Zinc cation (BioDeep_00001868764)
Main id: BioDeep_00000004371
代谢物信息卡片
Zinc cation
化学式: Zn+2 (63.9291)
中文名称:
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: [Zn+2]
InChI: InChI=1S/Zn/q+2
描述信息
A - Alimentary tract and metabolism > A16 - Other alimentary tract and metabolism products > A16A - Other alimentary tract and metabolism products > A16AB - Enzymes
D000970 - Antineoplastic Agents > D059003 - Topoisomerase Inhibitors > D059004 - Topoisomerase I Inhibitors
C307 - Biological Agent > C29726 - Enzyme Replacement or Supplement Agent
D004791 - Enzyme Inhibitors
同义名列表
2 个代谢物同义名
数据库引用编号
15 个数据库交叉引用编号
- ChEBI: CHEBI:29105
- ChEBI: CHEBI:63056
- KEGG: C00038
- PubChem: 32051
- DrugBank: DB14532
- ChEMBL: CHEMBL1236970
- CAS: 1492823-75-2
- CAS: 126603-04-1
- CAS: 23713-49-7
- CAS: 9025-42-7
- ChEBI: CHEBI:27363
- PubChem: 3340
- PDB-CCD: ZN
- NIKKAJI: J3.735D
- KNApSAcK: 27363
分类词条
相关代谢途径
Reactome(112)
- Metabolism
- Biological oxidations
- Aflatoxin activation and detoxification
- Phase I - Functionalization of compounds
- Metabolism of vitamins and cofactors
- Metabolism of proteins
- Post-translational protein modification
- Gamma carboxylation, hypusinylation, hydroxylation, and arylsulfatase activation
- Disease
- Phase II - Conjugation of compounds
- Amino acid and derivative metabolism
- Diseases of signal transduction by growth factor receptors and second messengers
- Drug ADME
- Asparagine N-linked glycosylation
- Metabolism of lipids
- Metabolism of cofactors
- Diseases of metabolism
- Transport of small molecules
- SLC-mediated transmembrane transport
- Transport of bile salts and organic acids, metal ions and amine compounds
- Choline catabolism
- Methylation
- DNA Repair
- DNA Damage Reversal
- Signaling Pathways
- Mycobacterium tuberculosis biological processes
- Mycothiol metabolism
- Mycothiol-dependent detoxification
- Immune System
- Innate Immune System
- Antimicrobial peptides
- Nucleotide metabolism
- Nucleotide catabolism
- Purine catabolism
- Disorders of transmembrane transporters
- SLC transporter disorders
- Biosynthesis of specialized proresolving mediators (SPMs)
- Biosynthesis of EPA-derived SPMs
- Biosynthesis of E-series 18(R)-resolvins
- Fatty acid metabolism
- Amino acid synthesis and interconversion (transamination)
- Sulfur compound metabolism
- Cysteine synthesis from O-phosphoserine
- Metabolism of water-soluble vitamins and cofactors
- Vitamin B6 activation to pyridoxal phosphate
- Metabolism of nitric oxide: NOS3 activation and regulation
- eNOS activation and regulation
- eNOS activation
- Signaling by Receptor Tyrosine Kinases
- Signaling by VEGF
- VEGFA-VEGFR2 Pathway
- Cellular responses to stimuli
- Cellular responses to stress
- Detoxification of Reactive Oxygen Species
- Infectious disease
- Latent infection of Homo sapiens with Mycobacterium tuberculosis
- Latent infection - Other responses of Mtb to phagocytosis
- Adaptive Immune System
- Infection with Mycobacterium tuberculosis
- Leishmania infection
- Cellular response to chemical stress
- Bacterial Infection Pathways
- Parasitic Infection Pathways
- Arachidonic acid metabolism
- Carbohydrate metabolism
- The citric acid (TCA) cycle and respiratory electron transport
- Pyruvate metabolism and Citric Acid (TCA) cycle
- Integration of energy metabolism
- Heme synthesis
- Phospholipid metabolism
- Glycerophospholipid biosynthesis
- Sulfur amino acid metabolism
- Degradation of cysteine and homocysteine
- Surfactant metabolism
- Tolerance by Mtb to nitric oxide produced by macrophages
- Aspartate and asparagine metabolism
- Viral Infection Pathways
- Porphyrin metabolism
- Heme biosynthesis
- Signaling by GPCR
- GPCR ligand binding
- Class A/1 (Rhodopsin-like receptors)
- Peptide ligand-binding receptors
- GPCR downstream signalling
- G alpha (i) signalling events
- Metal ion SLC transporters
- Hemostasis
- Sphingolipid metabolism
- Interconversion of 2-oxoglutarate and 2-hydroxyglutarate
- Opioid Signalling
- DARPP-32 events
- Transport to the Golgi and subsequent modification
- N-glycan antennae elongation in the medial/trans-Golgi
