Chlorophyllide a (BioDeep_00000004855)

   


代谢物信息卡片


Chlorophyllide a

化学式: C35H34MgN4O5 (614.238)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(lipidsearch) 31.8%

分子结构信息

SMILES: CCC1=C(C)/C/2=C/c3c(C=C)c(C)c4/C=C\5/[C@@H](C)[C@H](CCC(=O)O)C(=N5)C5=c6c(c(C)/c(=C/C1=N2)/n6[Mg]n34)C(=O)[C@@H]5C(=O)OC
InChI: /q

描述信息

同义名列表

2 个代谢物同义名

Chlorophyllide a; Chlorophyllide



数据库引用编号

10 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

0 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 6 BFSP2, FABP1, FSD1, HID1, SRP54, TYRP1
Peripheral membrane protein 4 AP1S2, BFSP2, FDXR, HSD17B6
Endosome membrane 1 TYRP1
Endoplasmic reticulum membrane 1 PLN
Mitochondrion membrane 1 PLN
Nucleus 4 FABP1, FSD1, MET, SRP54
cytosol 6 AP1S2, COP1, FABP1, HID1, MB, SRP54
mitochondrial membrane 1 PLN
nuclear body 1 MET
centrosome 1 FSD1
nucleoplasm 4 COP1, FABP1, FAM20C, MET
Cell membrane 2 BFSP2, GPR132
Lipid-anchor 1 HID1
Cytoplasmic side 2 AP1S2, BFSP2
Cleavage furrow 1 FSD1
Early endosome membrane 1 HSD17B6
Multi-pass membrane protein 1 GPR132
Golgi apparatus membrane 2 FAM20C, HID1
cell cortex 1 BFSP2
cell surface 1 MET
Golgi apparatus 4 AP1S2, ATRN, FAM20C, HID1
Golgi membrane 2 AP1S2, FAM20C
lysosomal membrane 1 AP1S2
mitochondrial inner membrane 2 FDXR, FECH
postsynapse 1 MET
plasma membrane 4 ATRN, BFSP2, GPR132, MET
Membrane 6 C1QTNF3, COP1, GPR132, HID1, MET, PLN
extracellular exosome 6 ATRN, C1QTNF3, FABP1, FAM20C, HID1, MB
Lumenal side 1 HSD17B6
endoplasmic reticulum 4 FAM20C, HSD17B6, PLN, SRP54
extracellular space 3 ATRN, C1QTNF3, FAM20C
perinuclear region of cytoplasm 1 PLN
mitochondrion 4 FDXR, FECH, PCK2, PLN
protein-containing complex 2 COP1, FABP1
intracellular membrane-bounded organelle 2 AP1S2, HSD17B6
Microsome membrane 1 HSD17B6
Single-pass type I membrane protein 2 ATRN, TYRP1
Secreted 2 C1QTNF3, FAM20C
extracellular region 1 MET
Single-pass membrane protein 2 MET, PLN
[Isoform 2]: Secreted 1 ATRN
mitochondrial matrix 3 FDXR, FECH, PCK2
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 FSD1
Melanosome membrane 1 TYRP1
sarcoplasm 1 MB
Early endosome 1 AP1S2
Membrane, clathrin-coated pit 1 AP1S2
clathrin-coated pit 1 AP1S2
Single-pass type II membrane protein 1 FAM20C
Mitochondrion inner membrane 2 FDXR, FECH
Cytoplasm, cytoskeleton 1 BFSP2
microtubule 1 FSD1
collagen trimer 1 C1QTNF3
intracellular vesicle 1 TYRP1
sarcoplasmic reticulum 1 PLN
peroxisomal matrix 1 FABP1
intermediate filament 1 BFSP2
nuclear speck 2 COP1, SRP54
NLRP3 inflammasome complex 1 COP1
receptor complex 1 MET
cytoskeleton 1 BFSP2
Cytoplasm, cell cortex 1 BFSP2
[Isoform 3]: Secreted 1 ATRN
Endomembrane system 1 AP1S2
Cytoplasmic vesicle membrane 1 AP1S2
Melanosome 1 TYRP1
Nucleus speckle 1 SRP54
basal plasma membrane 1 MET
trans-Golgi network membrane 1 AP1S2
endoplasmic reticulum lumen 1 FAM20C
Sarcoplasmic reticulum membrane 1 PLN
AIM2 inflammasome complex 1 COP1
clathrin-coated endocytic vesicle membrane 1 TYRP1
cytoplasmic microtubule 1 HID1
[Isoform 1]: Cell membrane 1 ATRN
AP-type membrane coat adaptor complex 1 AP1S2
membrane coat 1 AP1S2
AP-1 adaptor complex 1 AP1S2
signal recognition particle 1 SRP54
signal recognition particle, endoplasmic reticulum targeting 1 SRP54
Golgi medial cisterna 1 HID1
Cytoplasm, sarcoplasm 1 MB
apical cortex 1 FABP1
Golgi trans cisterna 1 HID1
calcium ion-transporting ATPase complex 1 PLN
cytoplasmic side of Golgi membrane 1 HID1
IPAF inflammasome complex 1 COP1
protease inhibitor complex 1 COP1
Cul4A-RING E3 ubiquitin ligase complex 1 COP1


