Daphnoretin (BioDeep_00000000512)

Main id: BioDeep_00000284752

 

human metabolite PANOMIX_OTCML-2023 blood metabolite natural product


代谢物信息卡片


7-hydroxy-6-methoxy-3-[(2-oxo-2H-chromen-7-yl)oxy]-2H-chromen-2-one

化学式: C19H12O7 (352.0583)
中文名称: 西瑞香素
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: COC1=C(C=C2C(=C1)C=C(C(=O)O2)OC3=CC4=C(C=C3)C=CC(=O)O4)O
InChI: InChI=1S/C19H12O7/c1-23-16-6-11-7-17(19(22)26-15(11)9-13(16)20)24-12-4-2-10-3-5-18(21)25-14(10)8-12/h2-9,20H,1H3

描述信息

Daphnoretin (Dephnoretin), isolated from Wikstroemia indica, possesses antiviral activity[1]. Daphnoretin likes PMA, may direct activation of protein kinase C which in turn activated NADPH oxidase and elicited respiratory burst[2].
Daphnoretin (Dephnoretin), isolated from Wikstroemia indica, possesses antiviral activity[1]. Daphnoretin likes PMA, may direct activation of protein kinase C which in turn activated NADPH oxidase and elicited respiratory burst[2].

同义名列表

6 个代谢物同义名

7-hydroxy-6-methoxy-3-[(2-oxo-2H-chromen-7-yl)oxy]-2H-chromen-2-one; 7-hydroxy-6-methoxy-3,7-dicoumaryl ether; Daphnoretin; Dephnoretin; Thymelol; Daphnoretin



