Lacto-N-biose I (BioDeep_00000006129)

 

Secondary id: BioDeep_00001869611

human metabolite Endogenous


代谢物信息卡片


N-[(2S,3R,4R,5S,6R)-2,5-Dihydroxy-6-(hydroxymethyl)-4-{[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-3-yl]ethanimidate

化学式: C14H25NO11 (383.1428)
中文名称: 2-乙酰氨基-2-脱氧-3-o-(beta-d-氟代半乳糖)-d-吡喃葡萄糖
谱图信息: 最多检出来源 Homo sapiens(lipidsearch) 29.79%

分子结构信息

SMILES: CC(=O)NC1C(C(C(OC1O)CO)O)OC2C(C(C(C(O2)CO)O)O)O
InChI: InChI=1S/C14H25NO11/c1-4(18)15-7-12(9(20)6(3-17)24-13(7)23)26-14-11(22)10(21)8(19)5(2-16)25-14/h5-14,16-17,19-23H,2-3H2,1H3,(H,15,18)

描述信息

Lacto-N-biose I is a common oligosaccharide found in human milk and in numerous other tissues. Oligosaccharides are important components of glycoproteins and glycolipids and also occur as free oligosaccharides in several body fluids.(PMID: 14993226; 11925506; 11432777; 9760191; 9592127; 8608564; 7591266; 7627975; 7766648; 1490103; 3146987; 6689405) [HMDB]
Lacto-N-biose I is a common oligosaccharide found in human milk and in numerous other tissues. Oligosaccharides are important components of glycoproteins and glycolipids and also occur as free oligosaccharides in several body fluids.(PMID: 14993226; 11925506; 11432777; 9760191; 9592127; 8608564; 7591266; 7627975; 7766648; 1490103; 3146987; 6689405).

同义名列表

24 个代谢物同义名

N-[(2S,3R,4R,5S,6R)-2,5-Dihydroxy-6-(hydroxymethyl)-4-{[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-3-yl]ethanimidate; N-[(2S,3R,4R,5S,6R)-2,5-dihydroxy-6-(hydroxymethyl)-4-{[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-3-yl]acetamide; 6-chloro-2-(n-(2-diethylaminoethyl)-n-methylamino)-ortho-acetotoluidide dihydrochloride; 2-acetamido-2-Deoxy-3-O-beta-delta-galactopyranosyl-delta-glucopyranose; WURCS=2.0/2,2,1/[a2122h-1a_1-5_2*ncc/3=o][a2112h-1b_1-5]/1-2/a3-b1; 2-ACETAMIDO-2-DEOXY-3-O-(BETA-D-GALACTOPYRANOSYL)-D-GLUCOPYRANOSE; 2-acetamido-2-Deoxy-3-O-beta-delta-galactopyranosyl-delta-glucose; 2-acetamido-2-Deoxy-3-O-beta-D-galactopyranosyl-D-glucopyranose; beta-delta-Galactopyranosyl-(1->3)-N-acetyl-delta-glucosamine; 2-acetamido-2-Deoxy-3-O-beta-D-galactopyranosyl-D-glucose; O-beta-delta-Galactopyranosyl-(1->3)-N-acetylglucosamine; 2-acetamido-2-Deoxy-3-O-b-D-galactopyranosyl-D-glucose; beta-D-Galactopyranosyl-(1->3)-N-acetyl-D-glucosamine; O-beta-D-Galactopyranosyl-(1->3)-N-acetylglucosamine; Galactosyl-1,3-N-acetylglucosamine; beta-delta-Gal-(1->3)-delta-glcnac; beta-D-Gal-(1->3)-D-glcnac; Gal(beta1-3)glcnac; Gal(b1-3)a-glcnac; Galbeta1,3GlcNAc; Lacto-N-biose I; Gal-1,3-glcnac; lacto-N-Biose; HexNAc-Hex



