Blasticidin S (BioDeep_00001028330)

Main id: BioDeep_00000003361

 


代谢物信息卡片


(2S,3S,6R)-3-[[3-amino-5-[carbamimidoyl(methyl)amino]pentanoyl]amino]-6-(4-amino-2-oxopyrimidin-1-yl)-3,6-dihydro-2H-pyran-2-carboxylic acid

化学式: C17H26N8O5 (422.2026)
中文名称: 布拉叶斯
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: CN(CCC(CC(=O)NC1C=CC(OC1C(=O)O)N2C=CC(=NC2=O)N)N)C(=N)N
InChI: InChI=1S/C17H26N8O5/c1-24(16(20)21)6-4-9(18)8-12(26)22-10-2-3-13(30-14(10)15(27)28)25-7-5-11(19)23-17(25)29/h2-3,5,7,9-10,13-14H,4,6,8,18H2,1H3,(H3,20,21)(H,22,26)(H,27,28)(H2,19,23,29)/t9-,10-,13+,14-/m0/s1

描述信息

D000890 - Anti-Infective Agents > D000977 - Antiparasitic Agents > D000981 - Antiprotozoal Agents
A blasticidin that is an antibiotic obtained from Streptomyces griseochromogene.
D000890 - Anti-Infective Agents > D000900 - Anti-Bacterial Agents
D000890 - Anti-Infective Agents > D000935 - Antifungal Agents
D004791 - Enzyme Inhibitors

同义名列表

3 个代谢物同义名

Blasticidin S; (2S,3S,6R)-3-[[3-amino-5-[carbamimidoyl(methyl)amino]pentanoyl]amino]-6-(4-amino-2-oxopyrimidin-1-yl)-3,6-dihydro-2H-pyran-2-carboxylic acid; Blasticidin S



