O-Bromophenol (BioDeep_00001871368)

Main id: BioDeep_00000010176

 


代谢物信息卡片


O-Bromophenol

化学式: C6H5BrO (171.9524)
中文名称: 2-溴苯酚
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C1=CC=C(C(=C1)O)Br
InChI: InChI=1S/C6H5BrO/c7-5-3-1-2-4-6(5)8/h1-4,8H

描述信息

同义名列表

3 个代谢物同义名

O-Bromophenol; 2-BROMOPHENOL; 2-Bromophenol



数据库引用编号

12 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 14 AKT1, BCL2, CA1, CA2, CASP3, MTOR, NOS3, PIK3CA, PTPN1, PTPN11, PTPN2, PTPN6, PTS, VEGFA
Peripheral membrane protein 3 ACHE, MTOR, PTPN1
Endoplasmic reticulum membrane 3 BCL2, MTOR, PTPN1
Nucleus 11 ACHE, AKT1, BCL2, CASP3, KDR, MTOR, NOS3, PTPN11, PTPN2, PTPN6, VEGFA
cytosol 13 AKT1, BCL2, CA1, CA2, CASP3, MTOR, NOS3, PIK3CA, PTPN1, PTPN11, PTPN2, PTPN6, PTS
dendrite 1 MTOR
phagocytic vesicle 1 MTOR
nucleoplasm 7 AKT1, CASP3, MTOR, NOS3, PTPN11, PTPN2, PTPN6
Cell membrane 5 ACHE, AKT1, CA2, KDR, TNF
Cytoplasmic side 2 MTOR, PTPN1
lamellipodium 2 AKT1, PIK3CA
Golgi apparatus membrane 1 MTOR
Synapse 1 ACHE
cell cortex 1 AKT1
cell junction 1 KDR
cell surface 3 ACHE, TNF, VEGFA
glutamatergic synapse 3 AKT1, CASP3, PTPN1
Golgi apparatus 4 ACHE, KDR, NOS3, VEGFA
Golgi membrane 3 INS, MTOR, NOS3
lysosomal membrane 2 GAA, MTOR
neuromuscular junction 1 ACHE
neuronal cell body 2 CASP3, TNF
postsynapse 2 AKT1, PTPN1
Lysosome 2 GAA, MTOR
endosome 1 KDR
plasma membrane 10 ACHE, AKT1, CA2, GAA, KDR, NOS3, PIK3CA, PTPN2, PTPN6, TNF
Membrane 9 ACHE, AKT1, BCL2, GAA, MTOR, PTPN1, PTPN2, PTPN6, VEGFA
caveola 1 NOS3
extracellular exosome 4 CA1, CA2, GAA, PTPN6
Lysosome membrane 2 GAA, MTOR
endoplasmic reticulum 5 BCL2, KDR, PTPN1, PTPN2, VEGFA
extracellular space 5 ACHE, IL6, INS, TNF, VEGFA
lysosomal lumen 1 GAA
perinuclear region of cytoplasm 3 ACHE, NOS3, PIK3CA
adherens junction 1 VEGFA
intercalated disc 1 PIK3CA
mitochondrion 3 BCL2, PTPN11, PTS
protein-containing complex 5 AKT1, BCL2, PTPN1, PTPN11, PTPN6
intracellular membrane-bounded organelle 1 GAA
Microsome membrane 1 MTOR
postsynaptic density 1 CASP3
TORC1 complex 1 MTOR
TORC2 complex 1 MTOR
Secreted 5 ACHE, GAA, IL6, INS, VEGFA
extracellular region 8 ACHE, GAA, IL6, INS, KDR, PTPN6, TNF, VEGFA
Mitochondrion outer membrane 2 BCL2, MTOR
Single-pass membrane protein 1 BCL2
mitochondrial outer membrane 2 BCL2, MTOR
[Isoform 2]: Secreted 1 KDR
mitochondrial matrix 1 PTPN1
Extracellular side 1 ACHE
anchoring junction 1 KDR
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
external side of plasma membrane 2 KDR, TNF
Secreted, extracellular space, extracellular matrix 1 VEGFA
microtubule cytoskeleton 1 AKT1
nucleolus 1 PTPN6
Cytoplasm, P-body 1 NOS3
P-body 1 NOS3
Early endosome 2 KDR, PTPN1
apical part of cell 1 CA2
cell-cell junction 2 AKT1, PTPN6
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
vesicle 1 AKT1
Membrane raft 2 KDR, TNF
pore complex 1 BCL2
spindle 1 AKT1
extracellular matrix 1 VEGFA
basement membrane 1 ACHE
Nucleus, PML body 1 MTOR
PML body 1 MTOR
Mitochondrion intermembrane space 1 AKT1
mitochondrial intermembrane space 1 AKT1
secretory granule 1 VEGFA
receptor complex 1 KDR
ciliary basal body 1 AKT1
phagocytic cup 1 TNF
cytoskeleton 1 NOS3
mitochondrial crista 1 PTPN1
[Isoform 1]: Endoplasmic reticulum 1 PTPN2
Lipid-anchor, GPI-anchor 1 ACHE
nuclear envelope 1 MTOR
Endomembrane system 3 MTOR, PTPN1, PTPN2
endosome lumen 3 INS, PTPN1, PTPN2
sorting endosome 2 KDR, PTPN1
tertiary granule membrane 1 GAA
Cytoplasm, Stress granule 1 NOS3
cytoplasmic stress granule 1 NOS3
side of membrane 1 ACHE
myelin sheath 2 BCL2, CA2
secretory granule lumen 1 INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 2 IL6, INS
platelet alpha granule lumen 1 VEGFA
phosphatidylinositol 3-kinase complex 1 PIK3CA
phosphatidylinositol 3-kinase complex, class IA 1 PIK3CA
specific granule lumen 1 PTPN6
tertiary granule lumen 1 PTPN6
endocytic vesicle membrane 1 NOS3
transport vesicle 1 INS
azurophil granule membrane 1 GAA
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
endoplasmic reticulum-Golgi intermediate compartment 1 PTPN2
synaptic cleft 1 ACHE
ficolin-1-rich granule membrane 1 GAA
death-inducing signaling complex 1 CASP3
Cytoplasmic vesicle, phagosome 1 MTOR
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
alpha-beta T cell receptor complex 1 PTPN6
interleukin-6 receptor complex 1 IL6
autolysosome lumen 1 GAA
BAD-BCL-2 complex 1 BCL2
[N-VEGF]: Cytoplasm 1 VEGFA
[VEGFA]: Secreted 1 VEGFA
[Isoform L-VEGF189]: Endoplasmic reticulum 1 VEGFA
[Isoform VEGF121]: Secreted 1 VEGFA
[Isoform VEGF165]: Secreted 1 VEGFA
VEGF-A complex 1 VEGFA
