trans-beta-Farnesene (BioDeep_00000001010)

Main id: BioDeep_00000019564

 

human metabolite PANOMIX_OTCML-2023 Endogenous


代谢物信息卡片


TRANS-.BETA.-FARNESENE (CONSTITUENT OF CHAMOMILE) [DSC]

化学式: C15H24 (204.1878)
中文名称: trans-β-Farnesene, β-法呢烯
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C=CC(=C)CC/C=C(\C)/CC/C=C(\C)/C
InChI: InChI=1S/C15H24/c1-6-14(4)10-8-12-15(5)11-7-9-13(2)3/h6,9,12H,1,4,7-8,10-11H2,2-3,5H3/b15-12+

描述信息

Trans-beta-farnesene is a beta-farnesene in which the double bond at position 6-7 has E configuration. It is the major or sole alarm pheromone in most species of aphid. It has a role as an alarm pheromone and a metabolite.
beta-Farnesene is a natural product found in Nepeta nepetella, Eupatorium capillifolium, and other organisms with data available.
trans-beta-Farnesene, also known as (E)-β-Farnesene or (E)-7,11-Dimethyl-3-methylenedodeca-1,6,10-triene, is classified as a member of the Sesquiterpenoids. Sesquiterpenoids are terpenes with three consecutive isoprene units. trans-beta-Farnesene is a hydrocarbon lipid molecule.
(E)-β-Farnesene (trans-β-Farnesene) is a volatile sesquiterpene hydrocarbon which can be found in Phlomis aurea Decne essential oil. (E)-β-Farnesene can be used as a feeding stimulant for the sand fly Lutzomyia longipalpis[1][2].
(E)-β-Farnesene (trans-β-Farnesene) is a volatile sesquiterpene hydrocarbon which can be found in Phlomis aurea Decne essential oil. (E)-β-Farnesene can be used as a feeding stimulant for the sand fly Lutzomyia longipalpis[1][2].

同义名列表

51 个代谢物同义名

TRANS-.BETA.-FARNESENE (CONSTITUENT OF CHAMOMILE) [DSC]; 1,6,10-Dodecatriene, 7,11-dimethyl-3-methylene-, (6E)-; 1,6,10-Dodecatriene, 7,11-dimethyl-3-methylene-, (E)-; (6E)-7,11-dimethyl-3-methylidenedodeca-1,6,10-triene; (6E)-7,11-dimethyl-3-methylene-dodeca-1,6,10-triene; trans-7,11-Dimethyl-3-methylene-1,6,10-dodecatriene; (E)-7,11-dimethyl-3-methylene-dodeca-1,6,10-triene; (6E)-7,11-dimethyl-3-methylenedodeca-1,6,10-triene; (6E)-7,11-Dimethyl-3-methylene-1,6,10-dodecatriene; (E)-7,11-Dimethyl-3-methylenedodeca-1,6,10-triene; (E)-7,11-DIMETHYL-3-METHYLENE-1,6,10-DODECATRIENE; 1,6,10-Dodecatriene, 7,11-dimethyl-3-methylene-; 7,11-Dimethyl-3-methylene-1,6E,10-dodecatriene; 7,11-Dimethyl-3-methylene-1,6,10-dodecatriene; 7,11-Dimethyl-3-methylenedodeca-1,6,10-triene; trans-beta-Farnesene, analytical standard; JSNRRGGBADWTMC-UHFFFAOYSA-N; .BETA.-FARNESENE, (6E)-; (Z,E)-.beta.-Farnesene; TRANS-.BETA.-FARNESENE; FARNESENE, TRANS-BETA-; trans- beta -Farnesene; .BETA.-FARNESENE [MI]; beta-trans-farnesene; trans-beta-Farnesene; (E)-.beta.-Farnesene; (6E)-beta-farnesene; FARNESENE, .BETA.-; (E)-beta-farnesene; trans-β-Farnesene; b-trans-Farnesene; (E)-beta-Famesene; Β-trans-farnesene; trans-B-farnesene; (E)-|A-Farnesene; .beta.-Farnesene; E-beta-farnesene; trans--Farnesene; (E)-β-Farnesene; (e)-b-Farnesene; UNII-E5STW643HU; I(2)-farnesene; beta-Farnesene; Tox21_303792; b-farnesene; Β-farnesene; E5STW643HU; β-Farnesene; beta-Farnesene; beta-Farnesene; beta-Farnesene



