Neohesperidose (BioDeep_00000019553)

 

Secondary id: BioDeep_00000001005, BioDeep_00001867579

human metabolite PANOMIX_OTCML-2023 Endogenous natural product


代谢物信息卡片


2-methyl-6-{[2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy}oxane-3,4,5-triol

化学式: C12H22O10 (326.1213)
中文名称: 新橙皮糖
谱图信息: 最多检出来源 Chinese Herbal Medicine(otcml) 54.02%

分子结构信息

SMILES: CC1C(C(C(C(O1)OC2C(C(C(OC2O)CO)O)O)O)O)O
InChI: InChI=1S/C12H22O10/c1-3-5(14)7(16)9(18)12(20-3)22-10-8(17)6(15)4(2-13)21-11(10)19/h3-19H,2H2,1H3

描述信息

Neohesperidose is found in citrus. Neohesperidose occurs in plants as disaccharide component of HBH63-H and other glycoside

同义名列表

6 个代谢物同义名

2-methyl-6-{[2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy}oxane-3,4,5-triol; 2-O-(6-Deoxy-a-L-mannopyranosyl)-D-glucose, 9ci; 2-O-alpha-L-Rhamnopyranosyl-D-glucopyranose; Neohesperidose; Sophorabiose; 2-O-alpha-L-Rhamnopyranosyl-D-glucopyranose



数据库引用编号

18 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

8 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 5 DDIT3, MAPK14, PTGS2, TXNL1, XPC
Peripheral membrane protein 2 ACHE, PTGS2
Endoplasmic reticulum membrane 2 HMOX2, PTGS2
Nucleus 10 ACHE, DDIT3, GABPA, LIG4, MAPK14, PCNA, POLD1, POLD2, TXNL1, XPC
cytosol 6 DDIT3, GSR, MAPK14, POLD1, TXNL1, XPC
nuclear body 1 PCNA
centrosome 1 PCNA
nucleoplasm 7 GABPA, LIG4, MAPK14, PCNA, POLD1, POLD2, XPC
RNA polymerase II transcription regulator complex 1 DDIT3
Cell membrane 2 ACHE, TNF
Cytoplasmic side 1 HMOX2
Synapse 1 ACHE
cell surface 2 ACHE, TNF
glutamatergic synapse 1 MAPK14
Golgi apparatus 1 ACHE
Golgi membrane 1 INS
lysosomal membrane 1 GAA
neuromuscular junction 1 ACHE
neuronal cell body 1 TNF
Lysosome 1 GAA
plasma membrane 7 ACHE, BCHE, GAA, HMOX2, TNF, TNFRSF11B, XPC
Membrane 4 ACHE, GAA, HMOX2, POLD1
caveola 1 PTGS2
extracellular exosome 3 GAA, GSR, PCNA
Lysosome membrane 1 GAA
endoplasmic reticulum 1 PTGS2
extracellular space 7 ACHE, BCHE, CXCL8, IL10, INS, TNF, TNFRSF11B
lysosomal lumen 1 GAA
perinuclear region of cytoplasm 1 ACHE
mitochondrion 3 GSR, MAPK14, XPC
protein-containing complex 1 PTGS2
intracellular membrane-bounded organelle 3 GAA, LIG4, XPC
Microsome membrane 2 HMOX2, PTGS2
Secreted 7 ACHE, BCHE, CXCL8, GAA, IL10, INS, TNFRSF11B
extracellular region 9 ACHE, BCHE, CXCL8, GAA, IL10, INS, MAPK14, TNF, TNFRSF11B
mitochondrial matrix 1 GSR
Extracellular side 1 ACHE
transcription regulator complex 1 DDIT3
external side of plasma membrane 2 GSR, TNF
nucleolus 1 XPC
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
Membrane raft 1 TNF
extracellular matrix 1 TNFRSF11B
basement membrane 1 ACHE
nuclear speck 1 MAPK14
Nucleus inner membrane 1 PTGS2
Nucleus outer membrane 1 PTGS2
nuclear inner membrane 1 PTGS2
nuclear outer membrane 1 PTGS2
Late endosome 1 DDIT3
receptor complex 1 TNFRSF11B
neuron projection 1 PTGS2
chromatin 4 DDIT3, GABPA, PCNA, XPC
phagocytic cup 1 TNF
Chromosome 1 XPC
spindle pole 1 MAPK14
nuclear replication fork 1 PCNA
chromosome, telomeric region 2 LIG4, PCNA
blood microparticle 1 BCHE
Lipid-anchor, GPI-anchor 1 ACHE
endosome lumen 1 INS
specific granule membrane 1 HMOX2
tertiary granule membrane 1 GAA
side of membrane 1 ACHE
replication fork 1 PCNA
ficolin-1-rich granule lumen 1 MAPK14
proteasome complex 1 TXNL1
secretory granule lumen 2 INS, MAPK14
Golgi lumen 1 INS
endoplasmic reticulum lumen 3 BCHE, INS, PTGS2
male germ cell nucleus 1 PCNA
transport vesicle 1 INS
azurophil granule membrane 1 GAA
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
aggresome 1 POLD1
Single-pass type IV membrane protein 1 HMOX2
nuclear envelope lumen 1 BCHE
nuclear lamina 1 PCNA
synaptic cleft 1 ACHE
protein-DNA complex 1 DDIT3
ficolin-1-rich granule membrane 1 GAA
condensed chromosome 1 LIG4
zeta DNA polymerase complex 1 POLD2
site of DNA damage 1 XPC
cyclin-dependent protein kinase holoenzyme complex 1 PCNA
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
nucleotide-excision repair complex 2 POLD1, XPC
autolysosome lumen 1 GAA
PCNA complex 1 PCNA
PCNA-p21 complex 1 PCNA
replisome 1 PCNA
DNA-dependent protein kinase-DNA ligase 4 complex 1 LIG4
nonhomologous end joining complex 1 LIG4
CHOP-C/EBP complex 1 DDIT3
CHOP-ATF3 complex 1 DDIT3
CHOP-ATF4 complex 1 DDIT3
[Isoform H]: Cell membrane 1 ACHE
delta DNA polymerase complex 2 POLD1, POLD2
XPC complex 1 XPC
DNA ligase IV complex 1 LIG4
nucleotide-excision repair factor 2 complex 1 XPC
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Junmei Zhang, Jennifer S Brodbelt. Silver complexation and tandem mass spectrometry for differentiation of isomeric flavonoid diglycosides. Analytical chemistry. 2005 Mar; 77(6):1761-70. doi: 10.1021/ac048818g. [PMID: 15762583]