cytoplasmic side of endoplasmic reticulum membrane 1 PTPN1
[Isoform H]: Cell membrane 1 ACHE
phosphatidylinositol 3-kinase complex, class IB 1 PIK3CA
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Kyrillos N Adesina-Georgiadis, Nicola Gray, Robert S Plumb, David F Thompson, Elaine Holmes, Jeremy K Nicholson, Ian D Wilson. The metabolic fate and effects of 2-Bromophenol in male Sprague-Dawley rats. Xenobiotica; the fate of foreign compounds in biological systems. 2019 Nov; 49(11):1352-1359. doi: 10.1080/00498254.2018.1559376. [PMID: 30557119]
  • Nicola Gray, Kyrillos Adesina-Georgiadis, Elena Chekmeneva, Robert S Plumb, Ian D Wilson, Jeremy K Nicholson. Development of a Rapid Microbore Metabolic Profiling Ultraperformance Liquid Chromatography-Mass Spectrometry Approach for High-Throughput Phenotyping Studies. Analytical chemistry. 2016 06; 88(11):5742-51. doi: 10.1021/acs.analchem.6b00038. [PMID: 27116471]
  • Feng Xiao, Xiangru Zhang, Hongyan Zhai, Irene M C Lo, George L Tipoe, Mengting Yang, Yang Pan, Guanghao Chen. New halogenated disinfection byproducts in swimming pool water and their permeability across skin. Environmental science & technology. 2012 Jul; 46(13):7112-9. doi: 10.1021/es3010656. [PMID: 22697042]
  • Jackie Campbell, Hongtao Zhang, Michael J Giroux, Leila Feiz, Yue Jin, Meinan Wang, Xianming Chen, Li Huang. A mutagenesis-derived broad-spectrum disease resistance locus in wheat. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jul; 125(2):391-404. doi: 10.1007/s00122-012-1841-7. [PMID: 22446929]
  • Qing Zhu, Xiao Su, Hai-Jun Wu, Yan-Jun Zhai, Jin-Ming Xia, Buhebate, Yi-Zhuang Xu, Jin-Guang Wu. [The analysis for silver iodide fine particles of TLC/FTIR matrix]. Guang pu xue yu guang pu fen xi = Guang pu. 2012 Jul; 32(7):1790-4. doi: ". [PMID: 23016326]
  • Min Kyong Moon, Min Joo Kim, In Kyung Jung, Young Do Koo, Hwa Young Ann, Kwan Jae Lee, Soon Hee Kim, Yeo Cho Yoon, Bong-Jun Cho, Kyong Soo Park, Hak C Jang, Young Joo Park. Bisphenol A impairs mitochondrial function in the liver at doses below the no observed adverse effect level. Journal of Korean medical science. 2012 Jun; 27(6):644-52. doi: 10.3346/jkms.2012.27.6.644. [PMID: 22690096]
  • Dorota Formanowicz, Piotr Formanowicz. Transferrin changes in haemodialysed patients. International urology and nephrology. 2012 Jun; 44(3):907-19. doi: 10.1007/s11255-011-9947-4. [PMID: 21455763]
  • Jia Xiao, Emily C Liong, Ming-Tat Ling, Yick-Pang Ching, Man-Lung Fung, George L Tipoe. S-allylmercaptocysteine reduces carbon tetrachloride-induced hepatic oxidative stress and necroinflammation via nuclear factor kappa B-dependent pathways in mice. European journal of nutrition. 2012 Apr; 51(3):323-33. doi: 10.1007/s00394-011-0217-0. [PMID: 21681437]
  • Qiu-Fang Xu, Wei-Shun Cheng, Shuang-Sheng Li, Wen Li, Zhi-Xin Zhang, You-Ping Xu, Xue-Ping Zhou, Xin-Zhong Cai. Identification of genes required for Cf-dependent hypersensitive cell death by combined proteomic and RNA interfering analyses. Journal of experimental botany. 2012 Apr; 63(7):2421-35. doi: 10.1093/jxb/err397. [PMID: 22275387]
  • Zhongzan Cao, Zongxi Han, Yuhao Shao, Xiaoli Liu, Junfeng Sun, Demin Yu, Xiangang Kong, Shengwang Liu. Proteomics analysis of differentially expressed proteins in chicken trachea and kidney after infection with the highly virulent and attenuated coronavirus infectious bronchitis virus in vivo. Proteome science. 2012 Mar; 10(?):24. doi: 10.1186/1477-5956-10-24. [PMID: 22463732]
  • Myung Hee Nam, Sun Mi Huh, Kyung Mi Kim, Woong June Park, Jong Bok Seo, Kun Cho, Dool Yi Kim, Beom Gi Kim, In Sun Yoon. Comparative proteomic analysis of early salt stress-responsive proteins in roots of SnRK2 transgenic rice. Proteome science. 2012 Mar; 10(?):25. doi: 10.1186/1477-5956-10-25. [PMID: 22462395]
  • Andrew G Netting, Julian C Theobald, Ian C Dodd. Xylem sap collection and extraction methodologies to determine in vivo concentrations of ABA and its bound forms by gas chromatography-mass spectrometry (GC-MS). Plant methods. 2012 Mar; 8(?):11. doi: 10.1186/1746-4811-8-11. [PMID: 22439865]
  • Norhaniza Aminudin, Nur-Atiqah H Abdullah, Hasni Misbah, Saiful A Karsani, Ruby Husain, See Z Hoe, Onn H Hashim. Treatment with captopril abrogates the altered expression of alpha1 macroglobulin and alpha1 antiproteinase in sera of spontaneously hypertensive rats. Proteome science. 2012 Mar; 10(1):17. doi: 10.1186/1477-5956-10-17. [PMID: 22416803]
