D-Arabinopyranose (BioDeep_00000177882)

   

human metabolite blood metabolite natural product


代谢物信息卡片


oxane-2,3,4,5-tetrol

化学式: C5H10O5 (150.0528)
中文名称: L-阿拉伯糖
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C1C(C(C(C(O1)O)O)O)O
InChI: InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2

描述信息

同义名列表

8 个代谢物同义名

oxane-2,3,4,5-tetrol; D-Arabinopyranose; L-Arabinopyranose; Ketopentoses; Ketopentose; Pentoses; Pentose; Xylose



数据库引用编号

25 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

24 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 9 AKR1B1, CAT, G6PD, GAPDH, GCK, HAND1, PGD, PKM, RBKS
Peripheral membrane protein 2 G6PD, GCK
Endoplasmic reticulum membrane 1 TKT
Nucleus 8 CS, GAPDH, GCK, HAND1, PGD, PKM, RBKS, TAL1
cytosol 15 AKR1B1, CAT, G6PD, GAPDH, GCK, GLS, GSR, PGD, PKM, RBKS, RPE, SLC2A1, TKT, UPP1, XYLB
nuclear body 1 TKT
nucleoplasm 6 AKR1B1, GCK, HAND1, TAL1, TKT, UPP1
RNA polymerase II transcription regulator complex 1 HAND1
Cell membrane 2 SLC2A1, TKT
Multi-pass membrane protein 1 SLC2A1
Golgi apparatus membrane 1 GCK
Synapse 1 GLS
Golgi membrane 3 GCK, INS, SLC2A1
sarcolemma 1 SLC2A1
Cytoplasm, cytosol 3 G6PD, GAPDH, GLS
Presynapse 1 SLC2A1
plasma membrane 3 GAPDH, SLC2A1, TKT
Membrane 5 CAT, CS, G6PD, GAPDH, SLC2A1
apical plasma membrane 2 SLC2A1, TKT
basolateral plasma membrane 2 GCK, SLC2A1
caveola 1 SLC2A1
extracellular exosome 11 AKR1B1, CAT, CS, G6PD, GAPDH, GSR, PGD, PKM, RPE, SLC2A1, TKT
endoplasmic reticulum 1 H6PD
extracellular space 2 AKR1B1, INS
perinuclear region of cytoplasm 1 GAPDH
intercalated disc 1 SLC2A1
mitochondrion 7 AKR1B1, CAT, CS, GCK, GLS, GSR, PKM
protein-containing complex 1 CAT
intracellular membrane-bounded organelle 3 CAT, G6PD, GAPDH
Single-pass type I membrane protein 1 TKT
Secreted 1 INS
extracellular region 3 CAT, INS, PKM
cytoplasmic side of plasma membrane 1 G6PD
Mitochondrion matrix 1 CS
mitochondrial matrix 4 CAT, CS, GLS, GSR
transcription regulator complex 1 TAL1
centriolar satellite 1 G6PD
photoreceptor inner segment 1 SLC2A1
nuclear membrane 1 GAPDH
external side of plasma membrane 1 GSR
Extracellular vesicle 1 PKM
actin cytoskeleton 1 TKT
Z disc 1 SLC2A1
microtubule cytoskeleton 1 GAPDH
nucleolus 1 HAND1
midbody 1 SLC2A1
vesicle 3 GAPDH, PKM, TKT
Cytoplasm, perinuclear region 1 GAPDH
Cytoplasm, cytoskeleton 1 GAPDH
focal adhesion 2 CAT, TKT
Peroxisome 2 CAT, TKT
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
collagen-containing extracellular matrix 1 PKM
receptor complex 1 TKT
cilium 1 PKM
chromatin 2 HAND1, TAL1
cytoskeleton 1 GAPDH
[Isoform 1]: Mitochondrion 1 GLS
Nucleus, nucleolus 1 HAND1
blood microparticle 1 SLC2A1
Basolateral cell membrane 1 GCK
endosome lumen 1 INS
Lipid droplet 1 GAPDH
female germ cell nucleus 1 SLC2A1
Nucleus, nucleoplasm 1 HAND1
Melanosome 1 SLC2A1
ficolin-1-rich granule lumen 2 CAT, PKM
secretory granule lumen 3 CAT, INS, PKM
Golgi lumen 1 INS
endoplasmic reticulum lumen 2 H6PD, INS
cortical actin cytoskeleton 1 SLC2A1
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
ribonucleoprotein complex 1 GAPDH
female pronucleus 1 SLC2A1
Rough endoplasmic reticulum 1 PKM
[Isoform 3]: Mitochondrion 1 GLS
GAIT complex 1 GAPDH
[Glutaminase kidney isoform, mitochondrial 68 kDa chain]: Mitochondrion matrix 1 GLS
[Glutaminase kidney isoform, mitochondrial 65 kDa chain]: Mitochondrion matrix 1 GLS
catalase complex 1 CAT
glucose transporter complex 1 SLC2A1
[Isoform M2]: Cytoplasm 1 PKM
[Isoform M1]: Cytoplasm 1 PKM


文献列表

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  • Yun Bai, Haihang Yu, Lifei Chen, Yuan Meng, Yanmei Ma, Di Wang, Ying Qian, Dongyang Zhang, Xiaoyu Feng, Yunwei Zhou. Time-Course Transcriptome Analysis of Aquilegia vulgaris Root Reveals the Cell Wall's Roles in Salinity Tolerance. International journal of molecular sciences. 2023 Nov; 24(22):. doi: 10.3390/ijms242216450. [PMID: 38003641]
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