indole-3-acetamide (BioDeep_00000405866)

Main id: BioDeep_00000003131

 

natural product PANOMIX_OTCML-2023 BioNovoGene_Lab2019


代谢物信息卡片


indole-3-acetamide

化学式: C10H10N2O (174.0793)
中文名称: 3-吲哚乙酰胺
谱图信息: 最多检出来源 Homo sapiens(blood) 46.73%

分子结构信息

SMILES: C1=CC=C2C(=C1)C(=CN2)CC(=O)N
InChI: InChI=1S/C10H10N2O/c11-10(13)5-7-6-12-9-4-2-1-3-8(7)9/h1-4,6,12H,5H2,(H2,11,13)

描述信息

A member of the class of indoles that is acetamide substituted by a 1H-indol-3-yl group at position 2. It is an intermediate in the production of plant hormone indole acetic acid (IAA).
D006133 - Growth Substances > D010937 - Plant Growth Regulators > D007210 - Indoleacetic Acids
Indole-3-acetamide is a biosynthesis intermediate of indole-3-acetic acid (HY-18569). Indole-3-acetic acid is the most common natural plant growth hormone of the auxin class[1].

同义名列表

2 个代谢物同义名

indole-3-acetamide; (Indol-3-yl)acetamide



数据库引用编号

43 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

11 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 13 AHR, AOC3, CAT, CNR1, CNR2, CYP3A4, DAO, GAPDH, NIT1, NIT2, PFDN5, PIK3R5, PTGS1
Peripheral membrane protein 3 DAO, PIK3R5, PTGS1
Endoplasmic reticulum membrane 3 CYP3A4, FAAH, PTGS1
Mitochondrion membrane 1 TSPO
Nucleus 7 AHR, GAPDH, MYB, NIT1, NR1I2, PFDN5, PIK3R5
cytosol 9 AHR, CAT, DAO, GAPDH, MYB, NIT2, PFDN5, PIK3R5, TSPO
dendrite 2 CNR2, NECTIN1
mitochondrial membrane 1 TSPO
nuclear body 1 NR1I2
centrosome 1 NIT2
nucleoplasm 3 AHR, MYB, NR1I2
RNA polymerase II transcription regulator complex 1 MYB
Cell membrane 6 AOC3, CNR1, DAO, NECTIN1, PIK3R5, PSD
Cleavage furrow 1 PSD
ruffle membrane 1 PSD
Cell projection, axon 1 CNR1
Multi-pass membrane protein 3 CNR1, FAAH, TSPO
cell surface 1 AOC3
glutamatergic synapse 2 CNR1, FAAH
Golgi apparatus 2 AOC3, PTGS1
growth cone 1 CNR1
postsynapse 1 FAAH
presynaptic membrane 1 CNR1
Cytoplasm, cytosol 2 DAO, GAPDH
Lysosome 1 IL4I1
Presynapse 2 CNR1, FAAH
acrosomal vesicle 1 IL4I1
plasma membrane 7 AOC3, CNR1, CNR2, DAO, GAPDH, NECTIN1, PIK3R5
presynaptic active zone 1 DAO
Membrane 9 AOC3, CAT, CYP3A4, FAAH, GAPDH, MYB, NECTIN1, PIK3R5, TSPO
axon 1 CNR1
extracellular exosome 6 CAT, DAO, GAPDH, NIT2, PTGS1, TSPO
endoplasmic reticulum 4 AOC3, CNR2, FAAH, TSPO
extracellular space 1 DAO
perinuclear region of cytoplasm 1 GAPDH
adherens junction 1 NECTIN1
bicellular tight junction 1 DAO
mitochondrion 4 CAT, NIT1, NIT2, TSPO
protein-containing complex 2 AHR, CAT
intracellular membrane-bounded organelle 5 CAT, CYP3A4, GAPDH, PTGS1, TSPO