  • Andrea Maria Blanc, Mabel Beatriz Berois, Lorena Magalí Tomé, Alberto L Epstein, Juan Ramón Arbiza. Induction of humoral responses to BHV-1 glycoprotein D expressed by HSV-1 amplicon vectors. Journal of veterinary science. 2012 Mar; 13(1):59-65. doi: 10.4142/jvs.2012.13.1.59. [PMID: 22437537]
  • Erika M de Jesus, Edgar A Ochoa Cruz, Guilherme M Q Cruz, Marie-Anne Van Sluys. Diversification of hAT transposase paralogues in the sugarcane genome. Molecular genetics and genomics : MGG. 2012 Mar; 287(3):205-19. doi: 10.1007/s00438-011-0670-8. [PMID: 22228195]
  • Yan Wang, Xiaoli Peng, Wentao Xu, Yunbo Luo, Weiwei Zhao, Junran Hao, Zhihong Liang, Yu Zhang, Kunlun Huang. Transcript and protein profiling analysis of OTA-induced cell death reveals the regulation of the toxicity response process in Arabidopsis thaliana. Journal of experimental botany. 2012 Mar; 63(5):2171-87. doi: 10.1093/jxb/err447. [PMID: 22207617]
  • Stuart Kyle, Kier A R James, Michael J McPherson. Recombinant production of the therapeutic peptide lunasin. Microbial cell factories. 2012 Feb; 11(?):28. doi: 10.1186/1475-2859-11-28. [PMID: 22376274]
  • Lu Zhang, Qingzhong Wang, Wenjie Wang, Yanyan Liu, Jie Wang, Jun Yue, Ying Xu, Wenxi Xu, Zhenling Cui, Xuelian Zhang, Honghai Wang. Identification of putative biomarkers for the serodiagnosis of drug-resistant Mycobacterium tuberculosis. Proteome science. 2012 Feb; 10(?):12. doi: 10.1186/1477-5956-10-12. [PMID: 22364187]
  • Hisae Yoshitomi, Xiangyu Guo, Tonghua Liu, Ming Gao. Guava leaf extracts alleviate fatty liver via expression of adiponectin receptors in SHRSP.Z-Leprfa/Izm rats. Nutrition & metabolism. 2012 Feb; 9(?):13. doi: 10.1186/1743-7075-9-13. [PMID: 22348333]
  • Jolyon Terragni, Jurate Bitinaite, Yu Zheng, Sriharsa Pradhan. Biochemical characterization of recombinant β-glucosyltransferase and analysis of global 5-hydroxymethylcytosine in unique genomes. Biochemistry. 2012 Feb; 51(5):1009-19. doi: 10.1021/bi2014739. [PMID: 22229759]
  • Lotta Holm, Gareth L Ackland, Mark R Edwards, Ross A Breckenridge, Robert B Sim, John Offer. Chemical labelling of active serum thioester proteins for quantification. Immunobiology. 2012 Feb; 217(2):256-64. doi: 10.1016/j.imbio.2011.07.021. [PMID: 21852021]
  • Yafei Qi, Ute Armbruster, Christian Schmitz-Linneweber, Etienne Delannoy, Andeol Falcon de Longevialle, Thilo Rühle, Ian Small, Peter Jahns, Dario Leister. Arabidopsis CSP41 proteins form multimeric complexes that bind and stabilize distinct plastid transcripts. Journal of experimental botany. 2012 Feb; 63(3):1251-70. doi: 10.1093/jxb/err347. [PMID: 22090436]
  • Eva Szafranski-Schneider, Marc Swidergall, Fabien Cottier, Denis Tielker, Elvira Román, Jesus Pla, Joachim F Ernst. Msb2 shedding protects Candida albicans against antimicrobial peptides. PLoS pathogens. 2012 Feb; 8(2):e1002501. doi: 10.1371/journal.ppat.1002501. [PMID: 22319443]
  • Fushan Liu, Zaheer Ahmed, Elizabeth A Lee, Elizabeth Donner, Qiang Liu, Regina Ahmed, Matthew K Morell, Michael J Emes, Ian J Tetlow. Allelic variants of the amylose extender mutation of maize demonstrate phenotypic variation in starch structure resulting from modified protein-protein interactions. Journal of experimental botany. 2012 Feb; 63(3):1167-83. doi: 10.1093/jxb/err341. [PMID: 22121198]
  • Ben J Tolley, Helen Woodfield, Samart Wanchana, Richard Bruskiewich, Julian M Hibberd. Light-regulated and cell-specific methylation of the maize PEPC promoter. Journal of experimental botany. 2012 Feb; 63(3):1381-90. doi: 10.1093/jxb/err367. [PMID: 22143916]
  • Shen Wan, Amanda M Johnson, Illimar Altosaar. Expression of nitrous oxide reductase from Pseudomonas stutzeri in transgenic tobacco roots using the root-specific rolD promoter from Agrobacterium rhizogenes. Ecology and evolution. 2012 Feb; 2(2):286-97. doi: 10.1002/ece3.74. [PMID: 22423324]
  • Weimin Hu, Ritsuko Narasaki, Naoko Nishimura, Keiji Hasumi. SMTP (Stachybotrys microspora triprenyl phenol) enhances clot clearance in a pulmonary embolism model in rats. Thrombosis journal. 2012 Jan; 10(1):2. doi: 10.1186/1477-9560-10-2. [PMID: 22230042]
  • Azadeh Nilghaz, Dedy H B Wicaksono, Dwi Gustiono, Fadzilah Adibah Abdul Majid, Eko Supriyanto, Mohammed Rafiq Abdul Kadir. Flexible microfluidic cloth-based analytical devices using a low-cost wax patterning technique. Lab on a chip. 2012 Jan; 12(1):209-18. doi: 10.1039/c1lc20764d. [PMID: 22089026]
  • Chia-Yen Hsiao, Ching-Yi Hung, Tung-Hu Tsai, Kin-Fu Chak. A Study of the Wound Healing Mechanism of a Traditional Chinese Medicine, Angelica sinensis, Using a Proteomic Approach. Evidence-based complementary and alternative medicine : eCAM. 2012; 2012(?):467531. doi: 10.1155/2012/467531. [PMID: 22536285]
