10-Hydroxydecanoic acid (BioDeep_00000001276)

 

Secondary id: BioDeep_00000406073

human metabolite PANOMIX_OTCML-2023 blood metabolite BioNovoGene_Lab2019 natural product


代谢物信息卡片


10-hydroxy-decanoic acid

化学式: C10H20O3 (188.1412)
中文名称: 10-羟基癸酸, 10羟基癸酸
谱图信息: 最多检出来源 Homo sapiens(blood) 17.12%

Reviewed

Last reviewed on 2024-07-04.

Cite this Page

10-Hydroxydecanoic acid. BioDeep Database v3. PANOMIX ltd, a top metabolomics service provider from China. https://query.biodeep.cn/s/10-hydroxydecanoic_acid (retrieved 2024-12-23) (BioDeep RN: BioDeep_00000001276). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

分子结构信息

SMILES: C(CCCCC(=O)O)CCCCO
InChI: InChI=1S/C10H20O3/c11-9-7-5-3-1-2-4-6-8-10(12)13/h11H,1-9H2,(H,12,13)

描述信息

10-hydroxycapric acid is a 10-carbon, omega-hydroxy fatty acid, shown to be the preferred hydroxylation product (together with the 9-OH isomer) of capric acid in biosystems, and used as a standard in lipid assays; reported to have cytotoxic effects. It is a straight-chain saturated fatty acid and an omega-hydroxy-medium-chain fatty acid. It is functionally related to a decanoic acid. It is a conjugate acid of a 10-hydroxycaprate.

10-Hydroxydecanoic acid, also known as 10-OH-capric acid or 10-OH-caprate, belongs to the class of organic compounds known as medium-chain hydroxy acids and derivatives. These are hydroxy acids with a 6 to 12 carbon atoms long side chain. Based on a literature review a significant number of articles have been published on 10-Hydroxydecanoic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). 10-hydroxydecanoic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 10-Hydroxydecanoic acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
10-Hydroxydecanoic acid (NSC 15139) is a saturated fatty acid of 10-hydroxy-trans-2-decenoic acid from royal jelly, with anti-inflammatory activity[1].

同义名列表

16 个代谢物同义名

10-hydroxy-decanoic acid; 10-Hydroxydecanoic acid; 10-hydroxy capric acid; 10-OH-Decanoic acid; 10-Hydroxydecanoate; 10-Hydroxy caprate; 10-Hydroxycaprate; 10-OH-Capric acid; 10-OH-Decanoate; 10-OH-Caprate; 10-HDAA CPD; 10HDA CPD; 10-Hydroxydecanoate; NSC 15139; 10-Hydroxydecanoic acid; 10-Hydroxydecanoic acid



