Hygromycin A (BioDeep_00000011767)
代谢物信息卡片
C2-epi-Hygromycin A
化学式: C23H29NO12 (511.16896740000004)
中文名称:
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: CC(=CC1=CC(=C(C=C1)OC2C(C(C(O2)C(=O)C)O)O)O)C(=O)NC3C(C(C4C(C3O)OCO4)O)O
InChI: InChI=1S/C23H29NO12/c1-8(22(32)24-13-14(27)16(29)21-20(15(13)28)33-7-34-21)5-10-3-4-12(11(26)6-10)35-23-18(31)17(30)19(36-23)9(2)25/h3-6,13-21,23,26-31H,7H2,1-2H3,(H,24,32)/b8-5+/t13-,14+,15-,16-,17+,18+,19-,20+,21-,23-/m1/s1
描述信息
A natural product found in Streptomyces species.
同义名列表
2 个代谢物同义名
数据库引用编号
12 个数据库交叉引用编号
- ChEBI: CHEBI:69414
- KEGG: C17579
- PubChem: 6433481
- PubChem: 72972433
- Metlin: METLIN71788
- ChEMBL: CHEMBL267436
- KNApSAcK: C00018293
- CAS: 6379-56-2
- PMhub: MS000025915
- MetaboLights: MTBLC69414
- PubChem: 96023924
- NIKKAJI: J152.079B
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
10 个相关的物种来源信息
- 43767 Rhodococcus equi: 10.7164/ANTIBIOTICS.33.695
- 67337 Streptomyces noboritoensis: 10.7164/ANTIBIOTICS.33.695
- 1912 Streptomyces hygroscopicus: 10.1021/JA01558A031
- 1883 Streptomyces: 10.1021/NP200470U
- 1912 Streptomyces hygroscopicus: 10.1271/BBB.65.1252
- 43767 Rhodococcus equi: 10.7164/ANTIBIOTICS.33.695
- 67337 Streptomyces noboritoensis: 10.7164/ANTIBIOTICS.33.695
- 1912 Streptomyces hygroscopicus: 10.1021/JA01558A031
- 1883 Streptomyces: 10.1021/NP200470U
- 1912 Streptomyces hygroscopicus: 10.1271/BBB.65.1252
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
文献列表
- Yuling Tai, Jie Zhang, Youhui Chen, Yi Yuan, Honggang Wang, Luyao Yu, Shuangshuang Li, Lu Yang, Yifan Jin. Establishment and validation of a callus tissue transformation system for German chamomile (Matricaria chamomilla L.).
BMC plant biology.
2023 Dec; 23(1):659. doi:
10.1186/s12870-023-04680-3. [PMID: 38124039] - Amin-Asyraf Tamizi, Anis Afuza Md-Yusof, Nurul Asyikin Mohd-Zim, Nazrul Hisham Nazaruddin, Rogayah Sekeli, Zarina Zainuddin, Nurul Hidayah Samsulrizal. Agrobacterium-mediated in planta transformation of cut coleoptile: a new, simplified, and tissue culture-independent method to deliver the CRISPR/Cas9 system in rice.
Molecular biology reports.
2023 Nov; 50(11):9353-9366. doi:
10.1007/s11033-023-08842-2. [PMID: 37819494] - Mohammad Hossein Mirzaee, Masoumeh Emadpour. Advances in the Transformation of Cyclamen persicum Mill. Through Direct Regeneration Based on an Optimized Kanamycin Selection Scheme.
Molecular biotechnology.
2023 May; ?(?):. doi:
10.1007/s12033-023-00758-3. [PMID: 37133706] - Ali Izadi-Darbandi, Hussien Alameldin, Nima Namjoo, Khalil Ahmad. Introducing sorghum DREB2 gene in maize (Zea mays L.) to improve drought and salinity tolerance.
Biotechnology and applied biochemistry.
2023 Mar; ?(?):. doi:
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PloS one.
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Plant cell reports.
2008 Mar; 27(3):489-98. doi:
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Plant cell reports.
2007 Sep; 26(9):1585-93. doi:
10.1007/s00299-007-0382-z. [PMID: 17541598] - Leland J Cseke, Sarah Beth Cseke, Gopi K Podila. High efficiency poplar transformation.
Plant cell reports.
2007 Sep; 26(9):1529-38. doi:
10.1007/s00299-007-0365-0. [PMID: 17492451] - Young Soon Kim, Yong In Kuk, Kyung-Moon Kim. Inheritance and expression of transgenes through anther culture of transgenic hot pepper.
Zeitschrift fur Naturforschung. C, Journal of biosciences.
2007 Sep; 62(9-10):743-6. doi:
10.1515/znc-2007-9-1018. [PMID: 18069249] - Dong Poh Chin, Kei-ichiro Mishiba, Masahiro Mii. Agrobacterium-mediated transformation of protocorm-like bodies in Cymbidium.
Plant cell reports.
2007 Jun; 26(6):735-43. doi:
10.1007/s00299-006-0284-5. [PMID: 17205333] - Wei Tang, Jinxing Lin, Ronald J Newton. Okadaic acid and trifluoperazine enhance Agrobacterium-mediated transformation in eastern white pine.