  • Verena Ibl, Edina Csaszar, Nicole Schlager, Susanne Neubert, Christoph Spitzer, Marie-Theres Hauser. Interactome of the plant-specific ESCRT-III component AtVPS2.2 in Arabidopsis thaliana. Journal of proteome research. 2012 Jan; 11(1):397-411. doi: 10.1021/pr200845n. [PMID: 22010978]
  • Paola Brun, Paola Brun, Maria Vono, Paola Venier, Elena Tarricone, Velika Deligianni, Emilio Martines, Matteo Zuin, Silvia Spagnolo, Roberto Cavazzana, Romilda Cardin, Ignazio Castagliuolo, Alvise La Gloria Valerio, Andrea Leonardi. Disinfection of ocular cells and tissues by atmospheric-pressure cold plasma. PloS one. 2012; 7(3):e33245. doi: 10.1371/journal.pone.0033245. [PMID: 22432007]
  • Andrea Hirsch, Dagmar Hahn, Petra Kempná, Gaby Hofer, Primus E Mullis, Jean-Marc Nuoffer, Christa E Flück. Role of AMP-activated protein kinase on steroid hormone biosynthesis in adrenal NCI-H295R cells. PloS one. 2012; 7(1):e30956. doi: 10.1371/journal.pone.0030956. [PMID: 22295121]
  • Da-Wei Xin, Sha Liao, Zhi-Ping Xie, Dagmar R Hann, Lea Steinle, Thomas Boller, Christian Staehelin. Functional analysis of NopM, a novel E3 ubiquitin ligase (NEL) domain effector of Rhizobium sp. strain NGR234. PLoS pathogens. 2012; 8(5):e1002707. doi: 10.1371/journal.ppat.1002707. [PMID: 22615567]
  • Halla Krid, Aude Dorison, Amel Salhi, Lydie Cheval, Gilles Crambert. Expression profile of nuclear receptors along male mouse nephron segments reveals a link between ERRβ and thick ascending limb function. PloS one. 2012; 7(3):e34223. doi: 10.1371/journal.pone.0034223. [PMID: 22457827]
  • Gregory Papagregoriou, Kamil Erguler, Harsh Dweep, Konstantinos Voskarides, Panayiota Koupepidou, Yiannis Athanasiou, Alkis Pierides, Norbert Gretz, Kyriacos N Felekkis, Constantinos Deltas. A miR-1207-5p binding site polymorphism abolishes regulation of HBEGF and is associated with disease severity in CFHR5 nephropathy. PloS one. 2012; 7(2):e31021. doi: 10.1371/journal.pone.0031021. [PMID: 22319602]
  • Gonzalo Obal, Ana Lía Ramos, Valeria Silva, Analía Lima, Carlos Batthyany, María Inés Bessio, Fernando Ferreira, Gustavo Salinas, Ana María Ferreira. Characterisation of the native lipid moiety of Echinococcus granulosus antigen B. PLoS neglected tropical diseases. 2012; 6(5):e1642. doi: 10.1371/journal.pntd.0001642. [PMID: 22616019]
  • Hitomi Okada, Yuji Naito, Tomohisa Takagi, Megumi Takaoka, Tomoko Oya-Ito, Kohei Fukumoto, Kazuhiko Uchiyama, Osamu Handa, Satoshi Kokura, Yumiko Nagano, Hirofumi Matsui, Yoji Kato, Toshihiko Osawa, Toshikazu Yoshikawa. Detection of N-(hexanoyl)lysine in the tropomyosin 1 protein in N-methyl-N'-nitro-N-nitrosoguanidine-induced rat gastric cancer cells. Journal of clinical biochemistry and nutrition. 2012 Jan; 50(1):47-52. doi: 10.3164/jcbn.11-39. [PMID: 22247600]
  • Wei Deng, Xinan Wang, Jinfeng Xiao, Kuoju Chen, Heng Zhou, Difei Shen, Hongliang Li, Qizhu Tang. Loss of regulator of G protein signaling 5 exacerbates obesity, hepatic steatosis, inflammation and insulin resistance. PloS one. 2012; 7(1):e30256. doi: 10.1371/journal.pone.0030256. [PMID: 22272317]
  • Mariana H Massaoka, Alisson L Matsuo, Carlos R Figueiredo, Camyla F Farias, Natália Girola, Denise C Arruda, Jorge A B Scutti, Paulete Romoff, Oriana A Favero, Marcelo J P Ferreira, João H G Lago, Luiz R Travassos. Jacaranone induces apoptosis in melanoma cells via ROS-mediated downregulation of Akt and p38 MAPK activation and displays antitumor activity in vivo. PloS one. 2012; 7(6):e38698. doi: 10.1371/journal.pone.0038698. [PMID: 22701695]
  • Yi-Chen Lin, Han-Min Chen, I-Min Chou, An-Na Chen, Chia-Pei Chen, Guang-Huar Young, Chi-Tsai Lin, Chiung-Hsiang Cheng, Shih-Chung Chang, Rong-Huay Juang. Plastidial starch phosphorylase in sweet potato roots is proteolytically modified by protein-protein interaction with the 20S proteasome. PloS one. 2012; 7(4):e35336. doi: 10.1371/journal.pone.0035336. [PMID: 22506077]
  • Natalie V Obroucheva, Snezhana V Lityagina, Galina V Novikova, Irina A Sin'kevich. Vacuolar status and water relations in embryonic axes of recalcitrant Aesculus hippocastanum seeds during stratification and early germination. AoB PLANTS. 2012; 2012(?):pls008. doi: 10.1093/aobpla/pls008. [PMID: 22593822]
  • Ki-Won Lee, Joon-Yung Cha, Kyung-Hee Kim, Yong-Goo Kim, Byung-Hyun Lee, Sang-Hoon Lee. Overexpression of alfalfa mitochondrial HSP23 in prokaryotic and eukaryotic model systems confers enhanced tolerance to salinity and arsenic stress. Biotechnology letters. 2012 Jan; 34(1):167-74. doi: 10.1007/s10529-011-0750-1. [PMID: 22127759]
