Tyrocidine A (BioDeep_00000843608)

   


代谢物信息卡片


Tyrocidine A

化学式: C66H87N13O13 (1269.6546)
中文名称:
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: CC(C)CC1C(=O)NC(C(=O)N2CCCC2C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N1)CCCN)C(C)C)CC3=CC=C(C=C3)O)CCC(=O)N)CC(=O)N)CC4=CC=CC=C4)CC5=CC=CC=C5)CC6=CC=CC=C6
InChI: InChI=1S/C66H87N13O13/c1-38(2)32-47-59(85)77-52(36-42-20-12-7-13-21-42)66(92)79-31-15-23-53(79)64(90)76-49(34-41-18-10-6-11-19-41)61(87)74-48(33-40-16-8-5-9-17-40)60(86)75-51(37-55(69)82)62(88)70-46(28-29-54(68)81)58(84)73-50(35-43-24-26-44(80)27-25-43)63(89)78-56(39(3)4)65(91)71-45(22-14-30-67)57(83)72-47/h5-13,16-21,24-27,38-39,45-53,56,80H,14-15,22-23,28-37,67H2,1-4H3,(H2,68,81)(H2,69,82)(H,70,88)(H,71,91)(H,72,83)(H,73,84)(H,74,87)(H,75,86)(H,76,90)(H,77,85)(H,78,89)/t45-,46-,47-,48+,49-,50-,51-,52+,53-,56-/m0/s1