数据库引用编号

14 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

0 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 12 AICDA, APEH, CENPF, LRRC8A, LRRC8B, LRRC8C, LRRC8D, NES, RAB34, RAD51, TCIM, TUBB4B
Endoplasmic reticulum membrane 5 CD4, LRRC8B, LRRC8C, LRRC8D, RRBP1
Nucleus 6 AICDA, CENPF, RAB34, RAD51, TCIM, TUBB4B
cytosol 7 AICDA, APEH, CDA, CENPF, RAD51, TCIM, TUBB4B
phagocytic vesicle 1 RAB34
centrosome 3 CENPF, RAB34, RAD51
nucleoplasm 3 CENPF, RAD51, TCIM
Cell membrane 6 CD4, CD8A, LRRC8A, LRRC8B, LRRC8C, LRRC8D
Lipid-anchor 1 RAB34
Cytoplasmic side 1 RAB34
Multi-pass membrane protein 4 LRRC8A, LRRC8B, LRRC8C, LRRC8D
cell surface 1 LRRC8A
Golgi apparatus 1 RAB34
lysosomal membrane 1 LRRC8A
Cytoplasm, cytosol 1 AICDA
plasma membrane 7 CD4, CD8A, LRRC8A, LRRC8B, LRRC8C, LRRC8D, TCIM
Membrane 5 LRRC8A, LRRC8B, LRRC8C, LRRC8D, RRBP1
extracellular exosome 5 APEH, COL18A1, RAB34, SPINK1, TUBB4B
Lysosome membrane 1 LRRC8A
endoplasmic reticulum 1 RRBP1
extracellular space 1 COL18A1
perinuclear region of cytoplasm 3 CENPF, RAB34, RAD51
mitochondrion 1 RAD51
protein-containing complex 2 AICDA, RAD51
pronucleus 1 CENPF
Single-pass type I membrane protein 2 CD4, CD8A
Secreted 2 COL18A1, SPINK1
extracellular region 5 APEH, CD8A, CDA, COL18A1, TUBB4B
Single-pass membrane protein 1 RRBP1
[Isoform 2]: Secreted 1 CD8A
Mitochondrion matrix 1 RAD51
mitochondrial matrix 1 RAD51
Cell projection, cilium 1 RAB34
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 2 RAB34, RAD51
nuclear membrane 2 APEH, CENPF
external side of plasma membrane 2 CD4, CD8A
Extracellular vesicle 1 TUBB4B
Secreted, extracellular space, extracellular matrix 1 COL18A1
microtubule cytoskeleton 1 TUBB4B
nucleolus 3 RAB34, RAD51, TCIM
midbody 1 CENPF
P-body 1 AICDA
Early endosome 1 CD4
vesicle 1 RAB34
Membrane raft 1 CD4
Cytoplasm, cytoskeleton 1 TUBB4B
microtubule 1 TUBB4B
spindle 1 CENPF
basement membrane 1 COL18A1
collagen trimer 1 COL18A1
PML body 1 RAD51
collagen-containing extracellular matrix 1 COL18A1
intermediate filament 1 NES
axoneme 1 CENPF
nuclear speck 1 TCIM
receptor complex 1 CD8A
ciliary basal body 1 CENPF
cilium 1 RAB34
chromatin 2 CENPF, RAD51
Cytoplasmic vesicle, phagosome membrane 1 RAB34
phagocytic vesicle membrane 1 RAB34
mitotic spindle 1 TUBB4B
Chromosome 1 RAD51
cytoskeleton 1 TUBB4B
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome, centriole 1 RAB34
centriole 1 RAB34
Nucleus, nucleolus 2 RAB34, TCIM
spindle pole 1 CENPF
chromosome, telomeric region 1 RAD51
nuclear chromosome 1 RAD51
site of double-strand break 1 RAD51
intercellular bridge 1 TUBB4B
Cytoplasm, cytoskeleton, flagellum axoneme 1 TUBB4B
sperm flagellum 1 TUBB4B
nuclear envelope 1 CENPF
axonemal microtubule 1 TUBB4B
lateral element 1 RAD51
monoatomic ion channel complex 4 LRRC8A, LRRC8B, LRRC8C, LRRC8D
Nucleus speckle 1 TCIM
intermediate filament cytoskeleton 1 NES
Golgi stack 1 RAB34
plasma membrane raft 1 CD8A
ficolin-1-rich granule lumen 2 APEH, CDA
secretory granule lumen 1 CDA
endoplasmic reticulum lumen 2 CD4, COL18A1
nuclear matrix 1 CENPF
male germ cell nucleus 1 RAD51
tertiary granule lumen 1 CDA
kinetochore 1 CENPF
Single-pass type III membrane protein 1 RRBP1
azurophil granule lumen 1 TUBB4B
Golgi cisterna 1 RAB34
condensed nuclear chromosome 1 RAD51
chromosome, centromeric region 1 CENPF
outer kinetochore 1 CENPF
clathrin-coated endocytic vesicle membrane 1 CD4
[Isoform 1]: Cell membrane 1 CD8A
condensed chromosome 1 RAD51
Cytoplasmic vesicle, phagosome 1 RAB34
Secreted, extracellular space, extracellular matrix, basement membrane 1 COL18A1
ribosome 1 RRBP1
T cell receptor complex 2 CD4, CD8A
presynaptic intermediate filament cytoskeleton 1 RAD51
nuclear ubiquitin ligase complex 1 RAD51
[Non-collagenous domain 1]: Secreted, extracellular space, extracellular matrix, basement membrane 1 COL18A1
[Endostatin]: Secreted 1 COL18A1
ciliary transition fiber 1 CENPF