  • Helene C D Østerholt, Ingrid Dannevig, Myra H Wyckoff, Jie Liao, Yucel Akgul, Mrithyunjay Ramgopal, Dan S Mija, Naeun Cheong, Christopher Longoria, Mala Mahendroo, Britt Nakstad, Ola D Saugstad, Rashmin C Savani. Antioxidant protects against increases in low molecular weight hyaluronan and inflammation in asphyxiated newborn pigs resuscitated with 100\% oxygen. PloS one. 2012; 7(6):e38839. doi: 10.1371/journal.pone.0038839. [PMID: 22701723]
  • Yazmid Reyes-Dominguez, Stefan Boedi, Michael Sulyok, Gerlinde Wiesenberger, Norbert Stoppacher, Rudolf Krska, Joseph Strauss. Heterochromatin influences the secondary metabolite profile in the plant pathogen Fusarium graminearum. Fungal genetics and biology : FG & B. 2012 Jan; 49(1):39-47. doi: 10.1016/j.fgb.2011.11.002. [PMID: 22100541]
  • Alfonso Fernández-Álvarez, Miriam Marín-Menguiano, Daniel Lanver, Alberto Jiménez-Martín, Alberto Elías-Villalobos, Antonio J Pérez-Pulido, Regine Kahmann, José I Ibeas. Identification of O-mannosylated virulence factors in Ustilago maydis. PLoS pathogens. 2012; 8(3):e1002563. doi: 10.1371/journal.ppat.1002563. [PMID: 22416226]
  • Robert J Walker, Nancy M Anderson, Suleiman Bahouth, Jena J Steinle. Silencing of insulin receptor substrate-1 increases cell death in retinal Müller cells. Molecular vision. 2012; 18(?):271-9. doi: NULL. [PMID: 22328823]
  • Zhuo Chen, Mengjiao Zeng, Baoan Song, Chengrui Hou, Deyu Hu, Xiangyang Li, Zhenchao Wang, Huitao Fan, Liang Bi, Jiaju Liu, Dandan Yu, Linhong Jin, Song Yang. Dufulin activates HrBP1 to produce antiviral responses in tobacco. PloS one. 2012; 7(5):e37944. doi: 10.1371/journal.pone.0037944. [PMID: 22662252]
  • Maria Greco, Adriana Chiappetta, Leonardo Bruno, Maria Beatrice Bitonti. In Posidonia oceanica cadmium induces changes in DNA methylation and chromatin patterning. Journal of experimental botany. 2012 Jan; 63(2):695-709. doi: 10.1093/jxb/err313. [PMID: 22058406]
  • Noorhariza Mohd Zaki, Rajinder Singh, Rozana Rosli, Ismanizan Ismail. Elaeis oleifera genomic-SSR markers: exploitation in oil palm germplasm diversity and cross-amplification in arecaceae. International journal of molecular sciences. 2012; 13(4):4069-4088. doi: 10.3390/ijms13044069. [PMID: 22605966]
  • Marion Andrew, Reeta Barua, Steven M Short, Linda M Kohn. Evidence for a common toolbox based on necrotrophy in a fungal lineage spanning necrotrophs, biotrophs, endophytes, host generalists and specialists. PloS one. 2012; 7(1):e29943. doi: 10.1371/journal.pone.0029943. [PMID: 22253834]
  • Tatiana N Demidova-Rice, Lindsey Wolf, Jeffry Deckenback, Michael R Hamblin, Ira M Herman. Human platelet-rich plasma- and extracellular matrix-derived peptides promote impaired cutaneous wound healing in vivo. PloS one. 2012; 7(2):e32146. doi: 10.1371/journal.pone.0032146. [PMID: 22384158]
  • Lu-Ping Ren, Stanley M H Chan, Xiao-Yi Zeng, D Ross Laybutt, Tristan J Iseli, Ruo-Qiong Sun, Edward W Kraegen, Gregory J Cooney, Nigel Turner, Ji-Ming Ye. Differing endoplasmic reticulum stress response to excess lipogenesis versus lipid oversupply in relation to hepatic steatosis and insulin resistance. PloS one. 2012; 7(2):e30816. doi: 10.1371/journal.pone.0030816. [PMID: 22355328]
  • Martyna Nowacka, Paulina Jackowiak, Agnieszka Rybarczyk, Tomasz Magacz, Pawel M Strozycki, Jan Barciszewski, Marek Figlerowicz. 2D-PAGE as an effective method of RNA degradome analysis. Molecular biology reports. 2012 Jan; 39(1):139-46. doi: 10.1007/s11033-011-0718-1. [PMID: 21559842]
  • Andrea D Olmstead, Wolfgang Knecht, Ina Lazarov, Surjit B Dixit, François Jean. Human subtilase SKI-1/S1P is a master regulator of the HCV Lifecycle and a potential host cell target for developing indirect-acting antiviral agents. PLoS pathogens. 2012 Jan; 8(1):e1002468. doi: 10.1371/journal.ppat.1002468. [PMID: 22241994]
  • Kazunori Takahashi, Hiroki Mizukami, Kosuke Kamata, Wataru Inaba, Noriaki Kato, Chihiro Hibi, Soroku Yagihashi. Amelioration of acute kidney injury in lipopolysaccharide-induced systemic inflammatory response syndrome by an aldose reductase inhibitor, fidarestat. PloS one. 2012; 7(1):e30134. doi: 10.1371/journal.pone.0030134. [PMID: 22253906]
  • Aristidis S Veskoukis, Antonios Kyparos, Michalis G Nikolaidis, Dimitrios Stagos, Nektarios Aligiannis, Maria Halabalaki, Konstantinos Chronis, Nikolaos Goutzourelas, Leandros Skaltsounis, Dimitrios Kouretas. The antioxidant effects of a polyphenol-rich grape pomace extract in vitro do not correspond in vivo using exercise as an oxidant stimulus. Oxidative medicine and cellular longevity. 2012; 2012(?):185867. doi: 10.1155/2012/185867. [PMID: 22693650]