数据库引用编号

20 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(0)

代谢反应

56 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(2)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(53)

COVID-19 Disease Map(0)

PathBank(1)

PharmGKB(0)

165 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 8 ACE, ACLY, CAT, ELANE, FDPS, GGPS1, PIK3CA, TXN
Peripheral membrane protein 2 ACHE, PLIN2
Endosome membrane 1 INSR
Nucleus 5 ACHE, EBF1, KDR, PLIN2, TXN
cytosol 10 ACLY, BAK1, CAT, ELANE, FDPS, GGPS1, LIPE, PIK3CA, PLIN2, TXN
phagocytic vesicle 1 ELANE
nucleoplasm 4 ACLY, FDPS, GGPS1, TXN
Cell membrane 5 ACE, ACHE, INSR, KDR, LIPE
lamellipodium 1 PIK3CA
Multi-pass membrane protein 1 TMEM245
Synapse 1 ACHE
cell junction 1 KDR
cell surface 2 ACHE, ELANE
Golgi apparatus 3 ACHE, ATRN, KDR
Golgi membrane 1 INS
neuromuscular junction 1 ACHE
Cytoplasm, cytosol 3 ACLY, LIPE, PTER
Lysosome 2 ACE, INSR
endosome 2 ACE, KDR
plasma membrane 8 ACE, ACHE, ATRN, BCHE, INSR, KDR, PIK3CA, PLIN2
Membrane 10 ACE, ACHE, ACLY, BAK1, CAT, FDPS, INSR, LIPE, PLIN2, TMEM245
axon 1 INSR
caveola 2 INSR, LIPE
extracellular exosome 8 ACE, ACLY, ATRN, CAT, ELANE, INSR, PTER, TXN
endoplasmic reticulum 3 BAK1, KDR, PLIN2
extracellular space 6 ACE, ACHE, ATRN, BCHE, ELANE, INS
perinuclear region of cytoplasm 3 ACHE, GGPS1, PIK3CA
intercalated disc 1 PIK3CA
mitochondrion 2 BAK1, CAT
protein-containing complex 1 CAT
intracellular membrane-bounded organelle 1 CAT
Single-pass type I membrane protein 3 ACE, ATRN, INSR
Secreted 5 ACE, ACHE, BCHE, INS, TXN
extracellular region 10 ACE, ACHE, ACLY, BCHE, CAT, ELANE, INS, KDR, PLIN2, TXN
Mitochondrion outer membrane 1 BAK1
Single-pass membrane protein 1 BAK1
mitochondrial outer membrane 1 BAK1
neuronal cell body membrane 1 INSR
[Isoform 2]: Secreted 2 ATRN, KDR
mitochondrial matrix 2 CAT, FDPS
Extracellular side 1 ACHE
anchoring junction 1 KDR
BAK complex 1 BAK1
Bcl-2 family protein complex 1 BAK1
external side of plasma membrane 3 ACE, INSR, KDR
Z disc 1 GGPS1
Early endosome 1 KDR
Cytoplasm, perinuclear region 1 GGPS1
Membrane raft 1 KDR
pore complex 1 BAK1
focal adhesion 1 CAT
Peroxisome 2 CAT, FDPS
basement membrane 1 ACHE
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
collagen-containing extracellular matrix 1 ELANE
secretory granule 1 ELANE
Late endosome 1 INSR
receptor complex 2 INSR, KDR
chromatin 1 EBF1
brush border membrane 1 ACE
blood microparticle 1 BCHE
sperm midpiece 1 ACE
Lipid-anchor, GPI-anchor 1 ACHE
[Isoform 3]: Secreted 1 ATRN
endosome lumen 1 INS
sorting endosome 1 KDR
Lipid droplet 2 LIPE, PLIN2
Membrane, caveola 1 LIPE
side of membrane 1 ACHE
Cytoplasm, myofibril, sarcomere, Z line 1 GGPS1
basal plasma membrane 1 ACE
ficolin-1-rich granule lumen 2 ACLY, CAT
secretory granule lumen 2 CAT, INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 2 BCHE, INS
transcription repressor complex 1 ELANE
phosphatidylinositol 3-kinase complex 1 PIK3CA
phosphatidylinositol 3-kinase complex, class IA 1 PIK3CA
specific granule lumen 1 ELANE
transport vesicle 1 INS
azurophil granule lumen 2 ACLY, ELANE
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
nuclear envelope lumen 1 BCHE
synaptic cleft 1 ACHE
[Isoform 1]: Cell membrane 1 ATRN
dendrite membrane 1 INSR
Cytoplasmic vesicle, phagosome 1 ELANE
catalase complex 1 CAT
insulin receptor complex 1 INSR
[Angiotensin-converting enzyme, soluble form]: Secreted 1 ACE
[Isoform Testis-specific]: Cell membrane 1 ACE
[Isoform H]: Cell membrane 1 ACHE
phosphatidylinositol 3-kinase complex, class IB 1 PIK3CA


