Vinyl ether (BioDeep_00001868292)

Main id: BioDeep_00000011851

 


代谢物信息卡片


Vinyl ether

化学式: C4H6O (70.0419)
中文名称: 乙烯醚, 乙烯基醚
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C=COC=C
InChI: InChI=1S/C4H6O/c1-3-5-4-2/h3-4H,1-2H2

描述信息

D002491 - Central Nervous System Agents > D002492 - Central Nervous System Depressants > D000777 - Anesthetics
N - Nervous system > N01 - Anesthetics > N01A - Anesthetics, general > N01AA - Ethers

同义名列表

3 个代谢物同义名

Vinyl ether; Vinyl ether; Vinyl ether



数据库引用编号

10 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

0 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 7 ALB, BDNF, HAP1, PLA2G12A, PLA2G4A, PLA2G6, TMEM86B
Peripheral membrane protein 3 CLTB, COQ10A, GNPAT
Endoplasmic reticulum membrane 3 HSP90B1, PLA2G4A, TMEM86B
Cytoplasmic vesicle, autophagosome 1 HAP1
Nucleus 6 ALB, HAP1, HSP90B1, MPO, PLA2G4A, SLC25A5
autophagosome 1 HAP1
cytosol 7 ALB, CLTB, GNPAT, HAP1, HSP90B1, PLA2G4A, PLA2G6
dendrite 2 BDNF, HAP1
mitochondrial membrane 1 GNPAT
trans-Golgi network 1 CLTB
centrosome 2 ALB, HAP1
nucleoplasm 2 HAP1, MPO
Cell membrane 3 PLA2G6, SLC38A5, TNF
Cytoplasmic side 1 CLTB
Cell projection, axon 1 HAP1
Cell projection, growth cone 1 HAP1
Multi-pass membrane protein 4 SLC25A5, SLC38A5, TMEM86B, TPRA1
Golgi apparatus membrane 2 MGAT1, PLA2G4A
cell surface 1 TNF
Golgi apparatus 3 ALB, MGAT1, PLA2G4A
Golgi membrane 2 MGAT1, PLA2G4A
growth cone 1 HAP1
mitochondrial inner membrane 3 COQ10A, PLA2G4A, SLC25A5
neuronal cell body 1 TNF
smooth endoplasmic reticulum 1 HSP90B1
synaptic vesicle 2 BDNF, HAP1
Lysosome 2 HAP1, MPO
Presynapse 1 HAP1
plasma membrane 7 CLTB, IFNLR1, PLA2G6, SLC25A5, SLC38A5, TNF, TPRA1
synaptic vesicle membrane 1 CLTB
Membrane 10 BDNF, GNPAT, HSP90B1, IFNLR1, MGAT1, PLA2G6, SLC25A5, SLC38A5, TMEM86B, TPRA1
axon 1 BDNF
extracellular exosome 5 ALB, EPX, HSP90B1, MGAT1, MPO
endoplasmic reticulum 4 ALB, HAP1, HSP90B1, PLA2G4A
extracellular space 6 ALB, BDNF, EPX, MPO, PLA2G6, TNF
perinuclear region of cytoplasm 4 BDNF, HAP1, HSP90B1, MGAT1
mitochondrion 4 COQ10A, HAP1, PLA2G6, SLC25A5
protein-containing complex 2 ALB, HSP90B1
intracellular membrane-bounded organelle 3 CLTB, MPO, PLA2G4A
Single-pass type I membrane protein 1 IFNLR1
Secreted 3 ALB, BDNF, PLA2G12A
extracellular region 7 ALB, BDNF, EPX, HSP90B1, MPO, PLA2G12A, TNF
Single-pass membrane protein 1 FAR1
anchoring junction 1 ALB
ciliary membrane 1 CLTB
external side of plasma membrane 1 TNF
Extracellular vesicle 1 MGAT1
actin cytoskeleton 1 HAP1
dendritic spine 1 HAP1
cytoplasmic vesicle 1 HAP1
microtubule cytoskeleton 1 PLA2G6
nucleolus 1 HAP1
axon cytoplasm 1 HAP1
midbody 1 HSP90B1
Early endosome 1 HAP1
recycling endosome 1 TNF
Single-pass type II membrane protein 2 MGAT1, TNF
Cytoplasm, perinuclear region 1 MGAT1