- Defects in vitamin and cofactor metabolism
- Metal sequestration by antimicrobial proteins
- APAP ADME
- Mycothiol biosynthesis
- Metabolic disorders of biological oxidation enzymes
- Nicotinate metabolism
- Response to metal ions
- Metallothioneins bind metals
- Sphingolipid catabolism
- Digestion and absorption
- Digestion
- VEGFR2 mediated vascular permeability
- Signaling by Nuclear Receptors
- Muscle contraction
- Death Receptor Signaling
- p75 NTR receptor-mediated signalling
- Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation
- Signaling by Retinoic Acid
- RA biosynthesis pathway
BioCyc(301)
- salvage pathways of pyrimidine ribonucleotides
- pyrimidine ribonucleosides degradation
- superpathway of pyrimidine deoxyribonucleoside salvage
- superpathway of pyrimidine ribonucleosides salvage
- pyrimidine ribonucleosides salvage I
- pyrimidine ribonucleosides salvage II
- pyrimidine deoxyribonucleosides salvage
- superpathway of pyrimidine ribonucleosides degradation
- pyrimidine ribonucleosides degradation II
- myricetin gentiobioside biosynthesis
- kaempferol gentiobioside biosynthesis
- allantoin degradation to ureidoglycolate II (ammonia producing)
- allantoin degradation to glyoxylate III
- superpathway of L-phenylalanine biosynthesis
- superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation
- superpathway of N-acetylneuraminate degradation
- superpathway of L-methionine biosynthesis (transsulfuration)
- superpathway of L-homoserine and L-methionine biosynthesis
- L-methionine biosynthesis I
- superpathway of hexitol degradation (bacteria)
- superpathway of L-lysine, L-threonine and L-methionine biosynthesis I
- superpathway of aromatic amino acid biosynthesis
- chorismate biosynthesis I
- chorismate biosynthesis from 3-dehydroquinate
- CMP-3-deoxy-D-manno-octulosonate biosynthesis
- sucrose degradation II (sucrose synthase)
- superpathway of L-tyrosine biosynthesis
- superpathway of hyoscyamine and scopolamine biosynthesis
- superpathway of chorismate metabolism
- aspartate superpathway
- superpathway of betalain biosynthesis
- superpathway of S-adenosyl-L-methionine biosynthesis
- salvianin biosynthesis
- superpathway of L-tryptophan biosynthesis
- pelargonidin conjugates biosynthesis
- superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside)
- shisonin biosynthesis
- superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
- superpathway of anaerobic sucrose degradation
- methanogenesis from acetate
- quercetin gentiotetraside biosynthesis
- chlorzoxazone degradation
- superpathway of tryptophan utilization
- superpathway of glycol metabolism and degradation
- coumarin metabolism (to melilotic acid)
- glycogen degradation I
- glycolate and glyoxylate degradation I
- glycolate and glyoxylate degradation II
- protocatechuate degradation I (meta-cleavage pathway)
- trans-4-hydroxy-L-proline degradation II
- gossypol biosynthesis
- starch biosynthesis
- L-lysine biosynthesis I
- superpathway of fucose and rhamnose degradation
- fucose degradation
- urea cycle
- superpathway of polyamine biosynthesis I
- superpathway of arginine and polyamine biosynthesis
- uracil degradation II (oxidative)
- superpathway of L-citrulline metabolism
- L-citrulline biosynthesis
- L-arginine degradation VIII (arginine oxidase pathway)
- L-arginine degradation VI (arginase 2 pathway)
- L-arginine degradation X (arginine monooxygenase pathway)
- creatinine degradation I
- superpathway of purines degradation in plants
- arginine degradation VI (arginase 2 pathway)
- citrulline biosynthesis
- superpathway of aromatic compound degradation
- methanol oxidation to carbon dioxide
- morphine biosynthesis
- methanol oxidation to formaldehyde III
- methanol oxidation to formaldehyde II
- glycine betaine degradation I
- caffeine degradation III (bacteria, via demethylation)
- formaldehyde oxidation II (glutathione-dependent)
- aurone biosynthesis
- polymethylated quercetin glucoside biosynthesis I - quercetin series (Chrysosplenium)
- polymethylated quercetin glucoside biosynthesis II - quercetagetin series (Chrysosplenium)
