Queuine (BioDeep_00001868931)

Main id: BioDeep_00000004692

 


代谢物信息卡片


Queuine

化学式: C12H15N5O3 (277.1175)
中文名称:
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C1=CC(C(C1NCC2=CNC3=C2C(=O)NC(=N3)N)O)O
InChI: InChI=1S/C12H15N5O3/c13-12-16-10-8(11(20)17-12)5(4-15-10)3-14-6-1-2-7(18)9(6)19/h1-2,4,6-7,9,14,18-19H,3H2,(H4,13,15,16,17,20)/t6-,7-,9+/m0/s1

描述信息

同义名列表

2 个代谢物同义名

Queuine; Queuine



数据库引用编号

12 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(3)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 6 CTNNB1, HPGDS, MYC, QTRT1, QTRT2, YARS1
Peripheral membrane protein 3 ACHE, QTRT1, QTRT2
Endosome membrane 1 BACE1
Mitochondrion membrane 1 MAOA
Nucleus 6 ACHE, CTNNB1, FOS, MYC, QTRT1, YARS1
cytosol 6 CTNNB1, FOS, HPGDS, MAOA, PRKCQ, YARS1
dendrite 1 BACE1
nuclear body 1 YARS1
trans-Golgi network 1 BACE1
centrosome 1 CTNNB1
nucleoplasm 4 CTNNB1, FOS, HPGDS, MYC
RNA polymerase II transcription regulator complex 1 FOS
Cell membrane 5 ACHE, BACE1, CLDN2, CLDN5, CTNNB1
Cytoplasmic side 3 MAOA, QTRT1, QTRT2
lamellipodium 1 CTNNB1
Cell projection, axon 1 BACE1
Multi-pass membrane protein 2 CLDN2, CLDN5
Synapse 3 ACHE, CTNNB1, SYN3
cell cortex 1 CTNNB1
cell junction 2 CLDN5, CTNNB1
cell surface 2 ACHE, BACE1
glutamatergic synapse 2 CTNNB1, SYN3
Golgi apparatus 2 ACHE, BACE1
lysosomal membrane 1 EGF
neuromuscular junction 1 ACHE
neuronal cell body 1 BACE1
presynaptic membrane 1 CTNNB1
synaptic vesicle 2 BACE1, SYN3
Lysosome 1 BACE1
endosome 1 BACE1
plasma membrane 8 ACHE, BACE1, CLDN2, CLDN5, CTNNB1, EGF, IFNLR1, PRKCQ
synaptic vesicle membrane 1 SYN3
Membrane 8 ACHE, BACE1, CLDN5, CTNNB1, EGF, IFNLR1, MAOA, MYC
axon 1 BACE1
basolateral plasma membrane 1 CTNNB1
extracellular exosome 2 CTNNB1, EGF
endoplasmic reticulum 2 BACE1, FOS
extracellular space 4 ACHE, EGF, IL10, YARS1
perinuclear region of cytoplasm 2 ACHE, CTNNB1
Schaffer collateral - CA1 synapse 1 CTNNB1
Cell junction, tight junction 2 CLDN2, CLDN5
adherens junction 1 CTNNB1
apicolateral plasma membrane 2 CLDN5, CTNNB1
bicellular tight junction 3 CLDN2, CLDN5, CTNNB1
mitochondrion 4 DLAT, MAOA, QTRT1, QTRT2
protein-containing complex 2 CTNNB1, MYC
intracellular membrane-bounded organelle 2 DLAT, HPGDS
postsynaptic density 1 SYN3
Single-pass type I membrane protein 2 BACE1, IFNLR1
Secreted 2 ACHE, IL10
extracellular region 3 ACHE, EGF, IL10
Mitochondrion outer membrane 3 MAOA, QTRT1, QTRT2
Single-pass membrane protein 1 MAOA
