20-Hydroxy-leukotriene B4 (BioDeep_00000018517)

 

Secondary id: BioDeep_00000003313, BioDeep_00000397621

human metabolite Endogenous blood metabolite


代谢物信息卡片


5,12,20-Trihydroxy-6,8,10,14-eicosatetraenoic acid, (S-(r*,s*-(e,Z,e,Z)))-isomer

化学式: C20H32O5 (352.225)
中文名称: 20-羟基白三烯B4
谱图信息: 最多检出来源 Viridiplantae(plant) 12.32%

分子结构信息

SMILES: C(CCC=CCC(C=CC=CC=CC(CCCC(=O)O)O)O)CCO
InChI: InChI=1S/C20H32O5/c21-17-10-6-2-1-3-7-12-18(22)13-8-4-5-9-14-19(23)15-11-16-20(24)25/h3-5,7-9,13-14,18-19,21-23H,1-2,6,10-12,15-17H2,(H,24,25)/b5-4+,7-3-,13-8+,14-9-/t18-,19-/m1/s1

描述信息

20-hydroxy- Leukotriene B4 (20-OH-LTB4) is an omega-hydroxylated metabolite of leukotriene B4 in human neutrophils. Elevated urinary concentrations of 20-OH-LTB4 and LTB4 are found in patients with Sjogren-Larsson syndrome (SLS, OMIM 270220), an autosomal recessively inherited neurocutaneous disorder caused by a deficiency of the microsomal enzyme fatty aldehyde dehydrogenase (FALDH), which as an essential role in LTB4 metabolism. Preterm birth seems to be one of the features of the syndrome. The reason for the preterm birth is unclear. It is hypothesized that it relates to the defective LTB4 degradation in SLS. The pathological urinary excretion of LTB4 and 20-OH-LTB4 is a biochemical marker for SLS. Surprisingly, 20-OH-LTB4 concentrations are normal in CSF. Leukotriene B4 is the major metabolite in neutrophil polymorphonuclear leukocytes. Leukotrienes are metabolites of arachidonic acid derived from the action of 5-LO (5-lipoxygenase). The immediate product of 5-LO is LTA4 (leukotriene A4), which is enzymatically converted into either LTB4 (leukotriene B4) by LTA4 hydrolase or LTC4 (leukotriene C4) by LTC4 synthase. The regulation of leukotriene production occurs at various levels, including expression of 5-LO, translocation of 5-LO to the perinuclear region and phosphorylation to either enhance or inhibit the activity of 5-LO. Biologically active LTB4 is metabolized by w-oxidation carried out by specific cytochrome P450s (CYP4F) followed by beta-oxidation from the w-carboxy position and after CoA ester formation. Other specific pathways of leukotriene metabolism include the 12-hydroxydehydrogenase/ 15-oxo-prostaglandin-13-reductase that form a series of conjugated diene metabolites that have been observed to be excreted into human urine. Metabolism of LTC4 occurs by sequential peptide cleavage reactions involving a gamma-glutamyl transpeptidase that forms LTD4 (leukotriene D4) and a membrane-bound dipeptidase that converts LTD4 into LTE4 (leukotriene E4) before w-oxidation. These metabolic transformations of the primary leukotrienes are critical for termination of their biological activity, and defects in expression of participating enzymes may be involved in specific genetic disease. (PMID: 12709426, 9799565, 11408337, 17623009). Leukotrienes are eicosanoids. The eicosanoids consist of the prostaglandins (PGs), thromboxanes (TXs), leukotrienes (LTs), and lipoxins (LXs). The PGs and TXs are collectively identified as prostanoids. Prostaglandins were originally shown to be synthesized in the prostate gland, thromboxanes from platelets (thrombocytes), and leukotrienes from leukocytes, hence the derivation of their names. All mammalian cells except erythrocytes synthesize eicosanoids. These molecules are extremely potent, able to cause profound physiological effects at very dilute concentrations. All eicosanoids function locally at the site of synthesis, through receptor-mediated G-protein linked signalling pathways.
20-hydroxy- Leukotriene B4 (20-OH-LTB4) is an omega-hydroxylated metabolite of leukotriene B4 in human neutrophils. Elevated urinary concentrations of 20-OH-LTB4 and LTB4 are found in patients with Sjogren-Larsson syndrome (SLS, OMIM 270220), an autosomal recessively inherited neurocutaneous disorder caused by a deficiency of the microsomal enzyme fatty aldehyde dehydrogenase (FALDH), which as an essential role in LTB4 metabolism. Preterm birth seems to be one of the features of the syndrome. The reason for the preterm birth is unclear. It is hypothesized that it relates to the defective LTB4 degradation in SLS. The pathological urinary excretion of LTB4 and 20-OH-LTB4 is a biochemical marker for SLS. Surprisingly, 20-OH-LTB4 concentrations are normal in CSF. Leukotriene B4 is the major metabolite in neutrophil polymorphonuclear leukocytes. Leukotrienes are metabolites of arachidonic acid derived from the action of 5-LO (5-lipoxygenase). The immediate product of 5-LO is LTA4 (leukotriene A4), which is enzymatically converted into either LTB4 (leukotriene B4) by LTA4 hydrolase or LTC4 (leukotriene C4) by LTC4 synthase. The regulation of leukotriene production occurs at various levels, including expression of 5-LO, translocation of 5-LO to the perinuclear region and phosphorylation to either enhance or inhibit the activity of 5-LO. Biologically active LTB4 is metabolized by w-oxidation carried out by specific cytochrome P450s (CYP4F) followed by beta-oxidation from the w-carboxy position and after CoA ester formation. Other specific pathways of leukotriene metabolism include the 12-hydroxydehydrogenase/ 15-oxo-prostaglandin-13-reductase that form a series of conjugated diene metabolites that have been observed to be excreted into human urine. Metabolism of LTC4 occurs by sequential peptide cleavage reactions involving a gamma-glutamyl transpeptidase that forms LTD4 (leukotriene D4) and a membrane-bound dipeptidase that converts LTD4 into LTE4 (leukotriene E4) before w-oxidation. These metabolic transformations of the primary leukotrienes are critical for termination of their biological activity, and defects in expression of participating enzymes may be involved in specific genetic disease. (PMID: 12709426, 9799565, 11408337, 17623009)