Plant cell reports.
2007 May; 26(5):673-82. doi:
10.1007/s00299-006-0270-y. [PMID: 17242943] - Derek H Wells, Esther J Chen, Robert F Fisher, Sharon R Long. ExoR is genetically coupled to the ExoS-ChvI two-component system and located in the periplasm of Sinorhizobium meliloti.
Molecular microbiology.
2007 May; 64(3):647-64. doi:
10.1111/j.1365-2958.2007.05680.x. [PMID: 17462014] - Paoyuan Hsiao, Sanjaya, Ruey-Chih Su, Jaime A Teixeira da Silva, Ming-Tsair Chan. Plant native tryptophan synthase beta 1 gene is a non-antibiotic selection marker for plant transformation.
Planta.
2007 Mar; 225(4):897-906. doi:
10.1007/s00425-006-0405-y. [PMID: 17039373] - Satu Lyyra, Richard B Meagher, Tehryung Kim, Andrew Heaton, Paul Montello, Rebecca S Balish, Scott A Merkle. Coupling two mercury resistance genes in Eastern cottonwood enhances the processing of organomercury.
Plant biotechnology journal.
2007 Mar; 5(2):254-62. doi:
10.1111/j.1467-7652.2006.00236.x. [PMID: 17309680] - Jingxue Wang, Yi Sun, Yi Li. Maize (Zea mays) genetic transformation by co-cultivating germinating seeds with Agrobacterium tumefaciens.
Biotechnology and applied biochemistry.
2007 Jan; 46(Pt 1):51-5. doi:
10.1042/ba20060065. [PMID: 16922678] - Lydie Maresova, Hana Sychrova. Arabidopsis thaliana CHX17 gene complements the kha1 deletion phenotypes in Saccharomyces cerevisiae.
Yeast (Chichester, England).
2006 Dec; 23(16):1167-71. doi:
10.1002/yea.1424. [PMID: 17133624] - Teruko Oosumi, Hope A Gruszewski, Leslie A Blischak, Aaron J Baxter, Phillip A Wadl, Joel L Shuman, Richard E Veilleux, Vladimir Shulaev. High-efficiency transformation of the diploid strawberry (Fragaria vesca) for functional genomics.
Planta.
2006 May; 223(6):1219-30. doi:
10.1007/s00425-005-0170-3. [PMID: 16320068] - Estelle Gewiss Mogensen, Michael P Challen, Richard N Strange. Reduction in solanapyrone phytotoxin production by Ascochyta rabiei transformed with Agrobacterium tumefaciens.
FEMS microbiology letters.
2006 Feb; 255(2):255-61. doi:
10.1111/j.1574-6968.2005.00083.x. [PMID: 16448503] - Mei Ru Li, Hong Qing Li, Guo Jiang Wu. [Study on factors influencing Agrobacterium-mediated transformation of Jatropha curcas].
Fen zi xi bao sheng wu xue bao = Journal of molecular cell biology.
2006 Feb; 39(1):83-9. doi:
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Journal of biochemistry and molecular biology.
2006 Jan; 39(1):61-7. doi:
10.5483/bmbrep.2006.39.1.061. [PMID: 16466639] - Ming-Xia Cao, Jian-Qiu Huang, Quan-Hong Yao, Sheng-Jun Liu, Cheng-Long Wang, Zhi-Ming Wei. Site-specific DNA excision in transgenic rice with a cell-permeable cre recombinase.
Molecular biotechnology.
2006 Jan; 32(1):55-63. doi:
10.1385/mb:32:1:055. [PMID: 16382182] - P R LaFayette, P M Kane, B H Phan, W A Parrott. Arabitol dehydrogenase as a selectable marker for rice.
Plant cell reports.
2005 Dec; 24(10):596-602. doi:
10.1007/s00299-005-0015-3. [PMID: 16151815] - Jitendra Kumar, Sharad M Shukla, Vishnu Bhat, Sanjay Gupta, M G Gupta. In vitro plant regeneration and genetic transformation of Dichanthium annulatum.
DNA and cell biology.
2005 Nov; 24(11):670-9. doi:
10.1089/dna.2005.24.670. [PMID: 16274291] - Yoshiteru Noutoshi, Takuya Ito, Kazuo Shinozaki. ALBINO AND PALE GREEN 10 encodes BBMII isomerase involved in histidine biosynthesis in Arabidopsis thaliana.
Plant & cell physiology.
2005 Jul; 46(7):1165-72. doi:
10.1093/pcp/pci119. [PMID: 15870096] - Kei-ichiro Mishiba, Dong Poh Chin, Masahiro Mii. Agrobacterium-mediated transformation of Phalaenopsis by targeting protocorms at an early stage after germination.
Plant cell reports.
2005 Jul; 24(5):297-303. doi:
10.1007/s00299-005-0938-8. [PMID: 15800779] - M Sujatha, M Sailaja. Stable genetic transformation of castor (Ricinus communis L.) via Agrobacterium tumefaciens-mediated gene transfer using embryo axes from mature seeds.
Plant cell reports.