Microsome membrane 3 CYP3A4, FAAH, PTGS1
Single-pass type I membrane protein 1 NECTIN1
Secreted 2 DAO, IL4I1
extracellular region 5 CAT, DAO, IL4I1, NECTIN1, NIT2
Mitochondrion outer membrane 1 CNR1
Single-pass membrane protein 1 FAAH
mitochondrial outer membrane 2 CNR1, TSPO
hippocampal mossy fiber to CA3 synapse 1 NECTIN1
mitochondrial matrix 1 CAT
Extracellular side 1 DAO
transcription regulator complex 2 AHR, NR1I2
centriolar satellite 1 PIK3R5
photoreceptor outer segment 1 PTGS1
nuclear membrane 1 GAPDH
actin cytoskeleton 1 CNR1
dendritic spine 1 PSD
perikaryon 1 CNR2
microtubule cytoskeleton 1 GAPDH
Early endosome 1 AOC3
Single-pass type II membrane protein 1 AOC3
vesicle 1 GAPDH
postsynaptic membrane 1 CNR2
presynaptic active zone membrane 1 NECTIN1
Cell projection, ruffle membrane 1 PSD
Cytoplasm, perinuclear region 1 GAPDH
Membrane raft 1 CNR1
Cytoplasm, cytoskeleton 2 FAAH, GAPDH
focal adhesion 1 CAT
GABA-ergic synapse 1 CNR1
Cell junction, adherens junction 1 NECTIN1
Peroxisome 2 CAT, DAO
Peroxisome matrix 2 CAT, DAO
peroxisomal matrix 2 CAT, DAO
peroxisomal membrane 1 CAT
neuron projection 1 PTGS1
chromatin 2 AHR, NR1I2
cell projection 1 DAO
cytoskeleton 2 FAAH, GAPDH
Secreted, extracellular space 1 DAO
[Isoform 2]: Mitochondrion 1 NIT1
Cytoplasmic vesicle, secretory vesicle, acrosome 1 IL4I1
sperm midpiece 1 IL4I1
postsynaptic density, intracellular component 1 PSD
organelle membrane 1 FAAH
Endomembrane system 2 FAAH, PTGS1
microvillus 1 AOC3
Lipid droplet 1 GAPDH
aryl hydrocarbon receptor complex 1 AHR
Cell projection, dendrite 1 CNR2
Presynaptic cell membrane 1 NECTIN1
intermediate filament cytoskeleton 2 NR1I2, PFDN5
[Isoform 1]: Cytoplasm 1 NIT1
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 1 CAT
nuclear matrix 1 MYB
phosphatidylinositol 3-kinase complex 1 PIK3R5
phosphatidylinositol 3-kinase complex, class IA 1 PIK3R5
specific granule lumen 2 DAO, NIT2
tertiary granule lumen 1 NIT2
immunological synapse 1 IL4I1
ribonucleoprotein complex 1 GAPDH
extrinsic component of cytoplasmic side of plasma membrane 1 CNR2
prefoldin complex 1 PFDN5
apical junction complex 1 NECTIN1
GAIT complex 1 GAPDH
cell-cell contact zone 1 NECTIN1
catalase complex 1 CAT
growth cone membrane 1 NECTIN1
nuclear aryl hydrocarbon receptor complex 1 AHR
cytosolic aryl hydrocarbon receptor complex 1 AHR
phosphatidylinositol 3-kinase complex, class IB 1 PIK3R5
[Isoform Alpha]: Cell membrane 1 NECTIN1
[Isoform Delta]: Cell membrane 1 NECTIN1
[Isoform Gamma]: Secreted 1 NECTIN1