- isoflavonoid biosynthesis II
- aflatoxins B1 and G1 biosynthesis
- kaempferide triglycoside biosynthesis
- superpathway of polymethylated quercetin/quercetagetin glucoside biosynthesis (Chrysosplenium)
- L-arabinose degradation I
- D-arabinose degradation I
- superpathway of pentose and pentitol degradation
- ginsenosides biosynthesis
- anhydromuropeptides recycling I
- volatile esters biosynthesis (during fruit ripening)
- hydroxycinnamic acid tyramine amides biosynthesis
- (1,3)-β-D-xylan degradation
- superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass
- superpathay of heme b biosynthesis from glutamate
- TCA cycle I (prokaryotic)
- L-tryptophan degradation I (via anthranilate)
- stachyose biosynthesis
- γ-butyrobetaine degradation
- aromatic biogenic amine degradation (bacteria)
- superpathway of microbial D-galacturonate and D-glucuronate degradation
- L-carnitine degradation II
- mixed acid fermentation
- N-methyl-Δ1-pyrrolinium cation biosynthesis
- nicotine degradation II (pyrrolidine pathway)
- 1,3-propanediol biosynthesis (engineered)
- streptomycin biosynthesis
- superpathway of CMP-sialic acids biosynthesis
- superpathway of glycerol degradation to 1,3-propanediol
- superpathway of glyoxylate bypass and TCA
- tetrapyrrole biosynthesis I (from glutamate)
- germacrene biosynthesis
- isovitexin glycosides biosynthesis
- superpathway of L-lysine degradation
- purine nucleotides degradation II (aerobic)
- L-lysine fermentation to acetate and butanoate
- superpathway of tetrahydrofolate biosynthesis
- superpathway of tetrahydrofolate biosynthesis and salvage
- N10-formyl-tetrahydrofolate biosynthesis
- L-phenylalanine degradation IV (mammalian, via side chain)
- NADH to cytochrome bo oxidase electron transfer I
- NADH to cytochrome bd oxidase electron transfer I
- acetone degradation II (to acetoacetate)
- superpathway of Clostridium acetobutylicum acidogenic and solventogenic fermentation
- superpathway of Clostridium acetobutylicum solventogenic fermentation
- propane degradation I
- ammonia oxidation I (aerobic)
- esculetin modification
- superpathway of scopolin and esculin biosynthesis
- galactitol degradation
- superpathway of glycolysis and the Entner-Doudoroff pathway
- photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
- reactive oxygen species degradation
- NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
- superpathway NAD/NADP - NADH/NADPH interconversion (yeast)
- spermidine biosynthesis I
- gluconeogenesis I
- L-arginine biosynthesis II (acetyl cycle)
- glycolysis II (from fructose 6-phosphate)
- glycolysis I (from glucose 6-phosphate)
- L-rhamnose degradation I
- myo-inositol biosynthesis
- superpathway NAD/NADP - NADH/NADPH interconversion
- NAD/NADP-NADH/NADPH cytosolic interconversion
- galactose degradation I (Leloir pathway)
- D-galactose degradation I (Leloir pathway)
- L-asparagine degradation I
- ammonia oxidation IV (autotrophic ammonia oxidizers)
- nitrifier denitrification
- reductive acetyl coenzyme A pathway II (autotrophic methanogens)
- gluconeogenesis II (Methanobacterium thermoautotrophicum)
- Methanobacterium thermoautotrophicum biosynthetic metabolism
- superpathway of cholesterol degradation I (cholesterol oxidase)
- volatile benzenoid biosynthesis I (ester formation)
- limonene degradation II (L-limonene)
- terrequinone A biosynthesis
- volatile cinnamoic ester biosynthesis
- poly(3-O-β-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis
- L-lysine degradation IV
- L-lysine degradation III
- stephacidin A biosynthesis
- melibiose degradation
- guanosine nucleotides degradation
- purine nucleotides degradation
- fumigaclavine biosynthesis
- trans, trans-farnesyl diphosphate biosynthesis
- homogalacturonan biosynthesis
- allantoin degradation IV (anaerobic)
- 2-nitrobenzoate degradation I
- podophyllotoxin glucosides metabolism
- rosmarinic acid biosynthesis II
- colanic acid building blocks biosynthesis
- conversion of succinate to propanoate
- pyruvate fermentation to acetate and lactate II
- CMP-N-acetylneuraminate biosynthesis I (eukaryotes)
