Baccatin III (BioDeep_00000003704)

Main id: BioDeep_00000230460

 

natural product PANOMIX_OTCML-2023


代谢物信息卡片


Baccatin III

化学式: C31H38O11 (586.2413998)
中文名称: 巴卡亭III, 巴卡丁 III
谱图信息: 最多检出来源 Viridiplantae(plant) 1.93%

分子结构信息

SMILES: CC(=O)OC1C(=O)C2(C)C(O)CC3OCC3(OC(C)=O)C2C(OC(=O)c2ccccc2)C2(O)CC(O)C(C)=C1C2(C)C
InChI: InChI=1S/C31H38O11/c1-15-19(34)13-31(38)26(41-27(37)18-10-8-7-9-11-18)24-29(6,20(35)12-21-30(24,14-39-21)42-17(3)33)25(36)23(40-16(2)32)22(15)28(31,4)5/h7-11,19-21,23-24,26,34-35,38H,12-14H2,1-6H3/t19-,20-,21+,23+,24-,26-,29+,30-,31+/m0/s1

描述信息

C274 - Antineoplastic Agent > C186664 - Cytotoxic Chemotherapeutic Agent > C273 - Antimitotic Agent
relative retention time with respect to 9-anthracene Carboxylic Acid is 1.041
relative retention time with respect to 9-anthracene Carboxylic Acid is 1.042
relative retention time with respect to 9-anthracene Carboxylic Acid is 1.019
relative retention time with respect to 9-anthracene Carboxylic Acid is 1.027
Baccatin III is a natural product isolated from Pacific yew tree and related species. Baccatin III reduces tumor progression by inhibiting the accumulation and suppressive function of MDSCs[1].
Baccatin III is a natural product isolated from Pacific yew tree and related species. Baccatin III reduces tumor progression by inhibiting the accumulation and suppressive function of MDSCs[1].

同义名列表

2 个代谢物同义名

Baccatin III; BCP09552



数据库引用编号

37 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(1)

代谢反应

2 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(1)

  • taxol biosynthesis: acetyl-CoA + taxa-4(20),11-dien-5α-ol ⟶ coenzyme A + taxa-4(20),11-dien-5-α-yl acetate

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(1)

  • taxol biosynthesis: O2 + a reduced [NADPH-hemoprotein reductase] + taxa-4(20),11-dien-5α-ol ⟶ H2O + an oxidized [NADPH-hemoprotein reductase] + taxa-4(20),11-dien-5α,13α-diol