2005 Mar; 23(12):803-10. doi:
10.1007/s00299-004-0898-4. [PMID: 15580353] - Zeng-Yu Wang, Yaxin Ge. Agrobacterium-mediated high efficiency transformation of tall fescue (Festuca arundinacea).
Journal of plant physiology.
2005 Jan; 162(1):103-13. doi:
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Journal of applied microbiology.
2005; 99(1):7-23. doi:
10.1111/j.1365-2672.2005.02595.x. [PMID: 15960661] - Z-Y Wang, J Bell, D Lehmann. Transgenic Russian wildrye (Psathyrostachys juncea) plants obtained by biolistic transformation of embryogenic suspension cells.
Plant cell reports.
2004 Jul; 22(12):903-9. doi:
10.1007/s00299-004-0772-4. [PMID: 15069579] - H Hisano, Y Kimoto, H Hayakawa, J Takeichi, T Domae, R Hashimoto, J Abe, S Asano, A Kanazawa, Y Shimamoto. High frequency Agrobacterium-mediated transformation and plant regeneration via direct shoot formation from leaf explants in Beta vulgaris and Beta maritima.
Plant cell reports.
2004 Jul; 22(12):910-8. doi:
10.1007/s00299-004-0773-3. [PMID: 15042407] - H Tsugawa, T Kagami, M Suzuki. High-frequency transformation of Lobelia erinus L. by Agrobacterium-mediated gene transfer.
Plant cell reports.
2004 May; 22(10):759-64. doi:
10.1007/s00299-004-0758-2. [PMID: 14770264] - A S Oreifig, G Kovács, B Jenes, E Kiss, P Scott, O Toldi. Development of a non-lethal selection system by using the aadA marker gene for efficient recovery of transgenic rice (Oryza sativa L.).
Plant cell reports.
2004 Feb; 22(7):490-6. doi:
10.1007/s00299-003-0715-5. [PMID: 15034748] - M-J Cho, H Yano, D Okamoto, H-K Kim, H-R Jung, K Newcomb, V K Le, H S Yoo, R Langham, B B Buchanan, P G Lemaux. Stable transformation of rice (Oryza sativa L.) via microprojectile bombardment of highly regenerative, green tissues derived from mature seed.
Plant cell reports.
2004 Feb; 22(7):483-9. doi:
10.1007/s00299-003-0713-7. [PMID: 14551731] - Anna Przetakiewicz, Agnieszka Karaś, Wacław Orczyk, Anna Nadolska-Orczyk. Agrobacterium-mediated transformation of polyploid cereals. The efficiency of selection and transgene expression in wheat.
Cellular & molecular biology letters.
2004; 9(4B):903-17. doi:
. [PMID: 15647806] - Ortrun Mittelsten Scheid, Karin Afsar, Jerzy Paszkowski. Formation of stable epialleles and their paramutation-like interaction in tetraploid Arabidopsis thaliana.
Nature genetics.
2003 Aug; 34(4):450-4. doi:
10.1038/ng1210. [PMID: 12847525] - Bing Tian Ma, Ling Xia Wang, Ping Li, Zhen Zhu, Kai Da Zhou. [Study on transgenic elite indica container line D297B containing foreign insect-resistant gene gna].
Shi yan sheng wu xue bao.
2003 Aug; 36(4):249-54. doi:
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Plant cell reports.
2003 Jun; 21(10):974-80. doi:
10.1007/s00299-003-0600-2. [PMID: 12835907] - C-H Liau, S-J You, V Prasad, H-H Hsiao, J-C Lu, N-S Yang, M-T Chan. Agrobacterium tumefaciens-mediated transformation of an Oncidium orchid.
Plant cell reports.
2003 Jun; 21(10):993-8. doi:
10.1007/s00299-003-0614-9. [PMID: 12835910] - Su-Juan You, Chia-Hui Liau, Hsiang-En Huang, Teng-Yung Feng, Venkatesh Prasad, Hsin-hao Hsiao, Jian-Cheng Lu, Ming-Tsair Chan. Sweet pepper ferredoxin-like protein ( pflp) gene as a novel selection marker for orchid transformation.
Planta.
2003 May; 217(1):60-5. doi:
10.1007/s00425-002-0970-7. [PMID: 12721849] - J Cao, E D Earle. Transgene expression in broccoli (Brassica oleracea var. italica) clones propagated in vitro via leaf explants.
Plant cell reports.
2003 Apr; 21(8):789-96. doi:
10.1007/s00299-003-0589-6. [PMID: 12789524] - P Lombari, E Ercolano, H El Alaoui, M Chiurazzi. A new transformation-regeneration procedure in the model legume Lotus japonicus: root explants as a source of large numbers of cells susceptible to Agrobacterium-mediated transformation.
Plant cell reports.
2003 Apr; 21(8):771-7. doi:
10.1007/s00299-003-0576-y. [PMID: 12789521] - V Mihálka, E Balázs, I Nagy. Binary transformation systems based on 'shooter' mutants of Agrobacterium tumefaciens: a simple, efficient and universal gene transfer technology that permits marker gene elimination.
Plant cell reports.
2003 Apr; 21(8):778-84. doi:
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