文献列表

  • Mengqi Wang, Xiaoyan Feng, Yu Zhao, Yuzhi Lan, Hengyi Xu. Indole-3-acetamide from gut microbiota activated hepatic AhR and mediated the remission effect of Lactiplantibacillus plantarum P101 on alcoholic liver injury in mice. Food & function. 2023 Nov; ?(?):. doi: 10.1039/d3fo03585a. [PMID: 37947440]
  • José Moya-Cuevas, Marta-Marina Pérez-Alonso, Paloma Ortiz-García, Stephan Pollmann. Beyond the Usual Suspects: Physiological Roles of the Arabidopsis Amidase Signature (AS) Superfamily Members in Plant Growth Processes and Stress Responses. Biomolecules. 2021 08; 11(8):. doi: 10.3390/biom11081207. [PMID: 34439873]
  • Linda Jahn, Uta Hofmann, Jutta Ludwig-Müller. Indole-3-Acetic Acid Is Synthesized by the Endophyte Cyanodermella asteris via a Tryptophan-Dependent and -Independent Way and Mediates the Interaction with a Non-Host Plant. International journal of molecular sciences. 2021 Mar; 22(5):. doi: 10.3390/ijms22052651. [PMID: 33800748]
  • Beatriz Sánchez-Parra, Marta-Marina Pérez-Alonso, Paloma Ortiz-García, José Moya-Cuevas, Mathias Hentrich, Stephan Pollmann. Accumulation of the Auxin Precursor Indole-3-Acetamide Curtails Growth through the Repression of Ribosome-Biogenesis and Development-Related Transcriptional Networks. International journal of molecular sciences. 2021 Feb; 22(4):. doi: 10.3390/ijms22042040. [PMID: 33670805]
  • Marta-Marina Pérez-Alonso, Paloma Ortiz-García, José Moya-Cuevas, Thomas Lehmann, Beatriz Sánchez-Parra, Robert G Björk, Sazzad Karim, Mohammad R Amirjani, Henrik Aronsson, Mark D Wilkinson, Stephan Pollmann. Endogenous indole-3-acetamide levels contribute to the crosstalk between auxin and abscisic acid, and trigger plant stress responses in Arabidopsis. Journal of experimental botany. 2021 02; 72(2):459-475. doi: 10.1093/jxb/eraa485. [PMID: 33068437]
  • Yangbin Gao, Xinhua Dai, Yuki Aoi, Yumiko Takebayashi, Liping Yang, Xiaorui Guo, Qiwei Zeng, Hanchuanzhi Yu, Hiroyuki Kasahara, Yunde Zhao. Two homologous INDOLE-3-ACETAMIDE (IAM) HYDROLASE genes are required for the auxin effects of IAM in Arabidopsis. Journal of genetics and genomics = Yi chuan xue bao. 2020 03; 47(3):157-165. doi: 10.1016/j.jgg.2020.02.009. [PMID: 32327358]
  • Rubén Tenorio-Berrío, Marta-Marina Pérez-Alonso, Jesús Vicente-Carbajosa, Leticia Martín-Torres, Ingo Dreyer, Stephan Pollmann. Identification of Two Auxin-Regulated Potassium Transporters Involved in Seed Maturation. International journal of molecular sciences. 2018 Jul; 19(7):. doi: 10.3390/ijms19072132. [PMID: 30037141]
  • Mengsha Li, Rui Guo, Fei Yu, Xu Chen, Haiyan Zhao, Huixin Li, Jun Wu. Indole-3-Acetic Acid Biosynthesis Pathways in the Plant-Beneficial Bacterium Arthrobacter pascens ZZ21. International journal of molecular sciences. 2018 Feb; 19(2):. doi: 10.3390/ijms19020443. [PMID: 29389906]
  • Jan Šimura, Lukáš Spíchal, Lubomír Adamec, Aleš Pěnčík, Jakub Rolčík, Ondřej Novák, Miroslav Strnad. Cytokinin, auxin and physiological polarity in the aquatic carnivorous plants Aldrovanda vesiculosa and Utricularia australis. Annals of botany. 2016 05; 117(6):1037-44. doi: 10.1093/aob/mcw020. [PMID: 27098087]
  • Arjun Khakhar, Nicholas J Bolten, Jennifer Nemhauser, Eric Klavins. Cell-Cell Communication in Yeast Using Auxin Biosynthesis and Auxin Responsive CRISPR Transcription Factors. ACS synthetic biology. 2016 Apr; 5(4):279-86. doi: 10.1021/acssynbio.5b00064. [PMID: 26102245]