Mitochondrion inner membrane 2 COQ10A, SLC25A5
Matrix side 2 COQ10A, GNPAT
Membrane raft 1 TNF
Cytoplasm, cytoskeleton 1 HAP1
focal adhesion 1 HSP90B1
mitochondrial nucleoid 1 SLC25A5
Peroxisome 2 FAR1, GNPAT
peroxisomal matrix 1 GNPAT
peroxisomal membrane 2 FAR1, GNPAT
Cell projection, dendritic spine 1 HAP1
collagen-containing extracellular matrix 1 HSP90B1
secretory granule 1 MPO
nuclear speck 2 HAP1, PLA2G6
Cell projection, neuron projection 1 HAP1
ciliary basal body 1 ALB
phagocytic cup 1 TNF
cytoskeleton 1 HAP1
centriole 2 ALB, HAP1
spindle pole 1 ALB
chromosome, telomeric region 1 HAP1
blood microparticle 1 ALB
nuclear envelope 1 PLA2G4A
Endomembrane system 1 GNPAT
Cytoplasmic vesicle membrane 1 CLTB
Cell projection, dendrite 1 HAP1
Melanosome 1 HSP90B1
sperm plasma membrane 1 HSP90B1
pseudopodium 1 PLA2G6
Peroxisome membrane 2 FAR1, GNPAT
azurophil granule 1 MPO
secretory granule lumen 1 EPX
endoplasmic reticulum lumen 3 ALB, BDNF, HSP90B1
platelet alpha granule lumen 1 ALB
azurophil granule lumen 1 MPO
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 MGAT1
clathrin-coated endocytic vesicle 1 CLTB
Sarcoplasmic reticulum lumen 1 HSP90B1
phagocytic vesicle lumen 1 MPO
clathrin coat of coated pit 1 CLTB
Membrane, coated pit 1 CLTB
Cell projection, pseudopodium 1 PLA2G6
MMXD complex 1 SLC25A5
clathrin vesicle coat 1 CLTB
clathrin coat of trans-Golgi network vesicle 1 CLTB
endocytic vesicle lumen 1 HSP90B1
ribosome 1 HAP1
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
inclusion body 1 HAP1
mitochondrial permeability transition pore complex 1 SLC25A5
Cytoplasmic vesicle, secretory vesicle, synaptic vesicle 1 HAP1
endoplasmic reticulum chaperone complex 1 HSP90B1
clathrin coat 1 CLTB
postsynaptic endocytic zone cytoplasmic component 1 CLTB
presynaptic endocytic zone membrane 1 CLTB
[Neurotrophic factor BDNF precursor form]: Secreted 1 BDNF
ciliary transition fiber 1 ALB
interleukin-28 receptor complex 1 IFNLR1
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Marcos A Perez, Andrea J Clostio, Isabel R Houston, Jimena Ruiz, Leslie Magtanong, Scott J Dixon, Jennifer L Watts. Ether lipid deficiency disrupts lipid homeostasis leading to ferroptosis sensitivity. PLoS genetics. 2022 09; 18(9):e1010436. doi: 10.1371/journal.pgen.1010436. [PMID: 36178986]
  • Ernst R Werner, Markus A Keller, Sabrina Sailer, Katharina Lackner, Jakob Koch, Martin Hermann, Stefan Coassin, Georg Golderer, Gabriele Werner-Felmayer, Raphael A Zoeller, Nicolas Hulo, Johannes Berger, Katrin Watschinger. The TMEM189 gene encodes plasmanylethanolamine desaturase which introduces the characteristic vinyl ether double bond into plasmalogens. Proceedings of the National Academy of Sciences of the United States of America. 2020 04; 117(14):7792-7798. doi: 10.1073/pnas.1917461117. [PMID: 32209662]