文献列表

  • Sanja M Milenkovic, Marcela E Bărbînţă-Pătraşcu, Gabriel Baranga, Dejan Z Markovic, Laura Tugulea. Comparative spectroscopic studies on liposomes containing chlorophyll a and chlorophyllide a. General physiology and biophysics. 2013 Dec; 32(4):559-67. doi: 10.4149/gpb_2013052. [PMID: 23940094]
  • Birgit Rengstl, Ulrike Oster, Anna Stengel, Jörg Nickelsen. An intermediate membrane subfraction in cyanobacteria is involved in an assembly network for Photosystem II biogenesis. The Journal of biological chemistry. 2011 Jun; 286(24):21944-51. doi: 10.1074/jbc.m111.237867. [PMID: 21531723]
  • Consolacion Y Ragasa, Maria Claribel Lapina, Jadz Jevz Lee, Emelina H Mandia, John A Rideout. Secondary metabolites from Tectona philippinensis. Natural product research. 2008 Jun; 22(9):820-4. doi: 10.1080/14786410701640551. [PMID: 18569722]
  • Sylvain Aubry, Jan Mani, Stefan Hörtensteiner. Stay-green protein, defective in Mendel's green cotyledon mutant, acts independent and upstream of pheophorbide a oxygenase in the chlorophyll catabolic pathway. Plant molecular biology. 2008 Jun; 67(3):243-56. doi: 10.1007/s11103-008-9314-8. [PMID: 18301989]
  • Yasuhito Sakuraba, Akihiro Yamasato, Ryouichi Tanaka, Ayumi Tanaka. Functional analysis of N-terminal domains of Arabidopsis chlorophyllide a oxygenase. Plant physiology and biochemistry : PPB. 2007 Oct; 45(10-11):740-9. doi: 10.1016/j.plaphy.2007.07.016. [PMID: 17884554]
  • Katrin Philippar, Tina Geis, Iryna Ilkavets, Ulrike Oster, Serena Schwenkert, Jörg Meurer, Jürgen Soll. Chloroplast biogenesis: the use of mutants to study the etioplast-chloroplast transition. Proceedings of the National Academy of Sciences of the United States of America. 2007 Jan; 104(2):678-83. doi: 10.1073/pnas.0610062104. [PMID: 17202255]
  • Toshiyuki Suzuki, Tadashi Kunieda, Fumiko Murai, Satoshi Morioka, Yuzo Shioi. Mg-dechelation activity in radish cotyledons with artificial and native substrates, Mg-chlorophyllin a and chlorophyllide a. Plant physiology and biochemistry : PPB. 2005 May; 43(5):459-64. doi: 10.1016/j.plaphy.2005.03.009. [PMID: 15890522]
  • Ching-Yun Hsu, Chi-Ming Yang, Chiao-Ming Chen, Pi-Yu Chao, Shene-Pin Hu. Effects of chlorophyll-related compounds on hydrogen peroxide induced DNA damage within human lymphocytes. Journal of agricultural and food chemistry. 2005 Apr; 53(7):2746-50. doi: 10.1021/jf048520r. [PMID: 15796620]
  • R Parham, C A Rebeiz. Chloroplast biogenesis 72: a [4-vinyl]chlorophyllide a reductase assay using divinyl chlorophyllide a as an exogenous substrate. Analytical biochemistry. 1995 Oct; 231(1):164-9. doi: 10.1006/abio.1995.1516. [PMID: 8678296]
  • F C Belanger, J X Duggan, C A Rebeiz. Chloroplast biogenesis. Identification of chlorophyllide a (E458f674) as a divinyl chlorophyllide a. The Journal of biological chemistry. 1982 May; 257(9):4849-58. doi: . [PMID: 7068665]