文献列表

  • Dalila Touhami, Adedayo O Mofikoya, Robbie D Girling, Ben Langford, Pawel K Misztal, Christian Pfrang. Atmospheric Degradation of Ecologically Important Biogenic Volatiles: Investigating the Ozonolysis of (E)-β-Ocimene, Isomers of α and β-Farnesene, α-Terpinene and 6-Methyl-5-Hepten-2-One, and Their Gas-Phase Products. Journal of chemical ecology. 2024 Jan; ?(?):. doi: 10.1007/s10886-023-01467-6. [PMID: 38195852]
  • Mansureh Ghavam. Phytochemical analysis and antibacterial/antifungal activity of the essential oil of Phlomis olivieri Benth in Iran. Inflammopharmacology. 2023 Mar; ?(?):. doi: 10.1007/s10787-023-01170-8. [PMID: 36884188]
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  • Cuicui Yu, Shixi Gao, Mei Rong, Mengjun Xiao, Yanhong Xu, Jianhe Wei. Identification and characterization of novel sesquiterpene synthases TPS9 and TPS12 from Aquilaria sinensis. PeerJ. 2023; 11(?):e15818. doi: 10.7717/peerj.15818. [PMID: 37663295]
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  • Jinjin Li, Hao Hu, Yu Chen, Jing Xie, Jiawen Li, Tuo Zeng, Manqun Wang, Jing Luo, Riru Zheng, Maarten A Jongsma, Caiyun Wang. Tissue specificity of (E)-β-farnesene and germacrene D accumulation in pyrethrum flowers. Phytochemistry. 2021 Jul; 187(?):112768. doi: 10.1016/j.phytochem.2021.112768. [PMID: 33932787]
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  • Qiang Wang, Peng Xu, Felipe Andreazza, Yahui Liu, Yoshiko Nomura, Phil Duran, Lan Jiang, Mengli Chen, Genki Takamatsu, Makoto Ihara, Kazuhiko Matsuda, Rufus Isaacs, Eugenio E Oliveira, Yuzhe Du, Ke Dong. Identification of multiple odorant receptors essential for pyrethrum repellency in Drosophila melanogaster. PLoS genetics. 2021 07; 17(7):e1009677. doi: 10.1371/journal.pgen.1009677. [PMID: 34237075]
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