  • Helena M Gaweska, Alexander B Taylor, P John Hart, Paul F Fitzpatrick. Structure of the flavoprotein tryptophan 2-monooxygenase, a key enzyme in the formation of galls in plants. Biochemistry. 2013 Apr; 52(15):2620-6. doi: 10.1021/bi4001563. [PMID: 23521653]
  • Christian O Dimkpa, Jia Zeng, Joan E McLean, David W Britt, Jixun Zhan, Anne J Anderson. Production of indole-3-acetic acid via the indole-3-acetamide pathway in the plant-beneficial bacterium Pseudomonas chlororaphis O6 is inhibited by ZnO nanoparticles but enhanced by CuO nanoparticles. Applied and environmental microbiology. 2012 Mar; 78(5):1404-10. doi: 10.1128/aem.07424-11. [PMID: 22210218]
  • Álvaro L Pérez-Quintero, Andrés Quintero, Oscar Urrego, Pablo Vanegas, Camilo López. Bioinformatic identification of cassava miRNAs differentially expressed in response to infection by Xanthomonas axonopodis pv. manihotis. BMC plant biology. 2012 Feb; 12(?):29. doi: 10.1186/1471-2229-12-29. [PMID: 22361011]
  • Hongbo Liu, Xianghua Li, Jinghua Xiao, Shiping Wang. A convenient method for simultaneous quantification of multiple phytohormones and metabolites: application in study of rice-bacterium interaction. Plant methods. 2012 Jan; 8(1):2. doi: 10.1186/1746-4811-8-2. [PMID: 22243810]
  • Federico Martinelli, Sandra L Uratsu, Ute Albrecht, Russell L Reagan, My L Phu, Monica Britton, Vincent Buffalo, Joseph Fass, Elizabeth Leicht, Weixiang Zhao, Dawei Lin, Raissa D'Souza, Cristina E Davis, Kim D Bowman, Abhaya M Dandekar. Transcriptome profiling of citrus fruit response to huanglongbing disease. PloS one. 2012; 7(5):e38039. doi: 10.1371/journal.pone.0038039. [PMID: 22675433]
  • Christine Böttcher, Eric G Dennis, Grant W Booker, Steven W Polyak, Paul K Boss, Christopher Davies. A novel tool for studying auxin-metabolism: the inhibition of grapevine indole-3-acetic acid-amido synthetases by a reaction intermediate analogue. PloS one. 2012; 7(5):e37632. doi: 10.1371/journal.pone.0037632. [PMID: 22649546]
  • Karl J Niklas, Ulrich Kutschera. Plant development, auxin, and the subsystem incompleteness theorem. Frontiers in plant science. 2012; 3(?):37. doi: 10.3389/fpls.2012.00037. [PMID: 22645582]
  • Elena Tsavkelova, Birgitt Oeser, Liat Oren-Young, Maayan Israeli, Yehezkel Sasson, Bettina Tudzynski, Amir Sharon. Identification and functional characterization of indole-3-acetamide-mediated IAA biosynthesis in plant-associated Fusarium species. Fungal genetics and biology : FG & B. 2012 Jan; 49(1):48-57. doi: 10.1016/j.fgb.2011.10.005. [PMID: 22079545]
  • Nathalie Kühn, Patricio Arce-Johnson. Pollination: a key event controlling the expression of genes related to phytohormone biosynthesis during grapevine berry formation. Plant signaling & behavior. 2012 Jan; 7(1):7-11. doi: 10.4161/psb.7.1.18353. [PMID: 22301957]
  • Takeshi Nishimura, Kiminori Toyooka, Mayuko Sato, Sachiko Matsumoto, M Mercedes Lucas, Miroslav Strnad, Frantisek Baluska, Tomokazu Koshiba. Immunohistochemical observation of indole-3-acetic acid at the IAA synthetic maize coleoptile tips. Plant signaling & behavior. 2011 Dec; 6(12):2013-22. doi: 10.4161/psb.6.12.18080. [PMID: 22112455]
  • Sabine Guillaumie, Romain Fouquet, Christian Kappel, Céline Camps, Nancy Terrier, Dominique Moncomble, Jake D Dunlevy, Christopher Davies, Paul K Boss, Serge Delrot. Transcriptional analysis of late ripening stages of grapevine berry. BMC plant biology. 2011 Nov; 11(?):165. doi: 10.1186/1471-2229-11-165. [PMID: 22098939]