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。



文献列表

  • Ren Xiang Tan, Xiao-Ya Chen. Uncovering the baccatin III biosynthetic pathway for sustainable taxoid supply. Science bulletin. 2024 May; 69(9):1182-1184. doi: 10.1016/j.scib.2024.03.027. [PMID: 38514298]
  • Bin Jiang, Lei Gao, Haijun Wang, Yaping Sun, Xiaolin Zhang, Han Ke, Shengchao Liu, Pengchen Ma, Qinggang Liao, Yue Wang, Huan Wang, Yugeng Liu, Ran Du, Torben Rogge, Wei Li, Yi Shang, K N Houk, Xingyao Xiong, Daoxin Xie, Sanwen Huang, Xiaoguang Lei, Jianbin Yan. Characterization and heterologous reconstitution of Taxus biosynthetic enzymes leading to baccatin III. Science (New York, N.Y.). 2024 Jan; ?(?):eadj3484. doi: 10.1126/science.adj3484. [PMID: 38271490]
  • Youjun Zhang, Lorenz Wiese, Hao Fang, Saleh Alseekh, Leonardo Perez de Souza, Federico Scossa, John Molloy, Mathias Christmann, Alisdair R Fernie. Synthetic biology identifies the minimal gene set required for Paclitaxel biosynthesis in a plant chassis. Molecular plant. 2023 Oct; ?(?):. doi: 10.1016/j.molp.2023.10.016. [PMID: 37897038]
  • Md Nurullah, Zakiya Usmani, Sheeraz Ahmad, Bibhu Prasad Panda, Saima Amin, Showkat Rasool Mir. Purification and characterization of Taxol and 10-Deacetyl baccatin III from the bark, needles, and endophytes of Taxus baccata by preparative high-performance liquid chromatography, ultra-high-performance liquid chromatography-mass spectrometry, and nuclear magnetic resonance. Journal of separation science. 2023 Jan; ?(?):e2200841. doi: 10.1002/jssc.202200841. [PMID: 36695632]
  • Balendra Sah, Kamalraj Subban, Chelliah Jayabaskaran. Biochemical insights into the recombinant 10-deacetylbaccatin III-10-β-O-acetyltransferase enzyme from the Taxol-producing endophytic fungus Lasiodiplodia theobromae. FEMS microbiology letters. 2019 04; 366(7):. doi: 10.1093/femsle/fnz072. [PMID: 31062024]
  • Nael Abutaha, Fahd A Nasr, Mohammed Al-Zharani, Ali S Alqahtani, Omar M Noman, Mohammed Mubarak, Semlali Abdelhabib, Muhammad A Wadaan. Effects of Hexane Root Extract of Ferula hermonis Boiss. on Human Breast and Colon Cancer Cells: An In Vitro and In Vivo Study. BioMed research international. 2019; 2019(?):3079895. doi: 10.1155/2019/3079895. [PMID: 31380416]
  • Lin-Feng You, Tao Wei, Qian-Wang Zheng, Jun-Fang Lin, Li-Qiong Guo, Bing-Hua Jiang, Jia-Jun Huang. Activity Essential Residue Analysis of Taxoid 10β-O-Acetyl Transferase for Enzymatic Synthesis of Baccatin. Applied biochemistry and biotechnology. 2018 Dec; 186(4):949-959. doi: 10.1007/s12010-018-2789-0. [PMID: 29797298]
  • Elina Karhu, Janne Isojärvi, Pia Vuorela, Leena Hanski, Adyary Fallarero. Identification of Privileged Antichlamydial Natural Products by a Ligand-Based Strategy. Journal of natural products. 2017 10; 80(10):2602-2608. doi: 10.1021/acs.jnatprod.6b01052. [PMID: 29043803]
  • Abdollah Kasaei, Mohsen Mobini-Dehkordi, Foruzandeh Mahjoubi, Behnaz Saffar. Isolation of Taxol-Producing Endophytic Fungi from Iranian Yew Through Novel Molecular Approach and Their Effects on Human Breast Cancer Cell Line. Current microbiology. 2017 Jun; 74(6):702-709. doi: 10.1007/s00284-017-1231-0. [PMID: 28332162]
  • Ruth Muchiri, Kevin D Walker. Paclitaxel Biosynthesis: Adenylation and Thiolation Domains of an NRPS TycA PheAT Module Produce Various Arylisoserine CoA Thioesters. Biochemistry. 2017 03; 56(10):1415-1425. doi: 10.1021/acs.biochem.6b01188. [PMID: 28230972]