- CDP-archaeol biosynthesis
- archaetidylinositol biosynthesis
- 3-phosphoinositide biosynthesis
- archaetidylserine and archaetidylethanolamine biosynthesis
- methyl indole-3-acetate interconversion
- suberin monomers biosynthesis
- pyrimidine deoxyribonucleotides de novo biosynthesis I
- vitamin B6 degradation
- crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
- superpathway of pyrimidine deoxyribonucleosides degradation
- TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
- geraniol and geranial biosynthesis
- sakuranetin biosynthesis
- propanoyl CoA degradation I
- superpathway of rosmarinic acid biosynthesis
- pyruvate fermentation to (R)-acetoin II
- L-lysine degradation V
- 3-amino-5-hydroxybenzoate biosynthesis
- gliotoxin biosynthesis
- phosphatidylinositol biosynthesis II (eukaryotes)
- 2-oxobutanoate degradation I
- superpathway of purine deoxyribonucleosides degradation
- D-galactose detoxification
- superpathway of adenosine nucleotides de novo biosynthesis I
- trehalose degradation IV
- superpathway of purine nucleotides de novo biosynthesis I
- methylgallate degradation
- 4-amino-3-hydroxybenzoate degradation
- orcinol degradation
- 4-hydroxyphenylacetate degradation
- purine nucleobases degradation I (anaerobic)
- purine nucleobases degradation II (anaerobic)
- 2-hydroxypenta-2,4-dienoate degradation
- emetine biosynthesis
- nitrilotriacetate degradation
- norspermidine biosynthesis
- plaunotol biosynthesis
- superpathway of polyamine biosynthesis III
- superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP)
- superpathway of (R,R)-butanediol biosynthesis
- superpathway of 2,3-butanediol biosynthesis
- taxadiene biosynthesis (engineered)
- GDP-mannose biosynthesis
- superpathway of GDP-mannose-derived O-antigen building blocks biosynthesis
- superpathway of rifamycin B biosynthesis
- superpathway of penicillin, cephalosporin and cephamycin biosynthesis
- deacetylcephalosporin C biosynthesis
- CDP-D-arabitol biosynthesis
- L-histidine biosynthesis
- UDP-N-acetyl-D-glucosamine biosynthesis II
- phosphinothricin tripeptide biosynthesis
- isopenicillin N biosynthesis
- puromycin biosynthesis
- L-arginine biosynthesis I (via L-ornithine)
- L-threonine degradation II
- L-threonine degradation III (to methylglyoxal)
- meta cleavage pathway of aromatic compounds
- superpathway of β-D-glucuronosides degradation
- flaviolin dimer and mompain biosynthesis
- glycolysis V (Pyrococcus)
- L-rhamnose degradation II
- catechol degradation II (meta-cleavage pathway)
- catechol degradation I (meta-cleavage pathway)
- catechol degradation III (ortho-cleavage pathway)
- guanosine nucleotides degradation III
- L-ornithine biosynthesis I
- pyruvate fermentation to lactate
- androstenedione degradation
- methylerythritol phosphate pathway I
- ubiquinol-8 biosynthesis (prokaryotic)
- L-ascorbate biosynthesis IV
- glycerol degradation II
- aminopropanol phosphate biosynthesis II
- D-galacturonate degradation I
- D-fructuronate degradation
- D-galactonate degradation
- betalamic acid biosynthesis
- superpathway of hexuronide and hexuronate degradation
- superpathway of ubiquinol-8 biosynthesis (prokaryotic)
- D-myo-inositol (1,4,5)-trisphosphate biosynthesis
- gentiodelphin biosynthesis
- di-myo-inositol phosphate biosynthesis
- superpathway of L-threonine metabolism
- superpathway of anthocyanin biosynthesis (from delphinidin 3-O-glucoside)
- L-carnitine biosynthesis
- (S)-reticuline biosynthesis I
- superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis
- 2'-deoxy-α-D-ribose 1-phosphate degradation
- trehalose biosynthesis I
- superpathway of L-methionine salvage and degradation
- erythro-tetrahydrobiopterin biosynthesis I
- 3-dehydroquinate biosynthesis I
- glutathione degradation (DUG pathway - yeast)
- complex N-linked glycan biosynthesis (vertebrates)
- complex N-linked glycan biosynthesis (plants)
- adenosine nucleotides de novo biosynthesis
- superpathway of glutathione metabolism (truncated γ-glutamyl cycle)
- glutathione degradation
- glutathione degradation (DUG pathway)
- trehalose biosynthesis