  • Young-Man Kim, Sung-Eun Lee, Byeoung-Soo Park, Mi-Kyung Son, Young-Mi Jung, Seung-Ok Yang, Hyung-Kyoon Choi, Sung-Ho Hur, Jong Hwa Yum. Proteomic analysis on acetate metabolism in Citrobacter sp. BL-4. International journal of biological sciences. 2012; 8(1):66-78. doi: 10.7150/ijbs.8.66. [PMID: 22211106]
  • Ignacio Cota, Anne Béatrice Blanc-Potard, Josep Casadesús. STM2209-STM2208 (opvAB): a phase variation locus of Salmonella enterica involved in control of O-antigen chain length. PloS one. 2012; 7(5):e36863. doi: 10.1371/journal.pone.0036863. [PMID: 22606300]
  • Claudia Sticozzi, Giuseppe Belmonte, Alessandra Pecorelli, Beatrice Arezzini, Concetta Gardi, Emanuela Maioli, Clelia Miracco, Marzia Toscano, Henry Jay Forman, Giuseppe Valacchi. Cigarette smoke affects keratinocytes SRB1 expression and localization via H2O2 production and HNE protein adducts formation. PloS one. 2012; 7(3):e33592. doi: 10.1371/journal.pone.0033592. [PMID: 22442701]
  • Nthato Chirwa, Dhirendra Govender, Bongani Ndimba, Zoe Lotz, Marilyn Tyler, Eugenio Panieri, Delawir Kahn, Anwar S Mall. A 40-50kDa Glycoprotein Associated with Mucus is Identified as α-1-Acid Glycoprotein in Carcinoma of the Stomach. Journal of Cancer. 2012; 3(?):83-92. doi: 10.7150/jca.3737. [PMID: 22359529]
  • Elisa Bellei, Aurora Cuoghi, Emanuela Monari, Stefania Bergamini, Luca Isaia Fantoni, Maurizio Zappaterra, Simona Guerzoni, Annalisa Bazzocchi, Aldo Tomasi, Luigi Alberto Pini. Proteomic analysis of urine in medication-overuse headache patients: possible relation with renal damages. The journal of headache and pain. 2012 Jan; 13(1):45-52. doi: 10.1007/s10194-011-0390-9. [PMID: 21997203]
  • Fatemeh Talaei, Martina Schmidt, Robert H Henning. Induction of VMAT-1 and TPH-1 expression induces vesicular accumulation of serotonin and protects cells and tissue from cooling/rewarming injury. PloS one. 2012; 7(1):e30400. doi: 10.1371/journal.pone.0030400. [PMID: 22253933]
  • Piyada Juntawong, Julia Bailey-Serres. Dynamic Light Regulation of Translation Status in Arabidopsis thaliana. Frontiers in plant science. 2012; 3(?):66. doi: 10.3389/fpls.2012.00066. [PMID: 22645595]
  • Casper Søgaard, Anne Stenbæk, Sophie Bernard, Masood Hadi, Azeddine Driouich, Henrik Vibe Scheller, Yumiko Sakuragi. GO-PROMTO illuminates protein membrane topologies of glycan biosynthetic enzymes in the Golgi apparatus of living tissues. PloS one. 2012; 7(2):e31324. doi: 10.1371/journal.pone.0031324. [PMID: 22363620]
  • Ying Wang, Cheng-Hua He, Hao Zheng, Hai-Bin Zhang. Characterization and comparison of Fumonisin B(1)-protein conjugates by six methods. International journal of molecular sciences. 2012; 13(1):84-96. doi: 10.3390/ijms13010084. [PMID: 22312240]
  • Fernanda M Cerqueira, Laura I Brandizzi, Fernanda M Cunha, Francisco R M Laurindo, Alicia J Kowaltowski. Serum from calorie-restricted rats activates vascular cell eNOS through enhanced insulin signaling mediated by adiponectin. PloS one. 2012; 7(2):e31155. doi: 10.1371/journal.pone.0031155. [PMID: 22319612]
  • Ding-Bang Chen, Li Feng, Xiao-Pu Lin, Wei Zhang, Fu-Rong Li, Xiu-Ling Liang, Xun-Hua Li. Penicillamine increases free copper and enhances oxidative stress in the brain of toxic milk mice. PloS one. 2012; 7(5):e37709. doi: 10.1371/journal.pone.0037709. [PMID: 22629446]
  • Sishuo Cao, Wentao Xu, Nan Zhang, Yan Wang, YunBo Luo, Xiaoyun He, Kunlun Huang. A mitochondria-dependent pathway mediates the apoptosis of GSE-induced yeast. PloS one. 2012; 7(3):e32943. doi: 10.1371/journal.pone.0032943. [PMID: 22403727]
  • Yi-Chang Liu, I-Hsuan Lin, Wei-Jen Chung, Wensi S Hu, Wailap Victor Ng, Chi-Yu Lu, Tsung-Yen Huang, Hung-Wei Shu, Kwang-Jen Hsiao, Shih-Feng Tsai, Chuan-Hsiung Chang, Chao-Hsiung Lin. Proteomics characterization of cytoplasmic and lipid-associated membrane proteins of human pathogen Mycoplasma fermentans M64. PloS one. 2012; 7(4):e35304. doi: 10.1371/journal.pone.0035304. [PMID: 22536369]
  • Sayuri Suzuki, Hirotaka Fukasawa, Taro Misaki, Akashi Togawa, Naro Ohashi, Kyoko Kitagawa, Yojiro Kotake, Ning Liu, Hiroyuki Niida, Keiko Nakayama, Keiichi I Nakayama, Tatsuo Yamamoto, Masatoshi Kitagawa. The amelioration of renal damage in Skp2-deficient mice canceled by p27 Kip1 deficiency in Skp2-/- p27-/- mice. PloS one. 2012; 7(4):e36249. doi: 10.1371/journal.pone.0036249. [PMID: 22558406]
