GLYCERIC ACID (BioDeep_00000400458)

Main id: BioDeep_00000001330

 

natural product BioNovoGene_Lab2019


代谢物信息卡片


D-(+)-Glyceric acid hemicalcium salt

化学式: C3H6O4 (106.0266)
中文名称: DL-甘油酸, 甘油酸, 甘油酸酯
谱图信息: 最多检出来源 Homo sapiens(natural_products) 81.82%

分子结构信息

SMILES: C(C(C(=O)O)O)O
InChI: InChI=1S/C3H6O4/c4-1-2(5)3(6)7/h2,4-5H,1H2,(H,6,7)

描述信息

A trionic acid that consists of propionic acid substituted at positions 2 and 3 by hydroxy groups.

同义名列表

6 个代谢物同义名

DL-GLYCERIC ACID; GLYCERIC ACID; DL-Glyceric acid sol; D-(+)-Glyceric acid hemicalcium salt; D-Glycerate; Glyceric acid



数据库引用编号

22 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

71 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 10 ADH5, CAT, FRZB, GAPDH, GLYCTK, GRHPR, GSTM1, PCSK9, PLA2G12A, TGM3
Peripheral membrane protein 2 GNPAT, PRTN3
Nucleus 3 GAPDH, GCAT, IDH3A
cytosol 9 ADH5, CAT, GAPDH, GLYCTK, GNPAT, GRHPR, GSTM1, LIPE, PRTN3
mitochondrial membrane 1 GNPAT
nucleoplasm 1 GCAT
Cell membrane 3 KIAA0319, LIPE, PRTN3
Cytoplasmic granule 1 PRTN3
Early endosome membrane 1 KIAA0319
cell surface 1 PCSK9
glutamatergic synapse 1 PTPRD
Golgi apparatus 2 GLYCTK, PCSK9
Golgi membrane 1 INS
lysosomal membrane 1 PCSK9
mitochondrial inner membrane 1 GCAT
presynaptic membrane 1 PTPRD
Cytoplasm, cytosol 2 GAPDH, LIPE
Lysosome 1 PCSK9
endosome 1 PCSK9
plasma membrane 5 GAPDH, KIAA0319, PCSK9, PRTN3, PTPRD
Membrane 7 CAT, FRZB, GAPDH, GNPAT, KIAA0319, LIPE, PTPRD
caveola 1 LIPE
extracellular exosome 7 ADH5, CAT, GAPDH, GRHPR, PRTN3, PTPRD, TGM3
endoplasmic reticulum 1 PCSK9
extracellular space 6 FRZB, IL6, INS, PCSK9, PNLIP, PRTN3
perinuclear region of cytoplasm 2 GAPDH, PCSK9
Schaffer collateral - CA1 synapse 1 PTPRD
mitochondrion 6 ADH5, CAT, GCAT, GLYCTK, GRHPR, IDH3A
protein-containing complex 2 CAT, TGM3
intracellular membrane-bounded organelle 4 CAT, GAPDH, KIAA0319, PRTN3
Single-pass type I membrane protein 2 KIAA0319, PTPRD
Secreted 7 FRZB, IL6, INS, PCSK9, PLA2G12A, PNLIP, PRTN3
extracellular region 8 CAT, FRZB, IL6, INS, PCSK9, PLA2G12A, PNLIP, PRTN3
hippocampal mossy fiber to CA3 synapse 1 PTPRD
mitochondrial matrix 2 CAT, IDH3A
Extracellular side 1 PRTN3
nuclear membrane 1 GAPDH
cytoplasmic vesicle 1 KIAA0319
microtubule cytoskeleton 1 GAPDH
Early endosome 2 KIAA0319, PCSK9
COPII-coated ER to Golgi transport vesicle 1 PCSK9
vesicle 1 GAPDH
Cytoplasm, perinuclear region 1 GAPDH
Matrix side 1 GNPAT
Membrane raft 1 PRTN3
Cytoplasm, cytoskeleton 1 GAPDH
focal adhesion 1 CAT
Peroxisome 2 CAT, GNPAT
Peroxisome matrix 1 CAT
peroxisomal matrix 3 CAT, GNPAT, GRHPR
peroxisomal membrane 2 CAT, GNPAT
nuclear speck 1 GCAT
Late endosome 1 PCSK9
cytoskeleton 1 GAPDH
intercellular bridge 1 GSTM1
Endomembrane system 1 GNPAT
endosome lumen 1 INS
Lipid droplet 2 GAPDH, LIPE
Membrane, caveola 1 LIPE
Peroxisome membrane 1 GNPAT
[Isoform 1]: Cytoplasm 1 GLYCTK
plasma membrane raft 1 PRTN3
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 2 CAT, INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 3 IL6, INS, PCSK9
transport vesicle 1 INS
azurophil granule lumen 1 PRTN3
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
clathrin-coated endocytic vesicle membrane 1 KIAA0319
ribonucleoprotein complex 1 GAPDH
extrinsic component of cytoplasmic side of plasma membrane 1 TGM3
endolysosome membrane 1 PCSK9
isocitrate dehydrogenase complex (NAD+) 1 IDH3A
extrinsic component of external side of plasma membrane 1 PCSK9
GAIT complex 1 GAPDH
PCSK9-LDLR complex 1 PCSK9
catalase complex 1 CAT
catalytic complex 1 GRHPR
interleukin-6 receptor complex 1 IL6
PCSK9-AnxA2 complex 1 PCSK9


文献列表

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  • Jörn Oliver Sass, Sidney Behringer, Malkanthi Fernando, Elisabetta Cesaroni, Ida Cursio, Alberto Volpini, Claudia Till. d-Glycerate kinase deficiency in a neuropediatric patient. Brain & development. 2020 Feb; 42(2):226-230. doi: 10.1016/j.braindev.2019.11.008. [PMID: 31837836]
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