mitochondrial outer membrane 3 MAOA, QTRT1, QTRT2
hippocampal mossy fiber to CA3 synapse 1 BACE1
Mitochondrion matrix 1 DLAT
mitochondrial matrix 1 DLAT
Extracellular side 1 ACHE
transcription regulator complex 1 CTNNB1
centriolar satellite 1 PRKCQ
multivesicular body 1 BACE1
Z disc 1 CTNNB1
beta-catenin destruction complex 1 CTNNB1
nucleolus 1 MYC
Wnt signalosome 1 CTNNB1
Early endosome 1 BACE1
apical part of cell 1 CTNNB1
cell-cell junction 3 CLDN2, CLDN5, CTNNB1
recycling endosome 1 BACE1
postsynaptic membrane 1 CTNNB1
Membrane raft 1 BACE1
Cytoplasm, cytoskeleton 1 CTNNB1
focal adhesion 1 CTNNB1
Cell junction, adherens junction 1 CTNNB1
flotillin complex 1 CTNNB1
basement membrane 1 ACHE
fascia adherens 1 CTNNB1
lateral plasma membrane 2 CLDN5, CTNNB1
Late endosome 1 BACE1
chromatin 2 FOS, MYC
cell periphery 1 CTNNB1
Cytoplasm, cytoskeleton, cilium basal body 1 CTNNB1
Golgi apparatus, trans-Golgi network 1 BACE1
Nucleus, nucleolus 1 MYC
spindle pole 1 CTNNB1
postsynaptic density, intracellular component 1 CTNNB1
Lipid-anchor, GPI-anchor 1 ACHE
microvillus membrane 1 CTNNB1
nuclear envelope 1 MYC
Endomembrane system 2 BACE1, CTNNB1
Cytoplasmic vesicle membrane 1 BACE1
Nucleus, nucleoplasm 1 MYC
Cell projection, dendrite 1 BACE1
euchromatin 1 CTNNB1
side of membrane 1 ACHE
endoplasmic reticulum lumen 1 BACE1
nuclear matrix 1 FOS
platelet alpha granule lumen 1 EGF
pyruvate dehydrogenase complex 1 DLAT
extrinsic component of synaptic vesicle membrane 1 SYN3
RNA polymerase II transcription repressor complex 1 MYC
paranode region of axon 1 CLDN5
Schmidt-Lanterman incisure 1 CLDN5
tight junction 2 CLDN2, CLDN5
beta-catenin-TCF complex 1 CTNNB1
immunological synapse 1 PRKCQ
aggresome 1 PRKCQ
Single-pass type IV membrane protein 1 MAOA
presynaptic active zone cytoplasmic component 1 CTNNB1
clathrin-coated endocytic vesicle membrane 1 EGF
synaptic cleft 1 ACHE
protein-DNA complex 2 CTNNB1, FOS
Rough endoplasmic reticulum 1 MYC
catenin complex 1 CTNNB1
transferase complex 2 QTRT1, QTRT2
transcription factor AP-1 complex 1 FOS
Myc-Max complex 1 MYC
beta-catenin-TCF7L2 complex 1 CTNNB1
[Isoform H]: Cell membrane 1 ACHE
cytoplasmic side of mitochondrial outer membrane 1 QTRT1
beta-catenin-ICAT complex 1 CTNNB1
Scrib-APC-beta-catenin complex 1 CTNNB1
Golgi-associated vesicle lumen 1 BACE1
interleukin-28 receptor complex 1 IFNLR1
tRNA-guanine transglycosylase complex 2 QTRT1, QTRT2
nucleoplasmic reticulum 1 MYC