  • Fang Peng, Xianquan Zhan, Mao-Yu Li, Fan Fang, Guoqing Li, Cui Li, Peng-Fei Zhang, Zhuchu Chen. Proteomic and bioinformatics analyses of mouse liver microsomes. International journal of proteomics. 2012; 2012(?):832569. doi: 10.1155/2012/832569. [PMID: 22500222]
  • Shane A Liddelow, Sally Temple, Kjeld Møllgård, Renate Gehwolf, Andrea Wagner, Hannelore Bauer, Hans-Christian Bauer, Timothy N Phoenix, Katarzyna M Dziegielewska, Norman R Saunders. Molecular characterisation of transport mechanisms at the developing mouse blood-CSF interface: a transcriptome approach. PloS one. 2012; 7(3):e33554. doi: 10.1371/journal.pone.0033554. [PMID: 22457777]
  • Yoshiyuki Yamada, Gino V Limmon, Dahai Zheng, Na Li, Liang Li, Lu Yin, Vincent T K Chow, Jianzhu Chen, Bevin P Engelward. Major shifts in the spatio-temporal distribution of lung antioxidant enzymes during influenza pneumonia. PloS one. 2012; 7(2):e31494. doi: 10.1371/journal.pone.0031494. [PMID: 22355371]
  • Saskia Floerl, Andrzej Majcherczyk, Mareike Possienke, Kirstin Feussner, Hella Tappe, Christiane Gatz, Ivo Feussner, Ursula Kües, Andrea Polle. Verticillium longisporum infection affects the leaf apoplastic proteome, metabolome, and cell wall properties in Arabidopsis thaliana. PloS one. 2012; 7(2):e31435. doi: 10.1371/journal.pone.0031435. [PMID: 22363647]
  • Shona Pryor, Gretchen McCaffrey, Lindsay R Young, Mark L Grimes. NGF causes TrkA to specifically attract microtubules to lipid rafts. PloS one. 2012; 7(4):e35163. doi: 10.1371/journal.pone.0035163. [PMID: 22496904]
  • William R Lagor, David W Fields, Sumeet A Khetarpal, Arthi Kumaravel, Wen Lin, Nathaniel Weintraub, Kaijin Wu, Sarah F Hamm-Alvarez, Denise Drazul-Schrader, Margarita de la Llera-Moya, George H Rothblat, Daniel J Rader. The effects of apolipoprotein F deficiency on high density lipoprotein cholesterol metabolism in mice. PloS one. 2012; 7(2):e31616. doi: 10.1371/journal.pone.0031616. [PMID: 22363685]
  • Pramod Kumar Kushawaha, Reema Gupta, Chandra Dev Pati Tripathi, Shyam Sundar, Anuradha Dube. Evaluation of Leishmania donovani protein disulfide isomerase as a potential immunogenic protein/vaccine candidate against visceral Leishmaniasis. PloS one. 2012; 7(4):e35670. doi: 10.1371/journal.pone.0035670. [PMID: 22539989]
  • Verena K Hehle, Matthew J Paul, Pascal M Drake, Julian K C Ma, Craig J van Dolleweerd. Antibody degradation in tobacco plants: a predominantly apoplastic process. BMC biotechnology. 2011 Dec; 11(?):128. doi: 10.1186/1472-6750-11-128. [PMID: 22208820]
  • Yan O Zubo, Victor V Kusnetsov, Thomas Börner, Karsten Liere. Reverse protection assay: a tool to analyze transcriptional rates from individual promoters. Plant methods. 2011 Dec; 7(1):47. doi: 10.1186/1746-4811-7-47. [PMID: 22185205]
  • Yosra Ayed, Manel Boussabbeh, Wiem Zakhama, Chayma Bouaziz, Salwa Abid, Hassen Bacha. Induction of cytotoxicity of Pelagia noctiluca venom causes reactive oxygen species generation, lipid peroxydation induction and DNA damage in human colon cancer cells. Lipids in health and disease. 2011 Dec; 10(?):232. doi: 10.1186/1476-511x-10-232. [PMID: 22151830]
  • Paula Vainio, Laura Lehtinen, Tuomas Mirtti, Mika Hilvo, Tuulikki Seppänen-Laakso, Johannes Virtanen, Anna Sankila, Stig Nordling, Johan Lundin, Antti Rannikko, Matej Orešič, Olli Kallioniemi, Kristiina Iljin. Phospholipase PLA2G7, associated with aggressive prostate cancer, promotes prostate cancer cell migration and invasion and is inhibited by statins. Oncotarget. 2011 Dec; 2(12):1176-90. doi: 10.18632/oncotarget.397. [PMID: 22202492]
  • C-G Chu, C T Tan, G-T Yu, S Zhong, S S Xu, L Yan. A Novel Retrotransposon Inserted in the Dominant Vrn-B1 Allele Confers Spring Growth Habit in Tetraploid Wheat (Triticum turgidum L.). G3 (Bethesda, Md.). 2011 Dec; 1(7):637-45. doi: 10.1534/g3.111.001131. [PMID: 22384375]
  • Bao Lige, Julia D Romano, Veera Venkata Ratnam Bandaru, Karen Ehrenman, Jelena Levitskaya, Vera Sampels, Norman J Haughey, Isabelle Coppens. Deficiency of a Niemann-Pick, type C1-related protein in toxoplasma is associated with multiple lipidoses and increased pathogenicity. PLoS pathogens. 2011 Dec; 7(12):e1002410. doi: 10.1371/journal.ppat.1002410. [PMID: 22174676]
  • Gulay Ciftci, Gul Fatma Yarim. Evaluation of IGF-I levels and serum protein profiles of diabetic cats and dogs. Journal of veterinary science. 2011 Dec; 12(4):325-31. doi: 10.4142/jvs.2011.12.4.325. [PMID: 22122898]