数据库引用编号

22 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

9 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 9 BDNF, EIF4EBP1, IRF1, NLRP3, NR5A2, PTGS2, STAT1, STAT2, TRIM63
Peripheral membrane protein 3 ACHE, CYP1B1, PTGS2
Endoplasmic reticulum membrane 2 CYP1B1, PTGS2
Nucleus 8 ACHE, EIF4EBP1, IRF1, NLRP3, NR5A2, STAT1, STAT2, TRIM63
cytosol 6 EIF4EBP1, IRF1, NLRP3, STAT1, STAT2, TNFRSF11A
dendrite 2 BDNF, STAT1
nucleoplasm 4 IRF1, NR5A2, STAT1, STAT2
RNA polymerase II transcription regulator complex 3 NR5A2, STAT1, STAT2
Cell membrane 4 ACHE, TNF, TRPA1, TRPV1
Multi-pass membrane protein 2 TRPA1, TRPV1
Golgi apparatus membrane 1 NLRP3
Synapse 1 ACHE
cell surface 2 ACHE, TNF
Golgi apparatus 2 ACHE, ATRN
Golgi membrane 2 INS, NLRP3
neuromuscular junction 1 ACHE
neuronal cell body 2 TNF, TRPV1
synaptic vesicle 1 BDNF
Cytoplasm, cytosol 1 NLRP3
plasma membrane 9 ACHE, ATRN, IFNLR1, STAT2, TNF, TNFRSF11A, TREM2, TRPA1, TRPV1
Membrane 8 ACHE, BDNF, CYP1B1, IFNLR1, NLRP3, TREM2, TRPA1, TRPV1
axon 2 BDNF, STAT1
caveola 1 PTGS2
extracellular exosome 1 ATRN
endoplasmic reticulum 2 NLRP3, PTGS2
extracellular space 6 ACHE, ATRN, BDNF, IL10, INS, TNF
perinuclear region of cytoplasm 3 ACHE, BDNF, STAT1
mitochondrion 2 CYP1B1, NLRP3
protein-containing complex 2 PTGS2, STAT1
intracellular membrane-bounded organelle 1 CYP1B1
Microsome membrane 2 CYP1B1, PTGS2
Single-pass type I membrane protein 4 ATRN, IFNLR1, TNFRSF11A, TREM2
Secreted 5 ACHE, BDNF, IL10, INS, NLRP3
extracellular region 7 ACHE, BDNF, IL10, INS, NLRP3, TNF, TREM2
[Isoform 2]: Secreted 2 ATRN, TREM2
Extracellular side 1 ACHE
external side of plasma membrane 3 TNF, TNFRSF11A, TRPV1
Z disc 1 TRIM63
nucleolus 1 STAT1
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
postsynaptic membrane 1 TRPV1
Membrane raft 2 TNF, TNFRSF11A
microtubule 1 TRIM63
GABA-ergic synapse 1 TRPV1
basement membrane 1 ACHE
Cytoplasm, cytoskeleton, microtubule organizing center 1 NLRP3
Inflammasome 1 NLRP3
interphase microtubule organizing center 1 NLRP3
NLRP3 inflammasome complex 1 NLRP3
Nucleus inner membrane 1 PTGS2
Nucleus outer membrane 1 PTGS2
nuclear inner membrane 1 PTGS2
nuclear outer membrane 1 PTGS2
Postsynaptic cell membrane 1 TRPV1
Cell projection, neuron projection 1 TRPV1
neuron projection 1 PTGS2
chromatin 4 IRF1, NR5A2, STAT1, STAT2
stereocilium bundle 1 TRPA1
phagocytic cup 1 TNF
Lipid-anchor, GPI-anchor 1 ACHE
[Isoform 3]: Secreted 2 ATRN, TREM2
Endomembrane system 1 NLRP3
endosome lumen 1 INS
M band 1 TRIM63
microtubule organizing center 1 NLRP3
side of membrane 1 ACHE
plasma membrane raft 1 TREM2
secretory granule lumen 1 INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 3 BDNF, INS, PTGS2
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
semaphorin receptor complex 1 TREM2
synaptic cleft 1 ACHE
[Isoform 1]: Cell membrane 3 ATRN, TNFRSF11A, TREM2
Cell projection, dendritic spine membrane 1 TRPV1
dendritic spine membrane 1 TRPV1
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
[Isoform H]: Cell membrane 1 ACHE
[Neurotrophic factor BDNF precursor form]: Secreted 1 BDNF
ISGF3 complex 2 STAT1, STAT2
interleukin-28 receptor complex 1 IFNLR1
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF
[Isoform RANK-e5a]: Cell membrane 1 TNFRSF11A


文献列表

  • Carine Jacques, Emilien L Jamin, Isabelle Jouanin, Cécile Canlet, Marie Tremblay-Franco, Jean-François Martin, Daniel Zalko, Yves Brunel, Sandrine Bessou-Touya, Laurent Debrauwer, Pierre-Jacques Ferret, Hélène Duplan. Safety assessment of cosmetics by read across applied to metabolomics data of in vitro skin and liver models. Archives of toxicology. 2021 10; 95(10):3303-3322. doi: 10.1007/s00204-021-03136-7. [PMID: 34459931]
  • Takafumi Toyohara, Takehiro Suzuki, Yasutoshi Akiyama, Daisuke Yoshihara, Yoichi Takeuchi, Eikan Mishima, Koichi Kikuchi, Chitose Suzuki, Masayuki Tanemoto, Sadayoshi Ito, Shizuko Nagao, Tomoyoshi Soga, Takaaki Abe. Metabolomic profiling of the autosomal dominant polycystic kidney disease rat model. Clinical and experimental nephrology. 2011 Oct; 15(5):676-687. doi: 10.1007/s10157-011-0467-4. [PMID: 21695416]
  • Yuko Terada, Masataka Narukawa, Tatsuo Watanabe. Specific hydroxy fatty acids in royal jelly activate TRPA1. Journal of agricultural and food chemistry. 2011 Mar; 59(6):2627-35. doi: 10.1021/jf1041646. [PMID: 21348496]
  • Juyoung Kim, Youngae Kim, Hyejeong Yun, Hyemin Park, Sun Yeou Kim, Kwang-Gill Lee, Sang-Mi Han, Yunhi Cho. Royal jelly enhances migration of human dermal fibroblasts and alters the levels of cholesterol and sphinganine in an in vitro wound healing model. Nutrition research and practice. 2010 Oct; 4(5):362-8. doi: 10.4162/nrp.2010.4.5.362. [PMID: 21103081]
  • Asmaa El Hamidi, Alexey Novikov, Doris Karibian, Malcolm B Perry, Martine Caroff. Structural characterization of Bordetella parapertussis lipid A. Journal of lipid research. 2009 May; 50(5):854-9. doi: 10.1194/jlr.m800454-jlr200. [PMID: 19017615]