同义名列表

28 个代谢物同义名

5,12,20-Trihydroxy-6,8,10,14-eicosatetraenoic acid, (S-(r*,s*-(e,Z,e,Z)))-isomer; (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-Trihydroxyeicosa-6,8,10,14-tetraenoic acid; (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-Trihydroxyicosa-6,8,10,14-tetraenoic acid; [S-[R*,s*-(e,Z,e,Z)]]-5,12,20-trihydroxy-6,8,10,14-eicosatetraenoic acid; (5S,6Z,8E,10E,12R,14Z)-5,12,20-Trihydroxyicosa-6,8,10,14-tetraenoic acid; (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-Trihydroxyeicosa-6,8,10,14-tetraenoate; (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-Trihydroxyicosa-6,8,10,14-tetraenoate; [S-[R*,s*-(e,Z,e,Z)]]-5,12,20-trihydroxy-6,8,10,14-eicosatetraenoate; (5S,6Z,8E,10E,12R,14Z)-5,12,20-Trihydroxyicosa-6,8,10,14-tetraenoate; (5S,12R)-5,12,20-Trihydroxy-(6Z,8E,10E,14Z)-eicosatetraenoic acid; 20-OH-5S,12S-Dihydroxy-6,10-trans-8,14-cis-eicosatetraenoic acid; (5S,12R)-5,12,20-Trihydroxy-(6Z,8E,10E,14Z)-eicosatetraenoate; 20-OH-5S,12S-Dihydroxy-6,10-trans-8,14-cis-eicosatetraenoate; 5S,12R,20-trihydroxy-6Z,8E,10E,14Z-eicosatetraenoic acid; 5S,12R,20-Trihydroxy-6Z,8E,10E,14Z-eicosatetraenoate; 5,12,20-trihydroxy-6,8,10,14-eicosatetraenoic acid; 20-Hydroxy-leukotriene B4; 20-Hydroxy-leukotriene b; 20-Hydroxyleukotriene b4; 20-OH-Leukotriene b4; Omega-hydroxy-LTB4; 20-Hydroxy-LTB4; LTB4_20-hydroxy; 5,12,20-TriHETE; 20-hydroxy LTB4; W-Hydroxy-LTB4; 5,12,20-THETE; 20-OH-LTB4



