 1 INS
azurophil granule membrane 1 GAA
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
mitochondrial envelope 1 MAOB
Single-pass type IV membrane protein 1 MAOB
Cajal body 1 CDK2
extrinsic component of cytoplasmic side of plasma membrane 1 JAK2
ficolin-1-rich granule membrane 1 GAA
death-inducing signaling complex 1 CASP3
female pronucleus 1 TBP
male pronucleus 1 TBP
condensed chromosome 1 CDK2
extrinsic component of plasma membrane 1 JAK2
granulocyte macrophage colony-stimulating factor receptor complex 1 JAK2
interleukin-12 receptor complex 1 JAK2
interleukin-23 receptor complex 1 JAK2
Nucleus, Cajal body 1 CDK2
X chromosome 1 CDK2
Y chromosome 1 CDK2
cyclin-dependent protein kinase holoenzyme complex 1 CDK2
cyclin E1-CDK2 complex 1 CDK2
cyclin E2-CDK2 complex 1 CDK2
catalase complex 1 CAT
autolysosome lumen 1 GAA
RNA polymerase transcription factor SL1 complex 1 TBP
transcription factor TFIIA complex 1 TBP
cyclin A2-CDK2 complex 1 CDK2
cyclin A1-CDK2 complex 1 CDK2
ciliary transition fiber 1 ALB


文献列表

  • Karthik Dhananjayan, Felix Irrgang, Ritesh Raju, David G Harman, Chris Moran, Velandai Srikanth, Gerald Münch. Determination of glyoxal and methylglyoxal in serum by UHPLC coupled with fluorescence detection. Analytical biochemistry. 2019 05; 573(?):51-66. doi: 10.1016/j.ab.2019.02.014. [PMID: 30796906]
  • Boonyanoot Chaiyosang, Kwanjai Kanokmedhakul, Jaursup Boonmak, Sujittra Youngme, Veerapol Kukongviriyapan, Kasem Soytong, Somdej Kanokmedhakul. A new lumazine peptide penilumamide E from the fungus Aspergillus terreus. Natural product research. 2016; 30(9):1017-24. doi: 10.1080/14786419.2015.1101107. [PMID: 26518160]
  • N Shaemningwar Moyon, Mullah Muhaiminul Islam, Smritakshi Phukan, Sivaprasad Mitra. Fluorescence modulation and associative behavior of lumazine in hydrophobic domain of micelles and bovine serum albumin. Journal of photochemistry and photobiology. B, Biology. 2013 Apr; 121(?):37-45. doi: 10.1016/j.jphotobiol.2013.02.008. [PMID: 23501728]
  • Cosima D Calvano, Saverio Carulli, Francesco Palmisano. 1H-pteridine-2,4-dione (lumazine): a new MALDI matrix for complex (phospho)lipid mixtures analysis. Analytical and bioanalytical chemistry. 2010 Sep; 398(1):499-507. doi: 10.1007/s00216-010-3927-x. [PMID: 20593166]
  • Anunciación Espinosa-Mansilla, Isabel Durán-Merás, Florentina Cañada Cañada, Maria Prado Márquez. High-performance liquid chromatographic determination of glyoxal and methylglyoxal in urine by prederivatization to lumazinic rings using in serial fast scan fluorimetric and diode array detectors. Analytical biochemistry. 2007 Dec; 371(1):82-91. doi: 10.1016/j.ab.2007.07.028. [PMID: 17884007]
  • J W Lin, Y F Chao, S F Weng. Riboflavin synthesis genes ribE, ribB, ribH, ribA reside in the lux operon of Photobacterium leiognathi. Biochemical and biophysical research communications. 2001 Jun; 284(3):587-95. doi: 10.1006/bbrc.2001.5013. [PMID: 11396941]
  • E Sato, S Koyama, S L Camhi, D K Nelson, R A Robbins. Reactive oxygen and nitrogen metabolites modulate fibronectin-induced fibroblast migration in vitro. Free radical biology & medicine. 2001 Jan; 30(1):22-9. doi: 10.1016/s0891-5849(00)00436-6. [PMID: 11134892]
  • E Sato, K L Simpson, M B Grisham, S Koyama, R A Robbins. Effects of reactive oxygen and nitrogen metabolites on RANTES- and IL-5-induced eosinophil chemotactic activity in vitro. The American journal of pathology. 1999 Aug; 155(2):591-8. doi: 10.1016/s0002-9440(10)65154-1. [PMID: 10433951]
  • T Sasaoka, N Kaneda, T Nagatsu. Highly sensitive assay for xanthine oxidase activity by high-performance liquid chromatography with fluorescence detection. Journal of chromatography. 1988 Feb; 424(2):392-7. doi: 10.1016/s0378-4347(00)81118-4. [PMID: 3372632]