Methane (BioDeep_00000004689)
Secondary id: BioDeep_00001867664
human metabolite Endogenous blood metabolite
代谢物信息卡片
化学式: CH4 (16.0313)
中文名称: 甲烷, 甲烷-13C
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: C
InChI: InChI=1S/CH4/h1H4
描述信息
Methane (CH4), is a gas produced by a group of colonic anaerobes, absorbed from the colon and excreted in expired air. As a result, breath CH4 excretion can be used as an indicator of the in situ activity of the methanogenic flora. All CH4 produced in human beings is a metabolic product of intestinal bacteria, and about 50\\% of CH4 produced in the gut is absorbed and excreted in expired air. Because there appears to be no catabolism of this gas by other colonic organisms or host cells, breath CH4 measurements provide a rapid, simple means of semi quantitatively assessing the ongoing in situ metabolism of the methanogenic flora. It could seem likely that the intracolonic activity of a variety of bacteria similarly might be assessed quantitatively via analysis of expired air. However, the application of this methodology has been confounded by the rapid catabolism of many volatile bacterial products by other bacteria or human tissue. A striking aspect of the studies of breath CH4 measurements is the enormous individual variations in the excretion of this gas. Virtually all children under 5 years of age and 66\\% of the adult population do not exhale appreciable quantities of CH4. The remaining 34\\% of the adult population has appreciable breath methane concentrations of up to 80 ppm (mean, 15.2 ppm; median, 11.8 ppm). On this basis the population can be divided into CH4 producers or nonproducers, although a more accurate term would be to define subjects as being low or high CH4 producers. The primary methanogen present in the human colon, Methanobrevibacter smithii, produces methane via a reaction that relies entirely on H2 produced by other organisms to reduce CO2 to CH4. Thus, breath CH4 concentrations might be expected to mirror breath H2 concentrations; however, the high levels of CH4 observed in the fasting state may result from H2 derived from endogenous rather than dietary substrates. A diverse assortment of conditions has been associated with a high prevalence of methane producers including diverticulosis, cystic fibrosis, high fasting serum cholesterol levels, encopresis in children, and aorto-iliac vascular disease, whereas obesity (measured as skin-fold thickness) was related inversely to methane production. The challenge that remains is to determine to what extent methanogens actively influence body physiology vs. simply serve as passive indicators of colonic function. (PMID: 16469670, Clinical Gastroenterology and Hepatology Volume 4, Issue 2, February 2006, Pages 123-129). Methane can be found in Desulfovibrio, Methanobacterium, Methanobrevibacter, Methanococcus, Methanocorpusculum, Methanoculleus, Methanoflorens, Methanofollis, Methanogenium, Methanomicrobium, Methanopyrus, Methanoregula, Methanosaeta, Methanosarcina, Methanosphaera, Methanospirillium, Methanothermobacter (Wikipedia).