  • Ana M Fortes, Patricia Agudelo-Romero, Marta S Silva, Kashif Ali, Lisete Sousa, Federica Maltese, Young H Choi, Jerome Grimplet, José M Martinez-Zapater, Robert Verpoorte, Maria S Pais. Transcript and metabolite analysis in Trincadeira cultivar reveals novel information regarding the dynamics of grape ripening. BMC plant biology. 2011 Nov; 11(?):149. doi: 10.1186/1471-2229-11-149. [PMID: 22047180]
  • Sergey N Lomin, Keiko Yonekura-Sakakibara, Georgy A Romanov, Hitoshi Sakakibara. Ligand-binding properties and subcellular localization of maize cytokinin receptors. Journal of experimental botany. 2011 Oct; 62(14):5149-59. doi: 10.1093/jxb/err220. [PMID: 21778179]
  • Fernando H Sant'Anna, Luiz G P Almeida, Ricardo Cecagno, Luciano A Reolon, Franciele M Siqueira, Maicon R S Machado, Ana T R Vasconcelos, Irene S Schrank. Genomic insights into the versatility of the plant growth-promoting bacterium Azospirillum amazonense. BMC genomics. 2011 Aug; 12(?):409. doi: 10.1186/1471-2164-12-409. [PMID: 21838888]
  • Simone D Castellarin, Greg A Gambetta, Hiroshi Wada, Ken A Shackel, Mark A Matthews. Fruit ripening in Vitis vinifera: spatiotemporal relationships among turgor, sugar accumulation, and anthocyanin biosynthesis. Journal of experimental botany. 2011 Aug; 62(12):4345-54. doi: 10.1093/jxb/err150. [PMID: 21586429]
  • Huimin Man, Stephan Pollmann, Elmar W Weiler, Edward G Kirby. Increased glutamine in leaves of poplar transgenic with pine GS1a caused greater anthranilate synthetase α-subunit (ASA1) transcript and protein abundances: an auxin-related mechanism for enhanced growth in GS transgenics?. Journal of experimental botany. 2011 Aug; 62(13):4423-31. doi: 10.1093/jxb/err026. [PMID: 21642235]
  • Christine Böttcher, Paul K Boss, Christopher Davies. Acyl substrate preferences of an IAA-amido synthetase account for variations in grape (Vitis vinifera L.) berry ripening caused by different auxinic compounds indicating the importance of auxin conjugation in plant development. Journal of experimental botany. 2011 Aug; 62(12):4267-80. doi: 10.1093/jxb/err134. [PMID: 21543520]
  • Ying-Hua Su, Yu-Bo Liu, Xian-Sheng Zhang. Auxin-cytokinin interaction regulates meristem development. Molecular plant. 2011 Jul; 4(4):616-25. doi: 10.1093/mp/ssr007. [PMID: 21357646]
  • Jeong Im Kim, Angus S Murphy, Dongwon Baek, Shin-Woo Lee, Dae-Jin Yun, Ray A Bressan, Meena L Narasimhan. YUCCA6 over-expression demonstrates auxin function in delaying leaf senescence in Arabidopsis thaliana. Journal of experimental botany. 2011 Jul; 62(11):3981-92. doi: 10.1093/jxb/err094. [PMID: 21511905]
  • Yong-Guy Kim, Jin-Hyung Lee, Moo Hwan Cho, Jintae Lee. Indole and 3-indolylacetonitrile inhibit spore maturation in Paenibacillus alvei. BMC microbiology. 2011 May; 11(?):119. doi: 10.1186/1471-2180-11-119. [PMID: 21619597]