  • Bin Liu, Xiaoli Gou, Xupeng Bai, Xiangyu Hou, Dongshun Li, Guoping Zhong, Jing Jin, Min Huang. Simultaneous determination of seven taxoids in rat plasma by UPLC-MS/MS and pharmacokinetic study after oral administration of Taxus yunnanensis extracts. Journal of pharmaceutical and biomedical analysis. 2015 Mar; 107(?):346-54. doi: 10.1016/j.jpba.2015.01.001. [PMID: 25645339]
  • Zhang-Hua Sun, Yu Chen, Yan-Qiong Guo, Jie Qiu, Cui-Ge Zhu, Jing Jin, Gui-Hua Tang, Xian-Zhang Bu, Sheng Yin. Isolation and cytotoxicity evaluation of taxanes from the barks of Taxus wallichiana var. mairei. Bioorganic & medicinal chemistry letters. 2015 Mar; 25(6):1240-3. doi: 10.1016/j.bmcl.2015.01.056. [PMID: 25682561]
  • Ana Gallego, Nicole Imseng, Mercedes Bonfill, Rosa M Cusido, Javier Palazon, Regine Eibl, Elisabeth Moyano. Development of a hazel cell culture-based paclitaxel and baccatin III production process on a benchtop scale. Journal of biotechnology. 2015 Feb; 195(?):93-102. doi: 10.1016/j.jbiotec.2014.12.023. [PMID: 25558804]
  • Zhi-Kun Liang, Ruo-Gu Huang, Zhi-Sheng Xie, Xin-Jun Xu. Preparative isolation of paclitaxel and related taxanes from cell cultures of Taxus chinensis using reversed-phase flash chromatography. Natural product research. 2015; 29(4):327-30. doi: 10.1080/14786419.2014.945169. [PMID: 25109635]
  • Fei Han, Lin-Zhi Kang, Xian-Lu Zeng, Zhi-Wei Ye, Li-Qiong Guo, Jun-Fang Lin. Bioproduction of baccatin III, an advanced precursor of paclitaxol, with transgenic Flammulina velutipes expressing the 10-deacetylbaccatin III-10-O-acetyl transferase gene. Journal of the science of food and agriculture. 2014 Sep; 94(12):2376-83. doi: 10.1002/jsfa.6562. [PMID: 24403190]
  • Masoumeh Safari, Faezeh Ghanati, Abazar Hajnoruzi, Ayatollah Rezaei, Parviz Abdolmaleki, Manigeh Mokhtari-Dizaji. Maintenance of membrane integrity and increase of taxanes production in hazel (Corylus avellana L.) cells induced by low-intensity ultrasound. Biotechnology letters. 2012 Jun; 34(6):1137-41. doi: 10.1007/s10529-012-0865-z. [PMID: 22315099]
  • T Grobosch, B Schwarze, D Stoecklein, T Binscheck. Fatal poisoning with Taxus baccata: quantification of paclitaxel (taxol A), 10-deacetyltaxol, baccatin III, 10-deacetylbaccatin III, cephalomannine (taxol B), and 3,5-dimethoxyphenol in body fluids by liquid chromatography-tandem mass spectrometry. Journal of analytical toxicology. 2012 Jan; 36(1):36-43. doi: 10.1093/jat/bkr012. [PMID: 22290751]
  • M Onrubia, E Moyano, M Bonfill, J Palazón, A Goossens, R M Cusidó. The relationship between TXS, DBAT, BAPT and DBTNBT gene expression and taxane production during the development of Taxus baccata plantlets. Plant science : an international journal of experimental plant biology. 2011 Sep; 181(3):282-7. doi: 10.1016/j.plantsci.2011.06.006. [PMID: 21763539]
  • Xin Che, Li Shen, Hui Xu, Ke Liu. Isolation and characterization of process-related impurities and degradation products in larotaxel. Journal of pharmaceutical and biomedical analysis. 2011 Jul; 55(5):1190-6. doi: 10.1016/j.jpba.2011.03.036. [PMID: 21530132]
  • Katarzyna Syklowska-Baranek, Agnieszka Pietrosiuk, Anna Kokoszka, Miroslawa Furmanowa. Enhancement of taxane production in hairy root culture of Taxus x media var. Hicksii. Journal of plant physiology. 2009 Nov; 166(17):1950-4. doi: 10.1016/j.jplph.2009.05.001. [PMID: 19573947]
