pimelic acid (BioDeep_00000405382)

Main id: BioDeep_00000001634

 

natural product PANOMIX_OTCML-2023 BioNovoGene_Lab2019


代谢物信息卡片


6-Carboxyhexanoate

化学式: C7H12O4 (160.0736)
中文名称: 庚二酸, 蒲桃酸
谱图信息: 最多检出来源 Homo sapiens(urine) 38.36%

分子结构信息

SMILES: C(CCC(=O)O)CCC(=O)O
InChI: InChI=1S/C7H12O4/c8-6(9)4-2-1-3-5-7(10)11/h1-5H2,(H,8,9)(H,10,11)

描述信息

An alpha,omega-dicarboxylic acid that is pentane with two carboxylic acid groups at positions C-1 and C-5.
Pimelic acid is the organic compound and its derivatives are involved in the biosynthesis of the amino acid called lysine.
Pimelic acid is the organic compound and its derivatives are involved in the biosynthesis of the amino acid called lysine.

同义名列表

8 个代谢物同义名

pimelic acid; Heptanedioic acid; FA 7:1;O2; 6-Carboxyhexanoate; 1,5-Pentanedicarboxylic acid; 1,7-Heptanedioic acid; Pimelate; Pimelic acid



数据库引用编号

47 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

25 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 8 AXIN2, CAT, EGFR, FASN, G6PD, MYH8, PIM2, TYR
Peripheral membrane protein 2 CYP1B1, G6PD
Endosome membrane 1 EGFR
Endoplasmic reticulum membrane 2 CYP1B1, EGFR
Nucleus 3 AXIN2, EGFR, PPARA
cytosol 6 AXIN2, CAT, FASN, G6PD, MYH8, SLC22A7
centrosome 1 AXIN2
nucleoplasm 2 CD2, PPARA
Cell membrane 7 ALPI, CD2, EGFR, GRID1, SLC13A3, SLC22A7, SLC3A1
ruffle membrane 1 EGFR
Early endosome membrane 1 EGFR
Multi-pass membrane protein 5 GRID1, SLC13A3, SLC22A6, SLC22A7, SLC22A8
cell junction 1 EGFR
cell surface 2 CD2, EGFR
glutamatergic synapse 2 EGFR, GRID1
Golgi apparatus 2 CD2, FASN
Golgi membrane 2 EGFR, INS
Cytoplasm, cytosol 1 G6PD
Lysosome 1 TYR
endosome 1 EGFR
plasma membrane 11 ALPI, AXIN2, CD2, EGFR, FASN, GRID1, SLC13A3, SLC22A6, SLC22A7, SLC22A8, SLC3A1
Membrane 9 CAT, CYP1B1, EGFR, FASN, G6PD, SLC13A3, SLC22A6, SLC22A7, SLC3A1
apical plasma membrane 4 EGFR, SLC22A7, SLC22A8, SLC3A1
basolateral plasma membrane 5 EGFR, SLC13A3, SLC22A6, SLC22A7, SLC22A8
caveola 1 SLC22A6
extracellular exosome 8 CAT, FASN, G6PD, GRID1, SLC13A3, SLC22A6, SLC22A8, SLC3A1
extracellular space 2 EGFR, INS
perinuclear region of cytoplasm 2 EGFR, TYR
mitochondrion 3 CAT, CYP1B1, GCDH
protein-containing complex 4 CAT, CD2, EGFR, SLC22A6
intracellular membrane-bounded organelle 4 CAT, CYP1B1, G6PD, TYR
Microsome membrane 1 CYP1B1
Single-pass type I membrane protein 3 CD2, EGFR, TYR
Secreted 1 INS
extracellular region 4 ALPI, CAT, CD2, INS
cytoplasmic side of plasma membrane 2 CD2, G6PD
Mitochondrion matrix 1 GCDH
mitochondrial matrix 2 CAT, GCDH
centriolar satellite 1 G6PD
nuclear membrane 1 EGFR
external side of plasma membrane 1 CD2
beta-catenin destruction complex 1 AXIN2
Melanosome membrane 1 TYR
cell-cell junction 1 CD2
Golgi-associated vesicle 1 TYR
Single-pass type II membrane protein 1 SLC3A1
postsynaptic membrane 1 GRID1
Apical cell membrane 2 SLC22A7, SLC3A1
Membrane raft 1 EGFR
focal adhesion 2 CAT, EGFR
GABA-ergic synapse 1 GRID1
Peroxisome 1 CAT
intracellular vesicle 1 EGFR
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
lateral plasma membrane 1 SLC22A8
Postsynaptic cell membrane 1 GRID1
sarcomere 1 MYH8
receptor complex 1 EGFR
chromatin 1 PPARA
brush border membrane 1 SLC3A1
Basolateral cell membrane 3 SLC22A6, SLC22A7, SLC22A8
Lipid-anchor, GPI-anchor 1 ALPI
myosin filament 1 MYH8
myosin II complex 1 MYH8
endosome lumen 1 INS
Melanosome 2 FASN, TYR
side of membrane 1 ALPI
basal plasma membrane 3 EGFR, SLC22A6, SLC22A7
synaptic membrane 1 EGFR
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 2 CAT, INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 1 INS
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
postsynaptic density membrane 1 GRID1
clathrin-coated endocytic vesicle membrane 1 EGFR
Basal cell membrane 1 SLC22A6
[Isoform 1]: Cytoplasm, cytosol 1 SLC22A7
multivesicular body, internal vesicle lumen 1 EGFR
Shc-EGFR complex 1 EGFR
catalase complex 1 CAT
muscle myosin complex 1 MYH8
vacuolar membrane 1 SLC3A1
glycogen granule 1 FASN
[Isoform 2]: Basolateral cell membrane 1 SLC22A7


文献列表

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