  • Fábio O Pedrosa, Rose Adele Monteiro, Roseli Wassem, Leonardo M Cruz, Ricardo A Ayub, Nelson B Colauto, Maria Aparecida Fernandez, Maria Helena P Fungaro, Edmundo C Grisard, Mariangela Hungria, Humberto M F Madeira, Rubens O Nodari, Clarice A Osaku, Maria Luiza Petzl-Erler, Hernán Terenzi, Luiz G E Vieira, Maria Berenice R Steffens, Vinicius A Weiss, Luiz F P Pereira, Marina I M Almeida, Lysangela R Alves, Anelis Marin, Luiza Maria Araujo, Eduardo Balsanelli, Valter A Baura, Leda S Chubatsu, Helisson Faoro, Augusto Favetti, Geraldo Friedermann, Chirlei Glienke, Susan Karp, Vanessa Kava-Cordeiro, Roberto T Raittz, Humberto J O Ramos, Enilze Maria S F Ribeiro, Liu Un Rigo, Saul N Rocha, Stefan Schwab, Anilda G Silva, Eliel M Souza, Michelle Z Tadra-Sfeir, Rodrigo A Torres, Audrei N G Dabul, Maria Albertina M Soares, Luciano S Gasques, Ciela C T Gimenes, Juliana S Valle, Ricardo R Ciferri, Luiz C Correa, Norma K Murace, João A Pamphile, Eliana Valéria Patussi, Alberto J Prioli, Sonia Maria A Prioli, Carmem Lúcia M S C Rocha, Olívia Márcia N Arantes, Márcia Cristina Furlaneto, Leandro P Godoy, Carlos E C Oliveira, Daniele Satori, Laurival A Vilas-Boas, Maria Angélica E Watanabe, Bibiana Paula Dambros, Miguel P Guerra, Sandra Marisa Mathioni, Karine Louise Santos, Mario Steindel, Javier Vernal, Fernando G Barcellos, Rubens J Campo, Ligia Maria O Chueire, Marisa Fabiana Nicolás, Lilian Pereira-Ferrari, José L da Conceição Silva, Nereida M R Gioppo, Vladimir P Margarido, Maria Amélia Menck-Soares, Fabiana Gisele S Pinto, Rita de Cássia G Simão, Elizabete K Takahashi, Marshall G Yates, Emanuel M Souza. Genome of Herbaspirillum seropedicae strain SmR1, a specialized diazotrophic endophyte of tropical grasses. PLoS genetics. 2011 May; 7(5):e1002064. doi: 10.1371/journal.pgen.1002064. [PMID: 21589895]
  • Mandira Kochar, Ashutosh Upadhyay, Sheela Srivastava. Indole-3-acetic acid biosynthesis in the biocontrol strain Pseudomonas fluorescens Psd and plant growth regulation by hormone overexpression. Research in microbiology. 2011 May; 162(4):426-35. doi: 10.1016/j.resmic.2011.03.006. [PMID: 21397014]
  • Xiao Wu, Sébastien Monchy, Safiyh Taghavi, Wei Zhu, Juan Ramos, Daniel van der Lelie. Comparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida. FEMS microbiology reviews. 2011 Mar; 35(2):299-323. doi: 10.1111/j.1574-6976.2010.00249.x. [PMID: 20796030]
  • Kimberly A Phillips, Andrea L Skirpan, Xing Liu, Ashley Christensen, Thomas L Slewinski, Christopher Hudson, Solmaz Barazesh, Jerry D Cohen, Simon Malcomber, Paula McSteen. vanishing tassel2 encodes a grass-specific tryptophan aminotransferase required for vegetative and reproductive development in maize. The Plant cell. 2011 Feb; 23(2):550-66. doi: 10.1105/tpc.110.075267. [PMID: 21335375]
  • Neil Fernandes, Rebecca J Case, Sharon R Longford, Mohammad R Seyedsayamdost, Peter D Steinberg, Staffan Kjelleberg, Torsten Thomas. Genomes and virulence factors of novel bacterial pathogens causing bleaching disease in the marine red alga Delisea pulchra. PloS one. 2011; 6(12):e27387. doi: 10.1371/journal.pone.0027387. [PMID: 22162749]
  • Annette T Maier, Sandra Stehling-Sun, Sarah-Lena Offenburger, Jan U Lohmann. The bZIP Transcription Factor PERIANTHIA: A Multifunctional Hub for Meristem Control. Frontiers in plant science. 2011; 2(?):79. doi: 10.3389/fpls.2011.00079. [PMID: 22645551]
  • Jing Fu, Shiping Wang. Insights into auxin signaling in plant-pathogen interactions. Frontiers in plant science. 2011; 2(?):74. doi: 10.3389/fpls.2011.00074. [PMID: 22639609]
  • Yuya Yoshimitsu, Kiwamu Tanaka, Wataru Fukuda, Tadao Asami, Shigeo Yoshida, Ken-Ichiro Hayashi, Yuji Kamiya, Yusuke Jikumaru, Tomoaki Shigeta, Yasushi Nakamura, Tomoaki Matsuo, Shigehisa Okamoto. Transcription of DWARF4 plays a crucial role in auxin-regulated root elongation in addition to brassinosteroid homeostasis in Arabidopsis thaliana. PloS one. 2011; 6(8):e23851. doi: 10.1371/journal.pone.0023851. [PMID: 21909364]
