gibberellin A20 (BioDeep_00000003522)

 

Secondary id: BioDeep_00000228253

Plant Hormones natural product


代谢物信息卡片


(1R,2R,5S,8S,9S,10R,11R)-5-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylic acid

  化学式: C19H24O5 (332.1624)
中文名称: 赤霉素 A20, 赤霉素A20
  谱图信息: 最多检出来源 Viridiplantae(lipidsearch) 33.14%

分子结构信息

SMILES: C=C1CC23CC1(O)CCC2C12CCCC(C)(C(=O)O1)C2C3C(=O)O
InChI: InChI=1S/C19H24O5/c1-10-8-17-9-18(10,23)7-4-11(17)19-6-3-5-16(2,15(22)24-19)13(19)12(17)14(20)21/h11-13,23H,1,3-9H2,2H3,(H,20,21)/t11-,12-,13-,16?,17+,18+,19-/m1/s1


描述信息

A C19-gibberellin that is a pentacyclic diterpenoid responsible for promoting growth and development. Initially identified in Gibberella fujikuroi, it differs from gibberellin A1 in lacking an OH group at C-2 (gibbane numbering).

同义名列表

12 个代谢物同义名

gibberellin A20; Gibberellin 20; Gibberellin A20; (1R,2R,5S,8S,9S,10R,11R)-5-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo(9.3.2.1(5,8).0(1,10).0(2,8))heptadecane-9-carboxylic acid; (1R,2R,5S,8S,9S,10R,11R)-5-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo(9.3.2.15,8.01,10.02,8)heptadecane-9-carboxylic acid; (1R,2R,5S,8S,9S,10R,11R)-5-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1(5,8).0(1,10).0(2,8)]heptadecane-9-carboxylic acid; (1R,2R,5S,8S,9S,10R,11R)-5-Hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylic acid; (1R,2R,5S,8S,9S,10R)-5-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo(9.3.2.15,8.01,10.02,8)heptadecane-9-carboxylic acid; (1R,2R,5S,8S,9S,10R)-5-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylic acid; 7alpha-hydroxy-1beta-methyl-8-methylidene-13-oxo-4a,1alpha-epoxymethano-4aalpha,4bbeta-gibbane-10beta-carboxylic acid; GA20; Gibbane-1,10-dicarboxylic acid, 4a,7-dihydroxy-1-methyl-8-methylene-, 1,4a-lactone, (1alpha,4aalpha,4bbeta,10beta)-



数据库引用编号

20 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(2)

代谢反应

399 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(226)

INOH(0)

PlantCyc(173)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

165 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 8 ABI3, CAND1, CAT, EIF3M, HPGDS, ISYNA1, SGTA, TXN
Peripheral membrane protein 3 CYP1B1, HSD17B6, MBP
Endoplasmic reticulum membrane 4 ALG11, CYP1B1, HSP90B1, SLN
Nucleus 8 CAND1, HSP90B1, MBP, MYB, PDX1, PPARA, SGTA, TXN
cytosol 11 CAND1, CAT, EIF3M, HPGDS, HSP90B1, ISYNA1, MBP, MYB, PDX1, SGTA, TXN
nucleoplasm 6 CAND1, HPGDS, MYB, PDX1, PPARA, TXN
RNA polymerase II transcription regulator complex 1 MYB
Cell membrane 1 SCN4A
Cytoplasmic side 1 MBP
lamellipodium 1 ABI3
Early endosome membrane 1 HSD17B6
Multi-pass membrane protein 1 SCN4A
Synapse 1 MBP
cell surface 1 MBP
dendritic shaft 1 ABI3
glutamatergic synapse 2 ABI3, GHRL
Golgi apparatus 1 CAND1
neuronal cell body 1 MBP
postsynapse 1 GHRL
smooth endoplasmic reticulum 1 HSP90B1
Cytoplasm, cytosol 1 PDX1
plasma membrane 2 MBP, SCN4A
Membrane 10 ABI3, ALG11, CAND1, CAT, CYP1B1, HSP90B1, MYB, SCN4A, SGTA, SLN
axon 1 GHRL
extracellular exosome 5 CAND1, CAT, HSP90B1, MBP, TXN
Lumenal side 1 HSD17B6
endoplasmic reticulum 2 HSD17B6, HSP90B1
extracellular space 1 GHRL
perinuclear region of cytoplasm 1 HSP90B1
Schaffer collateral - CA1 synapse 1 GHRL
mitochondrion 4 CAT, CYP1B1, MTERF1, PDX1
protein-containing complex 4 CAT, EIF3M, HSP90B1, MBP
intracellular membrane-bounded organelle 4 CAT, CYP1B1, HPGDS, HSD17B6
Microsome membrane 2 CYP1B1, HSD17B6
postsynaptic density 1 ABI3
Secreted 2 GHRL, TXN
extracellular region 6 CAND1, CAT, GHRL, HSP90B1, MBP, TXN
Single-pass membrane protein 2 ALG11, SLN
mitochondrial matrix 3 CAT, MTERF1, PDX1
dendritic spine 1 ABI3
neuronal dense core vesicle lumen 1 GHRL
midbody 1 HSP90B1
focal adhesion 2 CAT, HSP90B1
mitochondrial nucleoid 1 MTERF1
Peroxisome 1 CAT
sarcoplasmic reticulum 1 SLN
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
collagen-containing extracellular matrix 2 HSP90B1, MBP
nuclear speck 1 PDX1
chromatin 2 PDX1, PPARA
cell periphery 1 MBP
[Isoform 3]: Nucleus 1 MBP
Melanosome 1 HSP90B1
myelin sheath 1 MBP
sperm plasma membrane 1 HSP90B1
ubiquitin ligase complex 1 CAND1
ficolin-1-rich granule lumen 3 CAND1, CAT, MBP
secretory granule lumen 3 CAND1, CAT, GHRL
endoplasmic reticulum lumen 2 GHRL, HSP90B1
nuclear matrix 1 MYB
eukaryotic 43S preinitiation complex 1 EIF3M
eukaryotic 48S preinitiation complex 1 EIF3M
eukaryotic translation initiation factor 3 complex 1 EIF3M
eukaryotic translation initiation factor 3 complex, eIF3m 1 EIF3M
pyruvate dehydrogenase complex 1 PDX1
transport vesicle 1 MBP
Sarcoplasmic reticulum membrane 1 SLN
Sarcoplasmic reticulum lumen 1 HSP90B1
TRC complex 1 SGTA
voltage-gated sodium channel complex 1 SCN4A
endocytic vesicle lumen 1 HSP90B1
compact myelin 1 MBP
internode region of axon 1 MBP
catalase complex 1 CAT
endoplasmic reticulum chaperone complex 1 HSP90B1
[Bone marrow proteoglycan]: Secreted 1 MBP
SCAR complex 1 ABI3
Myelin membrane 1 MBP
cullin-RING ubiquitin ligase complex 1 CAND1
actin-based cell projection 1 ABI3


文献列表