- epoxypseudoisoeugenol-2-methylbutanoate biosynthesis
- succinate to cytochrome bo oxidase electron transfer
- NADH to cytochrome bo oxidase electron transfer II
- D-lactate to cytochrome bo oxidase electron transfer
- glycerol-3-phosphate to cytochrome bo oxidase electron transfer
- proline to cytochrome bo oxidase electron transfer
- pyruvate to cytochrome bo oxidase electron transfer
- pyrimidine nucleobases salvage II
- t-anethole biosynthesis
- trehalose degradation V
- trehalose biosynthesis V
- trehalose biosynthesis IV
- γ-resorcylate degradation I
- stipitatate biosynthesis
- phytate degradation I
- myo-inositol degradation II
- glycine betaine biosynthesis I (Gram-negative bacteria)
- triacylglycerol degradation
- paxilline and diprenylpaxilline biosynthesis
- tRNA charging
- cichoriin interconversion
- (R,R)-butanediol degradation
- (R,R)-butanediol biosynthesis
- superpathway of acetoin and butanediol biosynthesis
- butanediol biosynthesis
- thiocyanate degradation II
- carbon disulfide oxidation I (anaerobic)
- uracil degradation I (reductive)
PlantCyc(54)
- quercetin gentiotetraside biosynthesis
- kaempferol gentiobioside biosynthesis
- superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
- superpathway of hyoscyamine and scopolamine biosynthesis
- salvianin biosynthesis
- shisonin biosynthesis
- pelargonidin conjugates biosynthesis
- superpathway of betalain biosynthesis
- flavonol glucosylation I
- myricetin gentiobioside biosynthesis
- superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside)
- superpathway of anaerobic sucrose degradation
- sucrose degradation II (sucrose synthase)
- coumarin metabolism (to melilotic acid)
- hydroxycinnamic acid tyramine amides biosynthesis
- gossypol biosynthesis
- luteolin biosynthesis
- superpathway of purines degradation in plants
- morphine biosynthesis
- purine nucleotides degradation I (plants)
- aurone biosynthesis
- polymethylated quercetin glucoside biosynthesis I - quercetin series (Chrysosplenium)
- polymethylated quercetin glucoside biosynthesis II - quercetagetin series (Chrysosplenium)
- kaempferide triglycoside biosynthesis
- superpathway of polymethylated quercetin/quercetagetin glucoside biosynthesis (Chrysosplenium)
- volatile esters biosynthesis (during fruit ripening)
- guanosine nucleotides degradation II
- superpathway of guanosine nucleotides degradation (plants)
- guanosine nucleotides degradation I
- stachyose biosynthesis
- N-methyl-Δ1-pyrrolinium cation biosynthesis
- esculetin modification
- superpathway of scopolin and esculin biosynthesis
- volatile benzenoid biosynthesis I (ester formation)
- volatile cinnamoic ester biosynthesis
- superpathway of anthocyanin biosynthesis (from delphinidin 3-O-glucoside)
- methyl indole-3-acetate interconversion
- L-histidine biosynthesis
- plaunotol biosynthesis
- podophyllotoxin glucosides metabolism
- sakuranetin biosynthesis
- (S)-reticuline biosynthesis I
- suberin monomers biosynthesis
- D-galactose detoxification
- rosmarinic acid biosynthesis II
- superpathway of rosmarinic acid biosynthesis
- geraniol and geranial biosynthesis
- homogalacturonan biosynthesis
- UDP-galactose biosynthesis (salvage pathway from galactose using UDP-glucose)
- emetine biosynthesis
- betalamic acid biosynthesis
- gentiodelphin biosynthesis
- chrysin biosynthesis
- phytate degradation I
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
2 个相关的物种来源信息
- 992 - Flexibacter: 10.7164/ANTIBIOTICS.43.158
- 9606 - Homo sapiens: 10.1007/S11306-016-1051-4
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
文献列表
- Heather L Hartman, Katherine E Bowers, Carol A Fierke. Lysine beta311 of protein geranylgeranyltransferase type I partially replaces magnesium.
The Journal of biological chemistry.
2004 Jul; 279(29):30546-53. doi:
10.1074/jbc.m403469200. [PMID: 15131129] - D Miyamoto, Y Kusagaya, N Endo, A Sometani, S Takeo, T Suzuki, Y Arima, K Nakajima, Y Suzuki. Thujaplicin-copper chelates inhibit replication of human influenza viruses.
Antiviral research.
1998 Aug; 39(2):89-100. doi:
10.1016/s0166-3542(98)00034-5. [PMID: 9806486]