  • Feng-jian Yang, Hai-he Pang, Xue-ke Zhang, Jia-yin Sun, Yuan-gang Zu. [Quantitative changes of anti-cancer active components in Taxus chinensis var. mairei branches and leaves]. Ying yong sheng tai xue bao = The journal of applied ecology. 2008 Apr; 19(4):911-4. doi: ". [PMID: 18593057]
  • Jianhua Li, Jungui Dai, Xiaoguang Chen, Ping Zhu. Microbial transformation of cephalomannine by Luteibacter sp. Journal of natural products. 2007 Dec; 70(12):1846-9. doi: 10.1021/np0701531. [PMID: 18001087]
  • Yuangang Zu, Yujie Fu, Shuangming Li, Rui Sun, Qingyong Li, Günter Schwarz. Rapid separation of four main taxoids in Taxus species by a combined LLP-SPE-HPLC (PAD) procedure. Journal of separation science. 2006 Jun; 29(9):1237-44. doi: 10.1002/jssc.200500483. [PMID: 16833081]
  • C-F Zhao, L-J Yu, Z Liu, Y-P Sun. The dynamic variation of several important taxane content in post-harvest Taxus chinensis clippings. Journal of Asian natural products research. 2006 Apr; 8(3):229-39. doi: 10.1080/1028602042000324934. [PMID: 16864429]
  • JingHong M Dejong, Yule Liu, Arthur P Bollon, Robert M Long, Stefan Jennewein, David Williams, Rodney B Croteau. Genetic engineering of taxol biosynthetic genes in Saccharomyces cerevisiae. Biotechnology and bioengineering. 2006 Feb; 93(2):212-24. doi: 10.1002/bit.20694. [PMID: 16161138]
  • Chun-fang Zhao, Long-jiang Yu. [LC-ESI-MS metabolic profiling analysis of taxanes from the extracts of Taxus chinensis cell cultures]. Yao xue xue bao = Acta pharmaceutica Sinica. 2005 Aug; 40(8):734-9. doi: . [PMID: 16268509]
  • Hongwei Cui, Fahuan Ge. [Studies on constituents from Taxus mairei Bark]. Zhong yao cai = Zhongyaocai = Journal of Chinese medicinal materials. 2004 Aug; 27(8):566-8. doi: ". [PMID: 15658815]
  • M Ballero, M C Loi, E L M van Rozendaal, T A van Beek, Cees van de Haar, F Poli, G Appendino. Analysis of pharmaceutically relevant taxoids in wild yew trees from Sardinia. Fitoterapia. 2003 Feb; 74(1-2):34-9. doi: 10.1016/s0367-326x(02)00301-5. [PMID: 12628392]
  • Maurice Vanhaelen, Jean Duchateau, Renée Vanhaelen-Fastré, Mondher Jaziri. Taxanes in Taxus baccata pollen: cardiotoxicity and/or allergenicity?. Planta medica. 2002 Jan; 68(1):36-40. doi: 10.1055/s-2002-19865. [PMID: 11842324]
  • F S Gibson, J Wei, P Vemishetti, Q Gao, J L Dillon. Synthesis, utility, and X-ray crystal structure of novel complexes of baccatin III with imidazole and 2-propanol. Organic letters. 2000 Oct; 2(21):3269-71. doi: 10.1021/ol006332q. [PMID: 11029187]
  • S H Sheikh, B A Abela, A Mulchandani. Development of a fluorescence immunoassay for measurement of paclitaxel in human plasma. Analytical biochemistry. 2000 Jul; 283(1):33-8. doi: 10.1006/abio.2000.4630. [PMID: 10929805]
  • K Glowniak, T Mroczek, A M Zobel. Seasonal changes in the concentrations of four taxoids in Taxus baccata L. during the autumn-spring period. Phytomedicine : international journal of phytotherapy and phytopharmacology. 1999 May; 6(2):135-40. doi: 10.1016/s0944-7113(99)80049-x. [PMID: 10374254]
  • K Walker, R E Ketchum, M Hezari, D Gatfield, M Goleniowski, A Barthol, R Croteau. Partial purification and characterization of acetyl coenzyme A: taxa-4(20),11(12)-dien-5alpha-ol O-acetyl transferase that catalyzes the first acylation step of taxol biosynthesis. Archives of biochemistry and biophysics. 1999 Apr; 364(2):273-9. doi: 10.1006/abbi.1999.1125. [PMID: 10190984]
