FA 7:2;O5 (BioDeep_00000629073)

Main id: BioDeep_00000005584

 


代谢物信息卡片


(2R,3S)-2-hydroxybutane-1,2,3-tricarboxylic acid;3-C-carboxy-2,4-dideoxy-2-methyl-D-threo-pentaric acid

化学式: C7H10O7 (206.0427)
中文名称:
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C(C(O)=O)[C@H](C(O)=O)[C@@](O)(C(O)=O)C
InChI: InChI=1S/C7H10O7/c1-3(5(10)11)7(14,6(12)13)2-4(8)9/h3,14H,2H2,1H3,(H,8,9)(H,10,11)(H,12,13)/t3-,7-/m1/s1



数据库引用编号

13 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 8 ACLY, AXIN2, EGFR, FGF21, G6PD, GDF15, SLC9A1, TYR
Peripheral membrane protein 1 G6PD
Endosome membrane 1 EGFR
Endoplasmic reticulum membrane 2 EGFR, LNPK
Nucleus 4 AXIN2, CS, EGFR, GDF15
cytosol 6 ACLY, AXIN2, G6PD, GLS, PCCA, PCCB
centrosome 1 AXIN2
nucleoplasm 3 ACLY, LNPK, SLC9A1
Cell membrane 3 CLEC4D, EGFR, SLC9A1
Cytoplasmic side 1 LNPK
lamellipodium 1 SLC9A1
ruffle membrane 1 EGFR
Early endosome membrane 1 EGFR
Multi-pass membrane protein 2 LNPK, SLC9A1
Synapse 1 GLS
cell junction 1 EGFR
cell surface 3 EGFR, EPO, SLC9A1
glutamatergic synapse 1 EGFR
Golgi apparatus 1 GDF15
Golgi membrane 1 EGFR
Cytoplasm, cytosol 3 ACLY, G6PD, GLS
Lysosome 1 TYR
endosome 1 EGFR
plasma membrane 4 AXIN2, CLEC4D, EGFR, SLC9A1
Membrane 7 ACLY, CLEC4D, CS, EGFR, G6PD, LNPK, SLC9A1
apical plasma membrane 2 EGFR, SLC9A1
basolateral plasma membrane 2 EGFR, SLC9A1
extracellular exosome 6 ACLY, CS, EPO, G6PD, GDF15, SLC9A1
endoplasmic reticulum 1 LNPK
extracellular space 4 EGFR, EPO, FGF21, GDF15
perinuclear region of cytoplasm 3 EGFR, SLC9A1, TYR
intercalated disc 1 SLC9A1
mitochondrion 5 CS, GLS, PCCA, PCCB, SLC9A1
protein-containing complex 1 EGFR
intracellular membrane-bounded organelle 2 G6PD, TYR
Single-pass type I membrane protein 2 EGFR, TYR
Secreted 3 EPO, FGF21, GDF15
extracellular region 5 ACLY, ELN, EPO, FGF21, GDF15
cytoplasmic side of plasma membrane 1 G6PD
Mitochondrion matrix 3 CS, PCCA, PCCB
mitochondrial matrix 4 CS, GLS, PCCA, PCCB
centriolar satellite 1 G6PD
nuclear membrane 1 EGFR
external side of plasma membrane 1 CLEC4D
Secreted, extracellular space, extracellular matrix 1 ELN
T-tubule 1 SLC9A1
beta-catenin destruction complex 1 AXIN2
Melanosome membrane 1 TYR
Golgi-associated vesicle 1 TYR
Single-pass type II membrane protein 1 CLEC4D
Membrane raft 2 EGFR, SLC9A1
focal adhesion 2 EGFR, SLC9A1
extracellular matrix 1 ELN
intracellular vesicle 1 EGFR
collagen-containing extracellular matrix 1 ELN
receptor complex 1 EGFR
[Isoform 1]: Mitochondrion 1 GLS
Basolateral cell membrane 1 SLC9A1
specific granule membrane 1 CLEC4D
tertiary granule membrane 1 CLEC4D
Melanosome 1 TYR
cell body 1 EPO
basal plasma membrane 1 EGFR
synaptic membrane 1 EGFR
ficolin-1-rich granule lumen 1 ACLY
secretory granule lumen 1 EPO
azurophil granule lumen 1 ACLY
clathrin-coated endocytic vesicle membrane 1 EGFR
ficolin-1-rich granule membrane 1 CLEC4D
[Isoform 3]: Mitochondrion 1 GLS
[Glutaminase kidney isoform, mitochondrial 68 kDa chain]: Mitochondrion matrix 1 GLS
[Glutaminase kidney isoform, mitochondrial 65 kDa chain]: Mitochondrion matrix 1 GLS
elastic fiber 1 ELN
multivesicular body, internal vesicle lumen 1 EGFR
Shc-EGFR complex 1 EGFR
catalytic complex 2 PCCA, PCCB
cation-transporting ATPase complex 1 SLC9A1
endoplasmic reticulum tubular network 1 LNPK
endoplasmic reticulum tubular network membrane 1 LNPK
acetyl-CoA carboxylase complex 1 PCCB