  • Wedad Fallatah, Tara Smith, Wei Cui, Dushmanthi Jayasinghe, Erminia Di Pietro, Shawn A Ritchie, Nancy Braverman. Oral administration of a synthetic vinyl-ether plasmalogen normalizes open field activity in a mouse model of rhizomelic chondrodysplasia punctata. Disease models & mechanisms. 2020 01; 13(1):. doi: 10.1242/dmm.042499. [PMID: 31862688]
  • Howard Goldfine. Cytochrome c takes on plasmalogen catabolism. The Journal of biological chemistry. 2018 06; 293(22):8710-8711. doi: 10.1074/jbc.h118.003072. [PMID: 29858391]
  • Ernst R Werner, Markus A Keller, Sabrina Sailer, Daniele Seppi, Georg Golderer, Gabriele Werner-Felmayer, Raphael A Zoeller, Katrin Watschinger. A novel assay for the introduction of the vinyl ether double bond into plasmalogens using pyrene-labeled substrates. Journal of lipid research. 2018 05; 59(5):901-909. doi: 10.1194/jlr.d080283. [PMID: 29540573]
  • Fernando Martínez-Montañés, Museer A Lone, Fong-Fu Hsu, Roger Schneiter. Accumulation of long-chain bases in yeast promotes their conversion to a long-chain base vinyl ether. Journal of lipid research. 2016 11; 57(11):2040-2050. doi: 10.1194/jlr.m070748. [PMID: 27561298]
  • Svetlana S Gorina, Yana Y Toporkova, Lucia S Mukhtarova, Elena O Smirnova, Ivan R Chechetkin, Bulat I Khairutdinov, Yuri V Gogolev, Alexander N Grechkin. Oxylipin biosynthesis in spikemoss Selaginella moellendorffii: Molecular cloning and identification of divinyl ether synthases CYP74M1 and CYP74M3. Biochimica et biophysica acta. 2016 Apr; 1861(4):301-9. doi: 10.1016/j.bbalip.2016.01.001. [PMID: 26776054]
  • Anna V Ogorodnikova, Fakhima K Mukhitova, Alexander N Grechkin. Oxylipins in the spikemoss Selaginella martensii: Detection of divinyl ethers, 12-oxophytodienoic acid and related cyclopentenones. Phytochemistry. 2015 Oct; 118(?):42-50. doi: 10.1016/j.phytochem.2015.08.003. [PMID: 26277770]
  • Xiaoyun Zhang, Ting Dong, Qiang Li, Xiaohui Liu, Lin Li, She Chen, Xiaoguang Lei. Second Generation TQ-Ligation for Cell Organelle Imaging. ACS chemical biology. 2015 Jul; 10(7):1676-83. doi: 10.1021/acschembio.5b00193. [PMID: 25901763]
  • Kui Yang, Christopher M Jenkins, Beverly Dilthey, Richard W Gross. Multidimensional mass spectrometry-based shotgun lipidomics analysis of vinyl ether diglycerides. Analytical and bioanalytical chemistry. 2015 Jul; 407(17):5199-210. doi: 10.1007/s00216-015-8640-3. [PMID: 25822162]
  • Gabriele Quandt, Georg Höfner, Klaus T Wanner. Synthesis and evaluation of N-substituted nipecotic acid derivatives with an unsymmetrical bis-aromatic residue attached to a vinyl ether spacer as potential GABA uptake inhibitors. Bioorganic & medicinal chemistry. 2013 Jun; 21(11):3363-78. doi: 10.1016/j.bmc.2013.02.056. [PMID: 23598250]
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