描述信息

D000890 - Anti-Infective Agents > D000900 - Anti-Bacterial Agents

同义名列表

2 个代谢物同义名

Tyrocidine A; Tyrocidine



数据库引用编号

9 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 10 ACE2, CASP3, EGFR, EP300, ERBB2, MARVELD1, PIK3CA, PPARG, PPP1R1B, SMAD2
Peripheral membrane protein 1 ACHE
Endosome membrane 2 EGFR, ERBB2
Endoplasmic reticulum membrane 2 EGFR, MR1
Nucleus 10 ACHE, CASP3, EGFR, EP300, ERBB2, MARVELD1, MR1, PPARG, PPP1R1B, SMAD2
cytosol 7 CASP3, EP300, ERBB2, PIK3CA, PPARG, PPP1R1B, SMAD2
nucleoplasm 5 CASP3, EP300, ERBB2, PPARG, SMAD2
RNA polymerase II transcription regulator complex 1 PPARG
Cell membrane 8 ACE2, ACHE, CLDN1, EGFR, ERBB2, MARVELD1, MR1, TRPC7
lamellipodium 1 PIK3CA
ruffle membrane 2 EGFR, ERBB2
Early endosome membrane 2 EGFR, MR1
Multi-pass membrane protein 3 CLDN1, MARVELD1, TRPC7
Golgi apparatus membrane 1 MR1
Synapse 1 ACHE
cell junction 1 EGFR
cell surface 3 ACE2, ACHE, EGFR
glutamatergic synapse 2 CASP3, EGFR
Golgi apparatus 1 ACHE
Golgi membrane 3 EGFR, INS, MR1
lysosomal membrane 1 TRPC7
neuromuscular junction 2 ACHE, ERBB2
neuronal cell body 2 CASP3, PPP1R1B
presynaptic membrane 1 ERBB2
Lysosome 1 TRPC7
endosome 1 EGFR
plasma membrane 9 ACE2, ACHE, CLDN1, EGFR, ERBB2, MARVELD1, MR1, PIK3CA, TRPC7
Membrane 9 ACE2, ACHE, CLDN1, EGFR, ERBB2, MARVELD1, MR1, SMAD2, TRPC7
apical plasma membrane 4 ACE2, CLDN1, EGFR, ERBB2
basolateral plasma membrane 3 CLDN1, EGFR, ERBB2
extracellular exosome 2 ACE2, MMP9
endoplasmic reticulum 1 MR1
extracellular space 8 ACE2, ACHE, CCL2, EGFR, INS, MMP9, MR1, PTH
perinuclear region of cytoplasm 6 ACHE, EGFR, ERBB2, PIK3CA, PPARG, TRPC7
Cell junction, tight junction 1 CLDN1
bicellular tight junction 1 CLDN1
intercalated disc 1 PIK3CA
mitochondrion 1 MR1
protein-containing complex 3 CLDN1, EGFR, SMAD2
intracellular membrane-bounded organelle 1 PPARG
postsynaptic density 1 CASP3
Single-pass type I membrane protein 4 ACE2, EGFR, ERBB2, MR1
Secreted 4 ACE2, ACHE, CCL2, INS
extracellular region 7 ACE2, ACHE, CCL2, ERBB2, INS, MMP9, PTH
Single-pass membrane protein 1 MR1
Extracellular side 1 ACHE
transcription regulator complex 2 EP300, SMAD2
Cell projection, cilium 1 ACE2
nuclear membrane 1 EGFR
external side of plasma membrane 1 MR1
Secreted, extracellular space, extracellular matrix 1 MMP9
perikaryon 1 TRPC7
cytoplasmic vesicle 2 ERBB2, TRPC7
Early endosome 1 ERBB2
Apical cell membrane 1 ACE2
Cell projection, ruffle membrane 1 ERBB2
Cytoplasm, perinuclear region 1 ERBB2
Membrane raft 2 ACE2, EGFR
Cytoplasm, cytoskeleton 1 MARVELD1
focal adhesion 1 EGFR
basement membrane 1 ACHE
intracellular vesicle 1 EGFR
collagen-containing extracellular matrix 1 MMP9
lateral plasma membrane 1 CLDN1
receptor complex 3 EGFR, ERBB2, PPARG
cilium 1 ACE2
chromatin 3 EP300, PPARG, SMAD2
Late endosome membrane 1 MR1
cell projection 1 TRPC7
Chromosome 1 EP300
cytoskeleton 1 MARVELD1
brush border membrane 1 ACE2
Basolateral cell membrane 1 CLDN1
Lipid-anchor, GPI-anchor 1 ACHE
[Isoform 2]: Cell membrane 1 TRPC7
nuclear envelope 1 TRPC7
Nucleus envelope 1 TRPC7
endosome lumen 1 INS
Cytoplasmic vesicle membrane 1 TRPC7
specific granule membrane 1 TRPC7
tertiary granule membrane 1 TRPC7
side of membrane 1 ACHE
myelin sheath 1 ERBB2
basal plasma membrane 2 EGFR, ERBB2
synaptic membrane 1 EGFR
ficolin-1-rich granule lumen 1 MMP9
secretory granule lumen 1 INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 2 ACE2, INS
phosphatidylinositol 3-kinase complex 1 PIK3CA
phosphatidylinositol 3-kinase complex, class IA 1 PIK3CA
tertiary granule lumen 1 MMP9
endocytic vesicle membrane 1 ACE2
transport vesicle 1 INS
tight junction 1 CLDN1
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
semaphorin receptor complex 1 ERBB2
clathrin-coated endocytic vesicle membrane 1 EGFR
heteromeric SMAD protein complex 1 SMAD2
SMAD protein complex 1 SMAD2
synaptic cleft 1 ACHE
histone acetyltransferase complex 1 EP300
protein-DNA complex 1 EP300
ficolin-1-rich granule membrane 1 TRPC7
death-inducing signaling complex 1 CASP3
[Isoform 1]: Cell membrane 3 ERBB2, MR1, TRPC7
[Isoform 4]: Secreted 1 MR1
activin responsive factor complex 1 SMAD2
presynaptic cytosol 1 MR1
[Isoform 3]: Cell membrane 2 MR1, TRPC7
multivesicular body, internal vesicle lumen 1 EGFR
Shc-EGFR complex 1 EGFR
MHC class I protein complex 1 MR1
ERBB3:ERBB2 complex 1 ERBB2
[Isoform H]: Cell membrane 1 ACHE
phosphatidylinositol 3-kinase complex, class IB 1 PIK3CA
cation channel complex 1 TRPC7
homomeric SMAD protein complex 1 SMAD2
[Processed angiotensin-converting enzyme 2]: Secreted 1 ACE2
[Isoform 2]: Apical cell membrane 1 ACE2