Methane (CH4), is a gas produced by a group of colonic anaerobes, absorbed from the colon and excreted in expired air. As a result, breath CH4 excretion can be used as an indicator of the in situ activity of the methanogenic flora. All CH4 produced in human beings is a metabolic product of intestinal bacteria, and about 50\\% of CH4 produced in the gut is absorbed and excreted in expired air. Because there appears to be no catabolism of this gas by other colonic organisms or host cells, breath CH4 measurements provide a rapid, simple means of semi quantitatively assessing the ongoing in situ metabolism of the methanogenic flora. It could seem likely that the intracolonic activity of a variety of bacteria similarly might be assessed quantitatively via analysis of expired air. However, the application of this methodology has been confounded by the rapid catabolism of many volatile bacterial products by other bacteria or human tissue. A striking aspect of the studies of breath CH4 measurements is the enormous individual variations in the excretion of this gas. Virtually all children under 5 years of age and 66\\% of the adult population do not exhale appreciable quantities of CH4. The remaining 34\\% of the adult population has appreciable breath methane concentrations of up to 80 ppm (mean, 15.2 ppm; median, 11.8 ppm). On this basis the population can be divided into CH4 producers or nonproducers, although a more accurate term would be to define subjects as being low or high CH4 producers. The primary methanogen present in the human colon, Methanobrevibacter smithii, produces methane via a reaction that relies entirely on H2 produced by other organisms to reduce CO2 to CH4. Thus, breath CH4 concentrations might be expected to mirror breath H2 concentrations; however, the high levels of CH4 observed in the fasting state may result from H2 derived from endogenous rather than dietary substrates. A diverse assortment of conditions has been associated with a high prevalence of methane producers including diverticulosis, cystic fibrosis, high fasting serum cholesterol levels, encopresis in children, and aorto-iliac vascular disease, whereas obesity (measured as skin-fold thickness) was related inversely to methane production. The challenge that remains is to determine to what extent methanogens actively influence body physiology vs. simply serve as passive indicators of colonic function. (PMID: 16469670, Clinical Gastroenterology and Hepatology Volume 4, Issue 2, February 2006, Pages 123-129) [HMDB]
同义名列表
93 个代谢物同义名
Methane in gaseus STate; Electrographite; Methyl hydride; (11c)methane; Thermatomic; Acticarbone; Kohlenstoff; Methylidyne; Hydrodarco; carbane-13; Filtrasorb; Anthrasorb; Kosmotherm; Thermblack; Carbosieve; Watercarb; Excelsior; Marsh gas; Humenegro; Methylene; Fire dAMP; Schungite; Carbonium; Collocarb; Conductex; Lampblack; Philblack; Sevacarb; Adsorbit; Canesorb; Kosmobil; Shungite; Tinolite; Flamruss; Atlantic; Carbomet; Kosmolak; Farbruss; Continex; Pelletex; Carbolac; Cecarbon; Plumbago; Kosmovar; Micronex; Carbodis; Arotone; Magecol; Grafoil; Korobon; Thermax; Molacco; Modulex; Printex; Aquadag; Rebonex; Grosafe; Spheron; Superba; Croflex; Carbone; Carbono; Aroflow; Cancarb; Kosmink; methane; Degussa; Carbene; Metanex; Nuchar; Papyex; Kosmos; Furnex; Arovel; Neotex; Crolac; Arogen; Furnal; Canlub; Metano; Biogas; Elftex; Methan; Statex; Gastex; Fecto; Huber; Arrow; Essex; Darco; R 50; CH4; Methane
数据库引用编号
23 个数据库交叉引用编号
- ChEBI: CHEBI:16183
- KEGG: C01438
- PubChem: 297
- HMDB: HMDB0002714
- DrugBank: DB09278
- ChEMBL: CHEMBL2106049
- ChEMBL: CHEMBL17564
- Wikipedia: Methane
- MetaCyc: CH4
- foodb: FDB023051
- chemspider: 291
- CAS: 150036-83-2
- CAS: 14493-06-2
- CAS: 6532-48-5
- CAS: 8006-14-2
- CAS: 74-82-8
- PMhub: MS000017245
- PubChem: 4618
- PDB-CCD: 74C
- 3DMET: B01450
- NIKKAJI: J2.380I
- RefMet: Methane
- KNApSAcK: 16183
分类词条
相关代谢途径
Reactome(0)
BioCyc(7)
PlantCyc(0)
代谢反应