  • Theo H M Smits, Fabio Rezzonico, Tim Kamber, Jochen Blom, Alexander Goesmann, Carol A Ishimaru, Jürg E Frey, Virginia O Stockwell, Brion Duffy. Metabolic versatility and antibacterial metabolite biosynthesis are distinguishing genomic features of the fire blight antagonist Pantoea vagans C9-1. PloS one. 2011; 6(7):e22247. doi: 10.1371/journal.pone.0022247. [PMID: 21789243]
  • Jing Fu, Hongbo Liu, Yu Li, Huihui Yu, Xianghua Li, Jinghua Xiao, Shiping Wang. Manipulating broad-spectrum disease resistance by suppressing pathogen-induced auxin accumulation in rice. Plant physiology. 2011 Jan; 155(1):589-602. doi: 10.1104/pp.110.163774. [PMID: 21071600]
  • Sabrina Taliani, Isabella Pugliesi, Federico Da Settimo. Structural requirements to obtain highly potent and selective 18 kDa Translocator Protein (TSPO) Ligands. Current topics in medicinal chemistry. 2011; 11(7):860-86. doi: 10.2174/156802611795165142. [PMID: 21291396]
  • Maik Hoffmann, Thomas Lehmann, Daniel Neu, Mathias Hentrich, Stephan Pollmann. Expression of AMIDASE1 (AMI1) is suppressed during the first two days after germination. Plant signaling & behavior. 2010 Dec; 5(12):1642-4. doi: 10.4161/psb.5.12.13810. [PMID: 21150258]
  • Nathan D Tivendale, Noel W Davies, Peter P Molesworth, Sandra E Davidson, Jason A Smith, Edwin K Lowe, James B Reid, John J Ross. Reassessing the role of N-hydroxytryptamine in auxin biosynthesis. Plant physiology. 2010 Dec; 154(4):1957-65. doi: 10.1104/pp.110.165803. [PMID: 20974893]
  • Pratibha Vyas, Robin Joshi, K C Sharma, Praveen Rahi, Ashu Gulati, Arvind Gulati. Cold-adapted and rhizosphere-competent strain of Rahnella sp. with broad-spectrum plant growth-promotion potential. Journal of microbiology and biotechnology. 2010 Dec; 20(12):1724-34. doi: . [PMID: 21193830]
  • Purushothaman Natarajan, Deepa Kanagasabapathy, Gnanasekaran Gunadayalan, Jasintha Panchalingam, Noopur Shree, Priyanka Annabel Sugantham, Kavita Kumari Singh, Parani Madasamy. Gene discovery from Jatropha curcas by sequencing of ESTs from normalized and full-length enriched cDNA library from developing seeds. BMC genomics. 2010 Oct; 11(?):606. doi: 10.1186/1471-2164-11-606. [PMID: 20979643]
  • Meng Yuan, Zhaohui Chu, Xianghua Li, Caiguo Xu, Shiping Wang. The bacterial pathogen Xanthomonas oryzae overcomes rice defenses by regulating host copper redistribution. The Plant cell. 2010 Sep; 22(9):3164-76. doi: 10.1105/tpc.110.078022. [PMID: 20852017]
  • Christine Böttcher, Robert A Keyzers, Paul K Boss, Christopher Davies. Sequestration of auxin by the indole-3-acetic acid-amido synthetase GH3-1 in grape berry (Vitis vinifera L.) and the proposed role of auxin conjugation during ripening. Journal of experimental botany. 2010 Aug; 61(13):3615-25. doi: 10.1093/jxb/erq174. [PMID: 20581124]
  • James Breen, Dora Li, David S Dunn, Ferenc Békés, Xiuying Kong, Juncheng Zhang, Jizeng Jia, Thomas Wicker, Rohit Mago, Wujun Ma, Matthew Bellgard, Rudi Appels. Wheat beta-expansin (EXPB11) genes: Identification of the expressed gene on chromosome 3BS carrying a pollen allergen domain. BMC plant biology. 2010 May; 10(?):99. doi: 10.1186/1471-2229-10-99. [PMID: 20507562]