文献列表

  • Juan Li, Zhengcai Ma, Zhipeng Yang, Maochun Yang, Changsheng Li, Mengmeng Li, Xiaoduo Li, Xiantao Chen, Hang Ma, Wanqun Chen, Xiaoli Ye, Xuegang Li. Integrating transcriptomics and network pharmacology to reveal the mechanisms of total Rhizoma Coptidis alkaloids against nonalcoholic steatohepatitis. Journal of ethnopharmacology. 2024 Mar; 322(?):117600. doi: 10.1016/j.jep.2023.117600. [PMID: 38103844]
  • Zeng Zhang, Xiaodong Fu, Fengzhu Zhou, Duanchun Zhang, Yanqiu Xu, Zhaohua Fan, Shimei Wen, Yanting Shao, Zheng Yao, Yanming He. Huaju Xiaoji Formula Regulates ERS-lncMGC/miRNA to Enhance the Renal Function of Hypertensive Diabetic Mice with Nephropathy. Journal of diabetes research. 2024; 2024(?):6942156. doi: 10.1155/2024/6942156. [PMID: 38282657]
  • Jibao Zhu, Chengfei Hu, Zizhen Zeng, Xiaoyu Deng, Lingbing Zeng, Saisai Xie, Yuanying Fang, Yi Jin, Valérie Alezra, Yang Wan. Polymyxin B-inspired non-hemolytic tyrocidine A analogues with significantly enhanced activity against gram-negative bacteria: How cationicity impacts cell specificity and antibacterial mechanism. European journal of medicinal chemistry. 2021 Oct; 221(?):113488. doi: 10.1016/j.ejmech.2021.113488. [PMID: 33991963]
  • Michaela Wenzel, Marina Rautenbach, J Arnold Vosloo, Tjalling Siersma, Christopher H M Aisenbrey, Ekaterina Zaitseva, Wikus E Laubscher, Wilma van Rensburg, Jan C Behrends, Burkhard Bechinger, Leendert W Hamoen. The Multifaceted Antibacterial Mechanisms of the Pioneering Peptide Antibiotics Tyrocidine and Gramicidin S. mBio. 2018 10; 9(5):. doi: 10.1128/mbio.00802-18. [PMID: 30301848]
  • Xu Yang, Ahmed E Yousef. Antimicrobial peptides produced by Brevibacillus spp.: structure, classification and bioactivity: a mini review. World journal of microbiology & biotechnology. 2018 Mar; 34(4):57. doi: 10.1007/s11274-018-2437-4. [PMID: 29594558]
  • Marina Rautenbach, Anscha M Troskie, Johan A Vosloo, Margitta E Dathe. Antifungal membranolytic activity of the tyrocidines against filamentous plant fungi. Biochimie. 2016 Nov; 130(?):122-131. doi: 10.1016/j.biochi.2016.06.008. [PMID: 27328781]
  • Anscha Mari Troskie, Marina Rautenbach, Nicolas Delattin, Johan Arnold Vosloo, Margitta Dathe, Bruno P A Cammue, Karin Thevissen. Synergistic activity of the tyrocidines, antimicrobial cyclodecapeptides from Bacillus aneurinolyticus, with amphotericin B and caspofungin against Candida albicans biofilms. Antimicrobial agents and chemotherapy. 2014 Jul; 58(7):3697-707. doi: 10.1128/aac.02381-14. [PMID: 24752256]
  • R Zuo, D Ornek, B C Syrett, R M Green, C-H Hsu, F B Mansfeld, T K Wood. Inhibiting mild steel corrosion from sulfate-reducing bacteria using antimicrobial-producing biofilms in Three-Mile-Island process water. Applied microbiology and biotechnology. 2004 Apr; 64(2):275-83. doi: 10.1007/s00253-003-1403-7. [PMID: 12898064]
  • F J Aranda, B de Kruijff. Interrelationships between tyrocidine and gramicidin A' in their interaction with phospholipids in model membranes. Biochimica et biophysica acta. 1988 Jan; 937(1):195-203. doi: 10.1016/0005-2736(88)90241-6. [PMID: 2446665]