数据库引用编号

15 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(8)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

2 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 6 ALDH3A2, ALOX5, CYP4A11, CYP4F2, FPR1, MTOR
Peripheral membrane protein 4 ALOX5, CYP4A11, CYP4F2, MTOR
Endoplasmic reticulum membrane 5 ALDH3A2, CYP4A11, CYP4F2, LTC4S, MTOR
Nucleus 2 MPO, MTOR
cytosol 5 AKR1A1, ALDH3A2, ALOX5, MTOR, PRKCQ
dendrite 1 MTOR
phagocytic vesicle 1 MTOR
nucleoplasm 3 ALOX5, MPO, MTOR
Cell membrane 5 C5AR1, CYSLTR2, FPR1, LTB4R, TNF
Cytoplasmic side 2 ALDH3A2, MTOR
Multi-pass membrane protein 6 C5AR1, CYSLTR2, FPR1, LTB4R, LTC4S, MT-CYB
Golgi apparatus membrane 1 MTOR
Synapse 1 AKR1A1
cell surface 1 TNF
Golgi membrane 1 MTOR
lysosomal membrane 1 MTOR
mitochondrial inner membrane 1 MT-CYB
neuronal cell body 1 TNF
Cytoplasm, cytosol 2 AKR1A1, ALOX5
Lysosome 2 MPO, MTOR
plasma membrane 7 C5AR1, CYSLTR2, FPR1, LTB, LTB4R, PRKCQ, TNF
Membrane 8 ALDH3A2, CYP4A11, CYP4F2, FPR1, LTB, LTC4S, MT-CYB, MTOR
apical plasma membrane 3 AKR1A1, CYP4A11, CYP4F2
basolateral plasma membrane 1 C5AR1
extracellular exosome 4 AKR1A1, EPX, LYZ, MPO
Lysosome membrane 1 MTOR
endoplasmic reticulum 1 LTC4S
extracellular space 9 AKR1A1, ALOX5, CXCL8, EPX, IL10, LTB, LYZ, MPO, TNF
perinuclear region of cytoplasm 1 ALOX5
mitochondrion 1 MT-CYB
intracellular membrane-bounded organelle 5 ALDH3A2, CYP4A11, CYP4F2, LTC4S, MPO
Microsome membrane 4 ALDH3A2, CYP4A11, CYP4F2, MTOR
TORC1 complex 1 MTOR
TORC2 complex 1 MTOR
Secreted 2 CXCL8, IL10
extracellular region 7 ALOX5, CXCL8, EPX, IL10, LYZ, MPO, TNF
Mitochondrion outer membrane 1 MTOR
Single-pass membrane protein 1 ALDH3A2
mitochondrial outer membrane 1 MTOR
centriolar satellite 1 PRKCQ
Nucleus membrane 2 ALOX5, LTC4S
nuclear membrane 2 ALOX5, LTC4S
external side of plasma membrane 1 TNF
cytoplasmic vesicle 1 C5AR1
apical part of cell 1 C5AR1
recycling endosome 1 TNF
Single-pass type II membrane protein 2 LTB, TNF
Apical cell membrane 1 AKR1A1
Cytoplasm, perinuclear region 1 ALOX5
Mitochondrion inner membrane 1 MT-CYB
Membrane raft 1 TNF
Peroxisome 1 ALDH3A2
peroxisomal membrane 1 ALDH3A2
Nucleus, PML body 1 MTOR
PML body 1 MTOR
secretory granule 1 MPO
Nucleus outer membrane 1 LTC4S
nuclear outer membrane 1 LTC4S
phagocytic cup 1 TNF
nuclear envelope 3 ALOX5, LTC4S, MTOR
Nucleus envelope 1 ALOX5
Endomembrane system 1 MTOR
azurophil granule 1 MPO
ficolin-1-rich granule lumen 1 ALOX5
secretory granule lumen 2 ALOX5, EPX
secretory granule membrane 2 C5AR1, FPR1
nuclear matrix 1 ALOX5
specific granule lumen 1 LYZ
tertiary granule lumen 1 LYZ
azurophil granule membrane 1 FPR1