数据库引用编号

18 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

151 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 13 AIMP2, BCL2, CASP12, CASP3, CASP9, CDK2, MAPK3, NLRP3, NR1D1, PIK3CA, PTGS2, STAT3, STAT5A
Peripheral membrane protein 1 PTGS2
Endoplasmic reticulum membrane 3 ATF6, BCL2, PTGS2
Nucleus 12 AIMP2, ATF6, BCL2, CASP3, CASP9, CDK2, ITGB3, MAPK3, NLRP3, NR1D1, STAT3, STAT5A
cytosol 12 AIMP2, ATF6, BCL2, CASP3, CASP9, CDK2, MAPK3, NLRP3, PIK3CA, PRKCQ, STAT3, STAT5A
dendrite 1 NR1D1
nuclear body 1 NR1D1
centrosome 1 CDK2
nucleoplasm 8 ATF6, CASP3, CDK2, ITGB3, MAPK3, NR1D1, STAT3, STAT5A
RNA polymerase II transcription regulator complex 3 ATF6, STAT3, STAT5A
Cell membrane 2 ITGB3, TNF
lamellipodium 1 PIK3CA
ruffle membrane 1 ITGB3
Golgi apparatus membrane 2 ATF6, NLRP3
Synapse 1 ITGB3
cell surface 3 ITGA2B, ITGB3, TNF
glutamatergic synapse 3 CASP3, ITGB3, MAPK3
Golgi apparatus 2 ATF6, MAPK3
Golgi membrane 2 ATF6, NLRP3
neuronal cell body 2 CASP3, TNF
Cytoplasm, cytosol 2 AIMP2, NLRP3
endosome 1 CDK2
plasma membrane 7 ITGA2B, ITGB3, MAPK3, PIK3CA, PRKCQ, STAT3, TNF
Membrane 6 AIMP2, ATF6, BCL2, ITGA2B, ITGB3, NLRP3
apical plasma membrane 1 ITGB3
caveola 2 MAPK3, PTGS2
extracellular exosome 2 ITGA2B, ITGB3
endoplasmic reticulum 5 ATF6, BCL2, CASP12, NLRP3, PTGS2
extracellular space 2 IL10, TNF
perinuclear region of cytoplasm 1 PIK3CA
intercalated disc 1 PIK3CA
mitochondrion 4 BCL2, CASP9, MAPK3, NLRP3
protein-containing complex 4 BCL2, CASP9, ITGB3, PTGS2
Microsome membrane 1 PTGS2
postsynaptic density 1 CASP3
Single-pass type I membrane protein 2 ITGA2B, ITGB3
Secreted 2 IL10, NLRP3
extracellular region 3 IL10, NLRP3, TNF
Mitochondrion outer membrane 1 BCL2
Single-pass membrane protein 1 BCL2
mitochondrial outer membrane 1 BCL2
transcription regulator complex 2 CDK2, STAT3
centriolar satellite 1 PRKCQ
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 CDK2
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
external side of plasma membrane 3 ITGA2B, ITGB3, TNF
dendritic spine 1 NR1D1
Early endosome 1 MAPK3
cell-cell junction 1 ITGB3
recycling endosome 1 TNF
Single-pass type II membrane protein 2 ATF6, TNF
postsynaptic membrane 1 ITGB3
Membrane raft 1 TNF
pore complex 1 BCL2
Cell junction, focal adhesion 2 ITGB3, MAPK3
focal adhesion 3 ITGA2B, ITGB3, MAPK3
Cell projection, dendritic spine 1 NR1D1
Cytoplasm, cytoskeleton, microtubule organizing center 1 NLRP3
Inflammasome 1 NLRP3
interphase microtubule organizing center 1 NLRP3
NLRP3 inflammasome complex 1 NLRP3
Nucleus inner membrane 1 PTGS2
Nucleus outer membrane 1 PTGS2
nuclear inner membrane 1 PTGS2
nuclear outer membrane 1 PTGS2
Postsynaptic cell membrane 1 ITGB3
Late endosome 1 MAPK3
receptor complex 1 ITGB3
neuron projection 1 PTGS2
chromatin 4 ATF6, NR1D1, STAT3, STAT5A
phagocytic cup 1 TNF
cytoskeleton 1 MAPK3
chromosome, telomeric region 1 CDK2
blood microparticle 1 ITGA2B
microvillus membrane 1 ITGB3
nuclear envelope 3 ATF6, CDK2, MAPK3
Endomembrane system 1 NLRP3
Membrane, caveola 1 MAPK3
microtubule organizing center 1 NLRP3
Cell projection, dendrite 1 NR1D1
Melanosome 1 ITGB3
myelin sheath 1 BCL2
pseudopodium 1 MAPK3
filopodium membrane 1 ITGB3
endoplasmic reticulum lumen 2 MAPK3, PTGS2
male germ cell nucleus 1 CDK2
phosphatidylinositol 3-kinase complex 1 PIK3CA
phosphatidylinositol 3-kinase complex, class IA 1 PIK3CA
immunological synapse 1 PRKCQ
aggresome 1 PRKCQ
apoptosome 1 CASP9
Cajal body 1 CDK2
death-inducing signaling complex 1 CASP3
aminoacyl-tRNA synthetase multienzyme complex 1 AIMP2
condensed chromosome 1 CDK2
Nucleus, Cajal body 1 CDK2
platelet alpha granule membrane 2 ITGA2B, ITGB3
X chromosome 1 CDK2
Y chromosome 1 CDK2
integrin complex 2 ITGA2B, ITGB3
cyclin-dependent protein kinase holoenzyme complex 1 CDK2
lamellipodium membrane 1 ITGB3
cyclin E1-CDK2 complex 1 CDK2
cyclin E2-CDK2 complex 1 CDK2
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
alphav-beta3 integrin-vitronectin complex 1 ITGB3
alphav-beta3 integrin-IGF-1-IGF1R complex 1 ITGB3
Cell projection, lamellipodium membrane 1 ITGB3
alpha9-beta1 integrin-ADAM8 complex 1 ITGB3
alphav-beta3 integrin-HMGB1 complex 1 ITGB3
alphav-beta3 integrin-PKCalpha complex 1 ITGB3
glycinergic synapse 1 ITGB3
integrin alphaIIb-beta3 complex 2 ITGA2B, ITGB3
integrin alphav-beta3 complex 1 ITGB3
BAD-BCL-2 complex 1 BCL2
[Processed cyclic AMP-dependent transcription factor ATF-6 alpha]: Nucleus 1 ATF6
cyclin A2-CDK2 complex 1 CDK2
cyclin A1-CDK2 complex 1 CDK2
NLRP1 inflammasome complex 1 CASP12
phosphatidylinositol 3-kinase complex, class IB 1 PIK3CA
caspase complex 1 CASP9
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Sandra Liliana Porras-Dávila, Alejandro Zamilpa, Enrique Jiménez-Ferrer, Antonio Jiménez-Aparicio, Mayra Alejandra Santillán-Urquiza, Fernanda Díaz-Patricio, Maribel Herrera-Ruiz. Anti-inflammatory and Neuroprotective effects of standardized fractions in herniarin and daphnoretin from Distictis buccinatoria. Chemistry & biodiversity. 2023 Mar; ?(?):e202200969. doi: 10.1002/cbdv.202200969. [PMID: 36973180]
  • Yu-Chuen Huang, Chun-Ping Huang, Chin-Ping Lin, Kai-Chien Yang, Yu-Jie Lei, Hao-Pei Wang, Yueh-Hsiung Kuo, Yu-Jen Chen. Naturally Occurring Bicoumarin Compound Daphnoretin Inhibits Growth and Induces Megakaryocytic Differentiation in Human Chronic Myeloid Leukemia Cells. Cells. 2022 10; 11(20):. doi: 10.3390/cells11203252. [PMID: 36291120]
  • Yuanhao Liang, Liang Xu, Hongtian Yang, Wenli Xu, Ruixue Hu, Xiaoying Fan, Yufeng Liu. Analysis on the interaction and binding properties of daphnoretin and human serum albumin in the presence of cisplatin: multi-spectroscopic methods and docking simulation. European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences. 2021 Apr; 159(?):105723. doi: 10.1016/j.ejps.2021.105723. [PMID: 33482316]
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