数据库引用编号

17 个数据库交叉引用编号

分类词条

相关代谢途径

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代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 9 ALKBH1, CASP3, IL13, LGALS1, LGALS3, LTF, NAGA, TLR2, TLR4
Peripheral membrane protein 1 COQ10A
Endosome membrane 2 TF, TLR4
Endoplasmic reticulum membrane 1 HMOX2
Nucleus 5 ALKBH1, CASP3, CMAS, LGALS3, LTF
cytosol 5 CASP3, GALE, LGALS1, LGALS3, LGALS4
nucleoplasm 4 ALKBH1, CASP3, CMAS, LGALS3
Cell membrane 2 TLR4, TNF
Cytoplasmic side 1 HMOX2
Cytoplasmic granule 1 LTF
Golgi apparatus membrane 1 A4GALT
cell surface 6 LGALS3, LTF, TF, TLR2, TLR4, TNF
glutamatergic synapse 1 CASP3
Golgi apparatus 3 FUT5, NDST1, TLR2
Golgi membrane 3 A4GALT, FUT5, NDST1
mitochondrial inner membrane 2 COQ10A, LGALS3
neuronal cell body 2 CASP3, TNF
Lysosome 1 NAGA
plasma membrane 9 HMOX2, LGALS1, LGALS3, LGALS4, LTF, TF, TLR2, TLR4, TNF
Membrane 7 A4GALT, CMAS, HMOX2, LGALS3, NDST1, TLR2, TLR4
apical plasma membrane 1 TF
extracellular exosome 5 LGALS1, LGALS3, LTF, NAGA, TF
endoplasmic reticulum 1 ALKBH1
extracellular space 8 IL10, IL13, LGALS1, LGALS3, LGALS4, LTF, TF, TNF
perinuclear region of cytoplasm 2 TF, TLR4
mitochondrion 2 ALKBH1, COQ10A
protein-containing complex 1 LTF
Microsome membrane 1 HMOX2
postsynaptic density 1 CASP3
Single-pass type I membrane protein 2 TLR2, TLR4
Secreted 6 IL10, IL13, LGALS1, LGALS3, LTF, TF
extracellular region 7 IL10, IL13, LGALS1, LGALS3, LTF, TF, TNF
basal part of cell 1 TF
external side of plasma membrane 3 IL13, TLR4, TNF
Secreted, extracellular space, extracellular matrix 1 LGALS1
cytoplasmic vesicle 1 TF
Early endosome 3 LTF, TF, TLR4
clathrin-coated pit 1 TF
recycling endosome 3 LTF, TF, TNF
Single-pass type II membrane protein 3 A4GALT, NDST1, TNF
vesicle 1 TF
Mitochondrion inner membrane 1 COQ10A
Matrix side 1 COQ10A
Membrane raft 2 TLR2, TNF
collagen-containing extracellular matrix 3 LGALS1, LGALS3, LGALS4
secretory granule 1 LTF
Cell projection, ruffle 1 TLR4
Late endosome 1 TF
ruffle 1 TLR4
receptor complex 2 TLR2, TLR4
Cytoplasmic vesicle, phagosome membrane 1 TLR2
cell projection 1 TLR2
phagocytic cup 2 TLR4, TNF
phagocytic vesicle membrane 1 TLR2
blood microparticle 1 TF
spliceosomal complex 1 LGALS3
specific granule membrane 1 HMOX2
Golgi cisterna membrane 1 FUT5
euchromatin 1 ALKBH1
cell body 1 TLR2
basal plasma membrane 1 TF
specific granule 1 LTF
trans-Golgi network membrane 1 NDST1
lipopolysaccharide receptor complex 1 TLR4
secretory granule lumen 1 TF
HFE-transferrin receptor complex 1 TF
secretory granule membrane 2 LGALS3, TLR2
endoplasmic reticulum lumen 2 LGALS1, TF
specific granule lumen 1 LTF
tertiary granule lumen 1 LTF
endocytic vesicle 1 TF
immunological synapse 1 LGALS3
Golgi apparatus, cis-Golgi network membrane 1 NDST1
Single-pass type IV membrane protein 1 HMOX2
clathrin-coated endocytic vesicle membrane 1 TF
phagocytic vesicle lumen 1 LTF
ficolin-1-rich granule membrane 1 LGALS3
death-inducing signaling complex 1 CASP3
Toll-like receptor 1-Toll-like receptor 2 protein complex 1 TLR2
Toll-like receptor 2-Toll-like receptor 6 protein complex 1 TLR2
vesicle coat 1 TF
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
galectin complex 1 LGALS1
[Isoform 1]: Golgi apparatus, trans-Golgi network membrane 1 NDST1
[Isoform 3]: Golgi apparatus, cis-Golgi network membrane 1 NDST1
dense body 1 TF
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • Antonio Rubio-Del-Campo, Cristina Alcántara, María Carmen Collado, Jesús Rodríguez-Díaz, María J Yebra. Human milk and mucosa-associated disaccharides impact on cultured infant fecal microbiota. Scientific reports. 2020 07; 10(1):11845. doi: 10.1038/s41598-020-68718-4. [PMID: 32678209]
  • Takumi Satoh, Toshitaka Odamaki, Mariko Namura, Takashi Shimizu, Keiji Iwatsuki, Mamoru Nishimoto, Motomitsu Kitaoka, Jin-zhong Xiao. In vitro comparative evaluation of the impact of lacto-N-biose I, a major building block of human milk oligosaccharides, on the fecal microbiota of infants. Anaerobe. 2013 Feb; 19(?):50-7. doi: 10.1016/j.anaerobe.2012.12.007. [PMID: 23270920]
  • S Akamatsu, S Yazawa, T Tachikawa, T Furuta, Y Okaichi, J Nakamura, T Asao, Y Nagamachi. Alpha 2-->3sialyltransferase associated with the synthesis of CA 19-9 in colorectal tumors. Cancer. 1996 Apr; 77(8 Suppl):1694-700. doi: 10.1002/(sici)1097-0142(19960415)77:8<1694::aid-cncr41>3.0.co;2-s. [PMID: 8608564]
  • F P Thomas, A M Lee, S N Romas, N Latov. Monoclonal IgMs with anti-Gal(beta 1-3) GalNAc activity in lower motor neuron disease; identification of glycoprotein antigens in neural tissue and cross-reactivity with serum immunoglobulins. Journal of neuroimmunology. 1989 Jul; 23(2):167-74. doi: 10.1016/0165-5728(89)90036-2. [PMID: 2470785]
  • F P Thomas, P H Adapon, G P Goldberg, N Latov, A P Hays. Localization of neural epitopes that bind to IgM monoclonal autoantibodies (M-proteins) from two patients with motor neuron disease. Journal of neuroimmunology. 1989 Jan; 21(1):31-9. doi: 10.1016/0165-5728(89)90156-2. [PMID: 2461959]