azurophil granule lumen 2 LYZ, MPO
immunological synapse 1 PRKCQ
aggresome 1 PRKCQ
Nucleus matrix 1 ALOX5
nuclear envelope lumen 1 ALOX5
respiratory chain complex III 1 MT-CYB
phagocytic vesicle lumen 1 MPO
ficolin-1-rich granule membrane 1 FPR1
Cytoplasmic vesicle, phagosome 1 MTOR
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
Nucleus intermembrane space 1 ALOX5
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Toshiaki Okuno, Yoshiko Iizuka, Hiroshi Okazaki, Takehiko Yokomizo, Ryo Taguchi, Takao Shimizu. 12(S)-Hydroxyheptadeca-5Z, 8E, 10E-trienoic acid is a natural ligand for leukotriene B4 receptor 2. The Journal of experimental medicine. 2008 Apr; 205(4):759-66. doi: 10.1084/jem.20072329. [PMID: 18378794]
  • M A Willemsen, L IJlst, P M Steijlen, J J Rotteveel, J G de Jong, P H van Domburg, E Mayatepek, F J Gabreëls, R J Wanders. Clinical, biochemical and molecular genetic characteristics of 19 patients with the Sjögren-Larsson syndrome. Brain : a journal of neurology. 2001 Jul; 124(Pt 7):1426-37. doi: 10.1093/brain/124.7.1426. [PMID: 11408337]
  • T Yokomizo, T Izumi, K Chang, Y Takuwa, T Shimizu. A G-protein-coupled receptor for leukotriene B4 that mediates chemotaxis. Nature. 1997 Jun; 387(6633):620-4. doi: 10.1038/42506. [PMID: 9177352]
  • J M Davis, R W Yurt, P S Barie, L C Hudgins, M Verma, P Dineen, G T Shires. Leukotriene B4 generation in patients with established pulmonary failure. Archives of surgery (Chicago, Ill. : 1960). 1989 Dec; 124(12):1451-5. doi: 10.1001/archsurg.1989.01410120101019. [PMID: 2556091]
  • F J Zijlstra, A M van den Broek, J E Vincent, P P Diderich, A M op de Hoek-Fes, M Claeys. Formation of leukotriene B4, 20-hydroxy leukotriene B4 and other arachidonic acid metabolites by macrophages during peritonitis in patients with continuous ambulatory peritoneal dialysis. Prostaglandins, leukotrienes, and medicine. 1987 May; 27(2-3):151-60. doi: 10.1016/0262-1746(87)90067-9. [PMID: 3039532]
  • R M Clancy, C A Dahinden, T E Hugli. Oxidation of leukotrienes at the omega end: demonstration of a receptor for the 20-hydroxy derivative of leukotriene B4 on human neutrophils and implications for the analysis of leukotriene receptors. Proceedings of the National Academy of Sciences of the United States of America. 1984 Sep; 81(18):5729-33. doi: 10.1073/pnas.81.18.5729. [PMID: 6091105]
  • R D Camp, P M Woollard, A I Mallet, N J Fincham, A W Ford-Hutchinson, M A Bray. Neutrophil aggregating and chemokinetic properties of a 5,12,20-trihydroxy-6,8,10,14-eicosatetraenoic acid isolated from human leukocytes. Prostaglandins. 1982 May; 23(5):631-41. doi: 10.1016/s0090-6980(82)80003-8. [PMID: 6289379]