1-[4-Hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione (BioDeep_00000782917)

   


代谢物信息卡片


2,4(1H,3H)-Pyrimidinedione,1-(2-deoxy-b-D-threo-pentofuranosyl)-5-methyl-

化学式: C10H14N2O5 (242.0903)
中文名称: 1-((2R,4R,5R)-4-羟基-5-(羟甲基)四氢呋喃-2-基)-5-甲基嘧啶-2,4(1H,3H)-二酮
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: CC1=CN(C(=O)NC1=O)C2CC(C(O2)CO)O
InChI: InChI=1S/C10H14N2O5/c1-5-3-12(10(16)11-9(5)15)8-2-6(14)7(4-13)17-8/h3,6-8,13-14H,2,4H2,1H3,(H,11,15,16)

描述信息

1-(2-Deoxy-β-D-threo-pentofuranosyl)thymine is a thymidine analog. Analogs of this series have insertional activity towards replicated DNA. They can be used to label cells and track DNA synthesis[1].

同义名列表

3 个代谢物同义名

2,4(1H,3H)-Pyrimidinedione,1-(2-deoxy-b-D-threo-pentofuranosyl)-5-methyl-; 1-[4-Hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione; 1-(2-Deoxy-β-D-threo-pentofuranosyl)thymine



数据库引用编号

5 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

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PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

6 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 12 ANXA5, AR, CHL1, DCK, DTYMK, EGFR, FOLH1, MTOR, NES, POLB, SLC5A5, TNK1
Peripheral membrane protein 3 ANXA5, MTOR, TNK1
Endosome membrane 1 EGFR
Endoplasmic reticulum membrane 2 EGFR, MTOR
Nucleus 13 AR, CA9, CHL1, DCK, DTYMK, EGFR, MET, MKI67, MTOR, PCNA, POLB, SLC5A5, TK1
cytosol 6 ANXA5, AR, DCK, DTYMK, MTOR, TK1
dendrite 2 CHL1, MTOR
nuclear body 3 MET, MKI67, PCNA
phagocytic vesicle 1 MTOR
centrosome 2 CHL1, PCNA
nucleoplasm 9 AR, CHL1, DCK, MET, MKI67, MS4A1, MTOR, PCNA, POLB
Cell membrane 6 CA9, CHL1, EGFR, FOLH1, MS4A1, SLC5A5
Lipid-anchor 1 MS4A1
Cytoplasmic side 1 MTOR
ruffle membrane 1 EGFR
Early endosome membrane 1 EGFR
Multi-pass membrane protein 2 MS4A1, SLC5A5
Golgi apparatus membrane 1 MTOR
cell junction 1 EGFR
cell surface 4 EGFR, FOLH1, MET, MS4A1
glutamatergic synapse 1 EGFR
Golgi membrane 2 EGFR, MTOR
lysosomal membrane 1 MTOR
postsynapse 1 MET
sarcolemma 1 ANXA5
Lysosome 1 MTOR
endosome 1 EGFR
plasma membrane 10 AR, CA9, CHL1, EGFR, F2, FOLH1, MET, MS4A1, SLC5A5, TNK1
Membrane 12 ANXA5, AR, CA9, CHL1, EGFR, FOLH1, MET, MKI67, MS4A1, MTOR, SLC5A5, TNK1
apical plasma membrane 1 EGFR
basolateral plasma membrane 2 CA9, EGFR
extracellular exosome 8 ANXA5, CHL1, F2, FOLH1, MS4A1, PCNA, SLC5A5, SPINK1
Lysosome membrane 1 MTOR
extracellular space 3 EGFR, F2, MS4A1
perinuclear region of cytoplasm 1 EGFR
mitochondrion 2 DCK, DTYMK
protein-containing complex 3 AR, EGFR, POLB
Microsome membrane 1 MTOR
TORC1 complex 1 MTOR
TORC2 complex 1 MTOR
Single-pass type I membrane protein 3 CA9, CHL1, EGFR
Secreted 2 F2, SPINK1
extracellular region 3 ANXA5, F2, MET
Mitochondrion outer membrane 1 MTOR
Single-pass membrane protein 2 CHL1, MET
mitochondrial outer membrane 1 MTOR
mitochondrial matrix 1 DTYMK
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 CHL1
nuclear membrane 1 EGFR
external side of plasma membrane 2 ANXA5, MS4A1
Extracellular vesicle 1 SLC5A5
nucleolus 3 CA9, CHL1, MKI67
midbody 1 CHL1
apical part of cell 1 CHL1
Single-pass type II membrane protein 1 FOLH1
Membrane raft 1 EGFR
focal adhesion 2 ANXA5, EGFR
microtubule 1 POLB
intracellular vesicle 1 EGFR
Nucleus, PML body 1 MTOR
PML body 1 MTOR
collagen-containing extracellular matrix 2 ANXA5, F2
intermediate filament 1 NES
nuclear speck 1 AR
receptor complex 2 EGFR, MET
Zymogen granule membrane 1 ANXA5
chromatin 3 AR, CHL1, PCNA
Chromosome 2 CHL1, MKI67
Nucleus, nucleolus 3 CA9, CHL1, MKI67
spindle pole 1 CHL1
nuclear replication fork 1 PCNA
chromosome, telomeric region 1 PCNA
blood microparticle 1 F2
Cell projection, microvillus membrane 1 CA9
microvillus membrane 1 CA9
Cytoplasm, cytoskeleton, spindle pole 1 CHL1
nuclear envelope 1 MTOR
Endomembrane system 1 MTOR
replication fork 1 PCNA
intermediate filament cytoskeleton 1 NES
basal plasma membrane 2 EGFR, MET
synaptic membrane 1 EGFR
plasma membrane raft 1 MS4A1
Golgi lumen 1 F2
endoplasmic reticulum lumen 1 F2
male germ cell nucleus 1 PCNA
[Processed neural cell adhesion molecule L1-like protein]: Secreted, extracellular space, extracellular matrix 1 CHL1
vesicle membrane 1 ANXA5
nuclear lamina 1 PCNA
clathrin-coated endocytic vesicle membrane 1 EGFR
spindle microtubule 1 POLB
Cytoplasmic vesicle, phagosome 1 MTOR
cyclin-dependent protein kinase holoenzyme complex 1 PCNA
multivesicular body, internal vesicle lumen 1 EGFR
Shc-EGFR complex 1 EGFR
endothelial microparticle 1 ANXA5
PCNA complex 1 PCNA
PCNA-p21 complex 1 PCNA
replisome 1 PCNA
[Isoform PSMA']: Cytoplasm 1 FOLH1


文献列表

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