文献列表

  • Yixin Ge, Jae Hoon Lee, Baishi Hu, Youfu Zhao. Loss-of-Function Mutations in the Dpp and Opp Permeases Render Erwinia amylovora Resistant to Kasugamycin and Blasticidin S. Molecular plant-microbe interactions : MPMI. 2018 08; 31(8):823-832. doi: 10.1094/mpmi-01-18-0007-r. [PMID: 29474798]
  • Jack R Davison, Katheryn M Lohith, Xiaoning Wang, Kostyantyn Bobyk, Sivakoteswara R Mandadapu, Su-Lin Lee, Regina Cencic, Justin Nelson, Scott Simpkins, Karen M Frank, Jerry Pelletier, Chad L Myers, Jeff Piotrowski, Harold E Smith, Carole A Bewley. A New Natural Product Analog of Blasticidin S Reveals Cellular Uptake Facilitated by the NorA Multidrug Transporter. Antimicrobial agents and chemotherapy. 2017 06; 61(6):. doi: 10.1128/aac.02635-16. [PMID: 28373194]
  • Anthony L Shiver, Hendrik Osadnik, George Kritikos, Bo Li, Nevan Krogan, Athanasios Typas, Carol A Gross. A Chemical-Genomic Screen of Neglected Antibiotics Reveals Illicit Transport of Kasugamycin and Blasticidin S. PLoS genetics. 2016 06; 12(6):e1006124. doi: 10.1371/journal.pgen.1006124. [PMID: 27355376]
  • Shohei Sakuda, Tomoya Yoshinari, Tomohiro Furukawa, Usuma Jermnak, Keiko Takagi, Kurin Iimura, Toshiyoshi Yamamoto, Michio Suzuki, Hiromichi Nagasawa. Search for aflatoxin and trichothecene production inhibitors and analysis of their modes of action. Bioscience, biotechnology, and biochemistry. 2016; 80(1):43-54. doi: 10.1080/09168451.2015.1086261. [PMID: 26376763]
  • Clarissa C Lee, Elizaveta Freinkman, David M Sabatini, Hidde L Ploegh. The protein synthesis inhibitor blasticidin s enters mammalian cells via leucine-rich repeat-containing protein 8D. The Journal of biological chemistry. 2014 Jun; 289(24):17124-31. doi: 10.1074/jbc.m114.571257. [PMID: 24782309]
  • D Engelmeier, F Hadacek, O Hofer, G Lutz-Kutschera, M Nagl, G Wurz, H Greger. Antifungal 3-butylisocoumarins from Asteraceae-Anthemideae. Journal of natural products. 2004 Jan; 67(1):19-25. doi: 10.1021/np0301339. [PMID: 14738379]
  • Denny G Mellersh, Inge V Foulds, Verna J Higgins, Michele C Heath. H2O2 plays different roles in determining penetration failure in three diverse plant-fungal interactions. The Plant journal : for cell and molecular biology. 2002 Feb; 29(3):257-68. doi: 10.1046/j.0960-7412.2001.01215.x. [PMID: 11844104]
  • Makoto Kimura, Makio Furuichi, Masaki Yamamoto, Takashi Kumasaka, Hiroshi Mizuno, Masashi Miyano, Isamu Yamaguchi. The flexible C-terminal region of Aspergillus terreus blasticidin S deaminase: identification of its functional roles with deletion enzymes. Biochemical and biophysical research communications. 2002 Jan; 290(1):421-6. doi: 10.1006/bbrc.2001.6184. [PMID: 11779186]
  • D Engelmeier, F Hadacek, T Pacher, S Vajrodaya, H Greger. Cyclopenta[b]benzofurans from Aglaia species with pronounced antifungal activity against rice blast fungus (Pyricularia grisea). Journal of agricultural and food chemistry. 2000 Apr; 48(4):1400-4. doi: 10.1021/jf990509h. [PMID: 10775404]
  • K Tamura, M Kimura, I Yamaguchi. Blasticidin S deaminase gene (BSD): a new selection marker gene for transformation of Arabidopsis thaliana and Nicotiana tabacum. Bioscience, biotechnology, and biochemistry. 1995 Dec; 59(12):2336-8. doi: 10.1271/bbb.59.2336. [PMID: 8611760]
  • T Kitagawa, T Kawasaki, H Munechika. Enzyme immunoassay of blasticidin S with high sensitivity: a new and convenient method for preparation of immunogenic (hapten-protein) conjugates. Journal of biochemistry. 1982 Aug; 92(2):585-90. doi: 10.1093/oxfordjournals.jbchem.a133967. [PMID: 6752134]
  • K T HUANG, T MISATO, H ASUYAMA. EFFECT OF BLASTICIDIN S ON PROTEIN SYNTHESIS OF PIRICULARIA ORYZAE. The Journal of antibiotics. 1964 Mar; 17(?):65-70. doi: ". [PMID: 14157011]