17 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(15)
- superpathway of C1 compounds oxidation to CO2:
MeOH + an oxidized cytochrome cL ⟶ H+ + a reduced cytochrome cL + formaldehyde
- nitrite-dependent anaerobic methane oxidation:
H+ + NAD(P)H + O2 + methane ⟶ H2O + MeOH + NAD(P)+
- methane oxidation to methanol II:
O2 + an electron-transfer quinol + methane ⟶ H2O + MeOH + an electron-transfer quinone
- methane oxidation to methanol I:
H+ + NAD(P)H + O2 + methane ⟶ H2O + MeOH + NAD(P)+
- superpathway of C1 compounds oxidation to CO2:
S-formylglutathione + H2O ⟶ H+ + formate + glutathione
- methane oxidation to methanol I:
H+ + NAD(P)H + O2 + methane ⟶ H2O + NAD(P)+ + methanol
- superpathway of C1 compounds oxidation to CO2:
H2O + an oxidized amicyanin + methylamine ⟶ a reduced amicyanin + ammonia + formaldehyde
- methane oxidation to methanol I:
H+ + NAD(P)H + O2 + methane ⟶ H2O + NAD(P)+ + methanol
- methylphosphonate degradation I:
(methyl)phosphonate + ATP ⟶ α-D-ribose-1-(methyl)phosphonate-5-triphosphate + adenine
- methylphosphonate degradation II:
(methyl)phosphonate + ATP ⟶ α-D-ribose-1-(methyl)phosphonate-5-triphosphate + adenine
- methyl-coenzyme M reduction to methane:
coenzyme B + methyl-CoM ⟶ CoB-CoM heterodisulfide + methane
- methylphosphonate degradation I:
(methyl)phosphonate + ATP ⟶ α-D-ribose-1-(methyl)phosphonate-5-triphosphate + adenine
- methyl-coenzyme M reduction to methane:
coenzyme B + methyl-CoM ⟶ CoB-CoM heterodisulfide + methane
- methylphosphonate degradation I:
ATP + methylphosphonate ⟶ α-D-ribose-1-methylphosphonate-5-triphosphate + adenine
- methyl-coenzyme M reduction to methane:
coenzyme B + methyl-CoM ⟶ CoB-CoM heterodisulfide + methane
WikiPathways(0)
Plant Reactome(0)
INOH(0)
COVID-19 Disease Map(0)
PathBank(1)
- Methylphosphonate Degradation I:
Adenosine triphosphate + Methylphosphonate ⟶ -D-Ribose 1-methylphosphonate 5-triphosphate + Adenine
PharmGKB(0)
22 个相关的物种来源信息
- 5052 - Aspergillus: 10.1021/ACS.JNATPROD.5B00614
- 178537 - Callyspongia:
- 41994 - Ceratozamia mexicana: 10.1271/BBB1961.51.1719
- 171012 - Cycas media: 10.1271/BBB1961.51.1719
- 3396 - Cycas revoluta:
- 944497 - Datura discolor: 10.1039/JR9650004936
- 4075 - Datura inoxia: 10.1039/JR9650004936
- 115877 - Dioon spinulosum: 10.1271/BBB1961.51.1719
- 56525 - Dittrichia viscosa: 10.1016/0031-9422(85)80041-8
- 434652 - Elephantopus elatus: 10.1021/JA00967A056
- 2056227 - Eumaeus atala: 10.1016/S0031-9422(00)81161-9
- 9606 - Homo sapiens: -
- 114456 - Macrozamia communis: 10.1271/BBB1961.51.1719
- 520102 - Macrozamia riedlei: 10.1271/BBB1961.51.1719
- 33117 - Mandragora officinarum: 10.1016/J.PHYTOCHEM.2005.07.016
- 928738 - Mandragora turcomanica: 10.1016/J.PHYTOCHEM.2005.07.016
- 68563 - Petrosia:
- 2737399 - Petrosia durissima: 10.1021/NP0002583
- 68564 - Petrosia ficiformis: 10.1021/NP970424F
- 34343 - Stangeria eriopus: 10.1016/0378-8741(94)90005-1
- 42329 - Zamia furfuracea: 10.1016/S0031-9422(00)81161-9
- 3305 - Zamia integrifolia: 10.1016/S0031-9422(00)81161-9
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:
- PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。
文献列表
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Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association.
2018 Nov; 121(?):65-71. doi:
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Clinical toxicology (Philadelphia, Pa.).
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Iranian journal of basic medical sciences.
2017 Jan; 20(1):46-52. doi:
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2015 Sep; 29(6):1275-82. doi:
10.1016/j.tiv.2014.10.022
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Toxicology and applied pharmacology.
2015 Mar; 283(3):210-22. doi:
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Toxicology.
2010 Jun; 272(1-3):11-6. doi:
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Journal of biochemical and molecular toxicology.
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