  • Josirley de F C Carvalho, Pippa J Madgwick, Stephen J Powers, Alfred J Keys, Peter J Lea, Martin A J Parry. An engineered pathway for glyoxylate metabolism in tobacco plants aimed to avoid the release of ammonia in photorespiration. BMC biotechnology. 2011 Nov; 11(?):111. doi: 10.1186/1472-6750-11-111. [PMID: 22104170]
  • Matthew W Woods, Jenna N Kelly, Clayton J Hattlmann, Jessica G K Tong, Li S Xu, Macon D Coleman, Graeme R Quest, James R Smiley, Stephen D Barr. Human HERC5 restricts an early stage of HIV-1 assembly by a mechanism correlating with the ISGylation of Gag. Retrovirology. 2011 Nov; 8(?):95. doi: 10.1186/1742-4690-8-95. [PMID: 22093708]
  • Chao Tan, Hui Wang, Yue Zhang, Bin Qi, Guoxin Xu, Huiqiong Zheng. A proteomic approach to analyzing responses of Arabidopsis thaliana root cells to different gravitational conditions using an agravitropic mutant, pin2 and its wild type. Proteome science. 2011 Nov; 9(?):72. doi: 10.1186/1477-5956-9-72. [PMID: 22085406]
  • Hazir Rahman, Muhammad Qasim, Frank C Schultze, Michael Oellerich, Abdul R Asif. Fetal calf serum heat inactivation and lipopolysaccharide contamination influence the human T lymphoblast proteome and phosphoproteome. Proteome science. 2011 Nov; 9(1):71. doi: 10.1186/1477-5956-9-71. [PMID: 22085958]
  • Claudia Landi, Elena Bargagli, Barbara Magi, Antje Prasse, Joachim Muller-Quernheim, Luca Bini, Paola Rottoli. Proteome analysis of bronchoalveolar lavage in pulmonary langerhans cell histiocytosis. Journal of clinical bioinformatics. 2011 Nov; 1(?):31. doi: 10.1186/2043-9113-1-31. [PMID: 22074767]
  • Iciar Gárate, Borja García-Bueno, José L M Madrigal, Lidia Bravo, Esther Berrocoso, Javier R Caso, Juan A Micó, Juan C Leza. Origin and consequences of brain Toll-like receptor 4 pathway stimulation in an experimental model of depression. Journal of neuroinflammation. 2011 Nov; 8(?):151. doi: 10.1186/1742-2094-8-151. [PMID: 22053929]
  • Emily B Merewitz, Thomas Gianfagna, Bingru Huang. Protein accumulation in leaves and roots associated with improved drought tolerance in creeping bentgrass expressing an ipt gene for cytokinin synthesis. Journal of experimental botany. 2011 Nov; 62(15):5311-33. doi: 10.1093/jxb/err166. [PMID: 21831843]
  • Cynthia Wei-Sheng Lee, Jia-Ying Yan, Yao-Chang Chiang, Tsai-Wei Hung, Hung-Li Wang, Lih-Chu Chiou, Ing-Kang Ho. Differential pharmacological actions of methadone and buprenorphine in human embryonic kidney 293 cells coexpressing human μ-opioid and opioid receptor-like 1 receptors. Neurochemical research. 2011 Nov; 36(11):2008-21. doi: 10.1007/s11064-011-0525-z. [PMID: 21671107]
  • Carlos Trujillo-Moya, Carmina Gisbert, Santiago Vilanova, Fernando Nuez. Localization of QTLs for in vitro plant regeneration in tomato. BMC plant biology. 2011 Oct; 11(?):140. doi: 10.1186/1471-2229-11-140. [PMID: 22014149]
  • Marco A S Kadowaki, Marcelo Müller-Santos, Fabiane G M Rego, Emanuel M Souza, Marshall G Yates, Rose A Monteiro, Fabio O Pedrosa, Leda S Chubatsu, Maria B R Steffens. Identification and characterization of PhbF: a DNA binding protein with regulatory role in the PHB metabolism of Herbaspirillum seropedicae SmR1. BMC microbiology. 2011 Oct; 11(?):230. doi: 10.1186/1471-2180-11-230. [PMID: 21999748]
  • Li Tian, Samuel Sm Sun. Ubiquitin fusion expression and tissue-dependent targeting of hG-CSF in transgenic tobacco. BMC biotechnology. 2011 Oct; 11(?):91. doi: 10.1186/1472-6750-11-91. [PMID: 21985646]
  • Juan Elías Olivares, Claudia Díaz-Camino, Georgina Estrada-Navarrete, Xochitl Alvarado-Affantranger, Margarita Rodríguez-Kessler, Fernando Z Zamudio, Timoteo Olamendi-Portugal, Yamile Márquez, Luis Eduardo Servín, Federico Sánchez. Nodulin 41, a novel late nodulin of common bean with peptidase activity. BMC plant biology. 2011 Oct; 11(?):134. doi: 10.1186/1471-2229-11-134. [PMID: 21985276]
  • Molly McAdow, Hwan Keun Kim, Andrea C Dedent, Antoni P A Hendrickx, Olaf Schneewind, Dominique M Missiakas. Preventing Staphylococcus aureus sepsis through the inhibition of its agglutination in blood. PLoS pathogens. 2011 Oct; 7(10):e1002307. doi: 10.1371/journal.ppat.1002307. [PMID: 22028651]
  • Magdalena Migocka, Anna Papierniak, Ewelina Kosatka, Grazyna Klobus. Comparative study of the active cadmium efflux systems operating at the plasma membrane and tonoplast of cucumber root cells. Journal of experimental botany. 2011 Oct; 62(14):4903-16. doi: 10.1093/jxb/err180. [PMID: 21705389]
  • Mariana S Silva, Alessandra A De Souza, Marco A Takita, Carlos A Labate, Marcos A Machado. Analysis of the biofilm proteome of Xylella fastidiosa. Proteome science. 2011 Sep; 9(?):58. doi: 10.1186/1477-5956-9-58. [PMID: 21939513]