文献列表

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  • Toshiaki Komatsu, Hinako Morita, Yoko Takayama, Yui Natsume, Yoshinori Tomoda, Hirohisa Miura, Takeo Sato, Takatoshi Nakamura, Masaya Toda, Hirotsugu Okamoto, Hideaki Hanaki, Koichiro Atsuda. Timing of re-dosing based on population pharmacokinetic-pharmacodynamics target attainment analysis of cefmetazole in subjects undergoing lower gastrointestinal surgery. Journal of infection and chemotherapy : official journal of the Japan Society of Chemotherapy. 2022 Aug; 28(8):1105-1111. doi: 10.1016/j.jiac.2022.03.024. [PMID: 35400549]
  • Yoko Takayama, Toshiaki Komatsu, Takatoshi Nakamura, Yoshinori Tomoda, Masaya Toda, Hirohisa Miura, Takeo Sato, Koichiro Atsuda, Hirotsugu Okamoto, Hideaki Hanaki. Association of serum and fat tissue antibiotic concentrations with surgical site infections in lower gastrointestinal surgery. Surgery. 2022 04; 171(4):1000-1005. doi: 10.1016/j.surg.2021.10.013. [PMID: 34772516]
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  • Toshiki Etani, Minami Asaoka, Shuhei Kondo, Chiharu Wachino, Kaoru Hori, Nobuhiko Shimizu, Yusuke Noda, Takashi Nagai, Satoshi Nozaki, Keitaro Iida, Taku Naiki, Ryosuke Ando, Noriyasu Kawai, Takeshi Yanagita, Atsushi Nakamura, Takahiro Yasui. Efficacy of fosfomycin in the prevention of postoperative infection following transurethral resection of bladder tumor during periods of limited cefazolin, cefotiam, and cefmetazole supply. Journal of infection and chemotherapy : official journal of the Japan Society of Chemotherapy. 2021 Apr; 27(4):625-631. doi: 10.1016/j.jiac.2020.11.025. [PMID: 33309628]
  • Evelina Maines, Giulio Catesini, Sara Boenzi, Antonella Mosca, Manila Candusso, Luca Dello Strologo, Diego Martinelli, Arianna Maiorana, Alessandra Liguori, Giorgia Olivieri, Roberta Taurisano, Fiorella Piemonte, Cristiano Rizzo, Marco Spada, Carlo Dionisi-Vici. Plasma methylcitric acid and its correlations with other disease biomarkers: The impact in the follow up of patients with propionic and methylmalonic acidemia. Journal of inherited metabolic disease. 2020 11; 43(6):1173-1185. doi: 10.1002/jimd.12287. [PMID: 32681732]
  • Osama Y Al-Dirbashi, Charu Sharma, Nahid Al Dahouri, Anas Al Aidaros, Shamma Al-Muhairi, Rami Beiram, Salah Gariballa, Juma Al Kaabi. Role of Functional Biomarkers to Identify Early Vitamin B12 Deficiency in Patients with Sleeve Gastrectomy: A Cross-Sectional Study. Medicina (Kaunas, Lithuania). 2020 Mar; 56(3):. doi: 10.3390/medicina56030142. [PMID: 32245061]
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