D-Arabinose 5-phosphate (BioDeep_00001868829)

Main id: BioDeep_00000003354

 

PANOMIX_OTCML-2023


代谢物信息卡片


aldehydo-D-arabinose 5-phosphate

化学式: C5H11O8P (230.0192)
中文名称:
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C(C(C(C(C=O)O)O)O)OP(=O)(O)O
InChI: InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h1,3-5,7-9H,2H2,(H2,10,11,12)/t3-,4-,5+/m1/s1

描述信息

The 5-phospho derivative of D-arabinose. It is an intermediate in the synthesis of lipopolysaccharides.

同义名列表

3 个代谢物同义名

aldehydo-D-arabinose 5-phosphate; D-Arabinose 5-phosphate; D-Arabinose 5-phosphate



数据库引用编号

10 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

0 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 4 CBS, GPI, HTT, PTPRF
Endosome membrane 1 HTT
Endoplasmic reticulum membrane 1 TKT
Nucleus 3 CBS, HTT, ZNF79
autophagosome 1 HTT
cytosol 5 CBS, FN3K, GPI, HTT, TKT
dendrite 1 HTT
nuclear body 1 TKT
nucleoplasm 3 CD2, HTT, TKT
Cell membrane 5 ASIC2, CD2, HTT, PTGDR2, TKT
Multi-pass membrane protein 3 ASIC2, HTT, PTGDR2
Synapse 1 HTT
cell surface 1 CD2
Golgi apparatus 2 CD2, HTT
neuronal cell body 2 ASIC2, PTPRF
presynaptic membrane 1 HTT
plasma membrane 6 ASIC2, CD2, HTT, PTGDR2, PTPRF, TKT
Membrane 2 GPI, PTPRF
apical plasma membrane 1 TKT
axon 1 HTT
extracellular exosome 4 GPI, LYZ, PTPRF, TKT
endoplasmic reticulum 1 HTT
extracellular space 2 GPI, LYZ
perinuclear region of cytoplasm 1 HTT
mitochondrion 1 MDP1
protein-containing complex 3 CD2, HTT, MDP1
intracellular membrane-bounded organelle 1 MDP1
Single-pass type I membrane protein 2 CD2, TKT
Secreted 1 GPI
extracellular region 3 CD2, GPI, LYZ
cytoplasmic side of plasma membrane 1 CD2
Single-pass membrane protein 1 PTPRF
mitochondrial matrix 1 MDP1
ciliary membrane 1 GPI
external side of plasma membrane 1 CD2
actin cytoskeleton 1 TKT
dendritic spine 1 ASIC2
Early endosome 1 HTT
cell-cell junction 1 CD2
vesicle 1 TKT
postsynaptic membrane 1 HTT
Membrane raft 1 HTT
Cell junction, focal adhesion 1 HTT
focal adhesion 2 HTT, TKT
mitochondrial nucleoid 1 MDP1
Peroxisome 1 TKT
Late endosome 1 HTT
receptor complex 1 TKT
Cell projection, neuron projection 1 HTT
neuron projection 3 HTT, PTGDR2, PTPRF
centriole 1 HTT
Endomembrane system 1 HTT
Cytoplasmic vesicle membrane 1 HTT
ficolin-1-rich granule lumen 1 GPI
secretory granule lumen 1 GPI
specific granule lumen 1 LYZ
tertiary granule lumen 1 LYZ
azurophil granule lumen 1 LYZ
postsynaptic density membrane 1 ASIC2
postsynaptic cytosol 1 HTT
presynaptic cytosol 1 HTT
inclusion body 1 HTT
serotonergic synapse 1 HTT
Mitochondrion matrix, mitochondrion nucleoid 1 MDP1
[Huntingtin]: Cytoplasm 1 HTT
[Huntingtin, myristoylated N-terminal fragment]: Cytoplasmic vesicle, autophagosome 1 HTT
gamma DNA polymerase complex 1 MDP1
mitochondrial chromosome 1 MDP1


文献列表

  • K K Arora, J F Williams. Introduction and metabolism of pentose and hexose phosphates in permeabilized Morris hepatoma 5123TC cells. Cell biochemistry and function. 1987 Oct; 5(4):289-300. doi: 10.1002/cbf.290050408. [PMID: 2445500]
  • P D Rick, D A Young. Relationship between cell death and altered lipid A synthesis in a temperature-sensitive lethal mutant of Salmonella typhimurium that is conditionally defective in 3-deoxy-D-manno-octulosonate-8-phosphate synthesis. Journal of bacteriology. 1982 May; 150(2):456-64. doi: 10.1128/jb.150.2.456-464.1982. [PMID: 7040336]