文献列表

  • Patricia Richard, Lucie Kozlowski, Hélène Guillorit, Patrice Garnier, Nicole C McKnight, Antoine Danchin, Xavier Manière. Queuine, a bacterial-derived hypermodified nucleobase, shows protection in in vitro models of neurodegeneration. PloS one. 2021; 16(8):e0253216. doi: 10.1371/journal.pone.0253216. [PMID: 34379627]
  • Bruce N Ames. Prolonging healthy aging: Longevity vitamins and proteins. Proceedings of the National Academy of Sciences of the United States of America. 2018 10; 115(43):10836-10844. doi: 10.1073/pnas.1809045115. [PMID: 30322941]
  • Claire Fergus, Dominic Barnes, Mashael A Alqasem, Vincent P Kelly. The queuine micronutrient: charting a course from microbe to man. Nutrients. 2015 Apr; 7(4):2897-929. doi: 10.3390/nu7042897. [PMID: 25884661]
  • Tatsiana Rakovich, Coilin Boland, Ilana Bernstein, Vimbai M Chikwana, Dirk Iwata-Reuyl, Vincent P Kelly. Queuosine deficiency in eukaryotes compromises tyrosine production through increased tetrahydrobiopterin oxidation. The Journal of biological chemistry. 2011 Jun; 286(22):19354-63. doi: 10.1074/jbc.m111.219576. [PMID: 21487017]
  • C Pathak, Manjula Vinayak. Modulation of lactate dehydrogenase isozymes by modified base queuine. Molecular biology reports. 2005 Sep; 32(3):191-6. doi: 10.1007/s11033-004-6941-2. [PMID: 16172920]
  • W Langgut, T Reisser. Involvement of protein kinase C in the control of tRNA modification with queuine in HeLa cells. Nucleic acids research. 1995 Jul; 23(13):2488-91. doi: 10.1093/nar/23.13.2488. [PMID: 7630726]
  • T Reisser, W Langgut, H Kersten. The nutrient factor queuine protects HeLa cells from hypoxic stress and improves metabolic adaptation to oxygen availability. European journal of biochemistry. 1994 May; 221(3):979-86. doi: 10.1111/j.1432-1033.1994.tb18814.x. [PMID: 8181481]
  • T Reisser, A Eicher, W Langgut. Mitogenic stimulation of HeLa cells increases the activity of the anoxic stress protein, LDH 6/k: suppression by queuine. Biochemical and biophysical research communications. 1993 Dec; 197(3):1319-25. doi: 10.1006/bbrc.1993.2621. [PMID: 8280149]
  • W Langgut, T Reisser, H Kersten. Queuine modulates growth of HeLa cells depending on oxygen availability. BioFactors (Oxford, England). 1990 Oct; 2(4):245-9. doi: NULL. [PMID: 2282142]
  • L Szabo, S Nishimura, W R Farkas. Possible involvement of queuine in oxidative metabolism. BioFactors (Oxford, England). 1988 Oct; 1(3):241-4. doi: . [PMID: 3256323]
  • Y Kuchino, Y Kimura, H Akimoto, H Nomura, N Kamei, S Nishimura. Monoclonal antibodies to queuine. Nucleic acids symposium series. 1985; ?(16):221-3. doi: . [PMID: 4088873]
  • U Gündüz, J R Katze. Queuine salvage in mammalian cells. Evidence that queuine is generated from queuosine 5'-phosphate. The Journal of biological chemistry. 1984 Jan; 259(2):1110-3. doi: 10.1016/s0021-9258(17)43573-3. [PMID: 6319378]
  • Y Kuchino, M Matsumoto, M Hosoda, H Hoshino, S Nishimura. Effect of queuine on protein biosynthesis in mammalian cells. Nucleic acids symposium series. 1984; ?(15):29-32. doi: . [PMID: 6097883]
  • J R Katze, W T Beck, C S Cheng, J A McCloskey. Why is tumor tRNA hypomodified with respect to Q nucleoside?. Recent results in cancer research. Fortschritte der Krebsforschung. Progres dans les recherches sur le cancer. 1983; 84(?):146-59. doi: 10.1007/978-3-642-81947-6_10. [PMID: 6405458]
  • J R Katze, B Basile, J A McCloskey. Queuine, a modified base incorporated posttranscriptionally into eukaryotic transfer RNA: wide distribution in nature. Science (New York, N.Y.). 1982 Apr; 216(4541):55-6. doi: 10.1126/science.7063869. [PMID: 7063869]