  • R E Ketchum, D M Gibson, R B Croteau, M L Shuler. The kinetics of taxoid accumulation in cell suspension cultures of Taxus following elicitation with methyl jasmonate. Biotechnology and bioengineering. 1999 Jan; 62(1):97-105. doi: 10.1002/(sici)1097-0290(19990105)62:1<97::aid-bit11>3.0.co;2-c. [PMID: 10099517]
  • D D Woo, A P Tabancay, C J Wang. Microtubule active taxanes inhibit polycystic kidney disease progression in cpk mice. Kidney international. 1997 May; 51(5):1613-8. doi: 10.1038/ki.1997.222. [PMID: 9150481]
  • R Zocher, W Weckwerth, C Hacker, B Kammer, T Hornbogen, D Ewald. Biosynthesis of taxol: enzymatic acetylation of 10-deacetylbaccatin-III to baccatin-III in crude extracts from roots of Taxus baccata. Biochemical and biophysical research communications. 1996 Dec; 229(1):16-20. doi: 10.1006/bbrc.1996.1751. [PMID: 8954077]
  • Y Yukimune, H Tabata, Y Higashi, Y Hara. Methyl jasmonate-induced overproduction of paclitaxel and baccatin III in Taxus cell suspension cultures. Nature biotechnology. 1996 Sep; 14(9):1129-32. doi: 10.1038/nbt0996-1129. [PMID: 9631065]
  • V Srinivasan, V Ciddi, V Bringi, M L Shuler. Metabolic inhibitors, elicitors, and precursors as tools for probing yield limitation in taxane production by Taxus chinensis cell cultures. Biotechnology progress. 1996 Jul; 12(4):457-65. doi: 10.1021/bp9600344. [PMID: 8987474]
  • P G Grothaus, G S Bignami, S O'Malley, K E Harada, J B Byrnes, D F Waller, T J Raybould, M T McGuire, B Alvarado. Taxane-specific monoclonal antibodies: measurement of taxol, baccatin III, and "total taxanes" in Taxus brevifolia extracts by enzyme immunoassay. Journal of natural products. 1995 Jul; 58(7):1003-14. doi: 10.1021/np50121a004. [PMID: 7561893]
  • S H Hoke, R G Cooks, C J Chang, R C Kelly, S J Qualls, B Alvarado, M T McGuire, K M Snader. Determination of taxanes in Taxus brevifolia extracts by tandem mass spectrometry and high-performance liquid chromatography. Journal of natural products. 1994 Feb; 57(2):277-86. doi: 10.1021/np50104a013. [PMID: 7909835]
  • P G Grothaus, T J Raybould, G S Bignami, C B Lazo, J B Byrnes. An enzyme immunoassay for the determination of taxol and taxanes in Taxus sp. tissues and human plasma. Journal of immunological methods. 1993 Jan; 158(1):5-15. doi: 10.1016/0022-1759(93)90253-4. [PMID: 8094087]
  • S H Hoke, J M Wood, R G Cooks, X H Li, C J Chang. Rapid screening for taxanes by tandem mass spectrometry. Analytical chemistry. 1992 Oct; 64(20):2313-5. doi: 10.1021/ac00044a002. [PMID: 1361307]
  • N C Wheeler, K Jech, S Masters, S W Brobst, A B Alvarado, A J Hoover, K M Snader. Effects of genetic, epigenetic, and environmental factors on taxol content in Taxus brevifolia and related species. Journal of natural products. 1992 Apr; 55(4):432-40. doi: 10.1021/np50082a005. [PMID: 1355111]
  • C Rao, X Liu, P L Zhang, W M Chen, Q C Fang. [Application of high speed countercurrent chromatography for the isolation of natural products--preparative isolation of taxane-diterpenoids and diterpene alkaloids]. Yao xue xue bao = Acta pharmaceutica Sinica. 1991; 26(7):510-4. doi: ". [PMID: 1687187]
  • S Husted, T Hjort. Sperm antibodies in serum and seminal plasma. International journal of fertility. 1975; 20(2):97-105. doi: NULL. [PMID: 3485]