  • Safiyh Taghavi, Daniel van der Lelie, Adam Hoffman, Yian-Biao Zhang, Michael D Walla, Jaco Vangronsveld, Lee Newman, Sébastien Monchy. Genome sequence of the plant growth promoting endophytic bacterium Enterobacter sp. 638. PLoS genetics. 2010 May; 6(5):e1000943. doi: 10.1371/journal.pgen.1000943. [PMID: 20485560]
  • William M Truman, Mark H Bennett, Colin G N Turnbull, Murray R Grant. Arabidopsis auxin mutants are compromised in systemic acquired resistance and exhibit aberrant accumulation of various indolic compounds. Plant physiology. 2010 Mar; 152(3):1562-73. doi: 10.1104/pp.109.152173. [PMID: 20081042]
  • Shuangyi Bai, Belinda Willard, Laura J Chapin, Michael T Kinter, David M Francis, Anthony D Stead, Michelle L Jones. Proteomic analysis of pollination-induced corolla senescence in petunia. Journal of experimental botany. 2010 Feb; 61(4):1089-109. doi: 10.1093/jxb/erp373. [PMID: 20110265]
  • Yoshihiro Mano, Keiichirou Nemoto, Masashi Suzuki, Hikaru Seki, Isao Fujii, Toshiya Muranaka. The AMI1 gene family: indole-3-acetamide hydrolase functions in auxin biosynthesis in plants. Journal of experimental botany. 2010; 61(1):25-32. doi: 10.1093/jxb/erp292. [PMID: 19887500]
  • Véronique Chagué, Rudy Maor, Amir Sharon. CgOpt1, a putative oligopeptide transporter from Colletotrichum gloeosporioides that is involved in responses to auxin and pathogenicity. BMC microbiology. 2009 Aug; 9(?):173. doi: 10.1186/1471-2180-9-173. [PMID: 19698103]
  • Qingfeng Chen, Baichen Zhang, Leslie M Hicks, Shiping Wang, Joseph M Jez. A liquid chromatography-tandem mass spectrometry-based assay for indole-3-acetic acid-amido synthetase. Analytical biochemistry. 2009 Jul; 390(2):149-54. doi: 10.1016/j.ab.2009.04.027. [PMID: 19393612]
  • Laura Chalupowicz, Isaac Barash, Mary Panijel, Guido Sessa, Shulamit Manulis-Sasson. Regulatory interactions between quorum-sensing, auxin, cytokinin, and the Hrp regulon in relation to gall formation and epiphytic fitness of Pantoea agglomerans pv. gypsophilae. Molecular plant-microbe interactions : MPMI. 2009 Jul; 22(7):849-56. doi: 10.1094/mpmi-22-7-0849. [PMID: 19522567]
  • Esther Imperlini, Carmelina Bianco, Enza Lonardo, Serena Camerini, Michele Cermola, Giancarlo Moschetti, Roberto Defez. Effects of indole-3-acetic acid on Sinorhizobium meliloti survival and on symbiotic nitrogen fixation and stem dry weight production. Applied microbiology and biotechnology. 2009 Jun; 83(4):727-38. doi: 10.1007/s00253-009-1974-z. [PMID: 19343341]
  • Casandra K Gutierrez, George Y Matsui, David E Lincoln, Charles R Lovell. Production of the phytohormone indole-3-acetic acid by estuarine species of the genus Vibrio. Applied and environmental microbiology. 2009 Apr; 75(8):2253-8. doi: 10.1128/aem.02072-08. [PMID: 19218411]
  • Stephan Pollmann, Petra Düchting, Elmar W Weiler. Tryptophan-dependent indole-3-acetic acid biosynthesis by 'IAA-synthase' proceeds via indole-3-acetamide. Phytochemistry. 2009 Mar; 70(4):523-31. doi: 10.1016/j.phytochem.2009.01.021. [PMID: 19268331]
  • Keiichirou Nemoto, Masamitsu Hara, Masashi Suzuki, Hikaru Seki, Toshiya Muranaka, Yoshihiro Mano. The NtAMI1 gene functions in cell division of tobacco BY-2 cells in the presence of indole-3-acetamide. FEBS letters. 2009 Jan; 583(2):487-92. doi: 10.1016/j.febslet.2008.12.049. [PMID: 19121311]
  • Federico Martinelli, Sandra L Uratsu, Russell L Reagan, Ying Chen, David Tricoli, Oliver Fiehn, David M Rocke, Charles S Gasser, Abhaya M Dandekar. Gene regulation in parthenocarpic tomato fruit. Journal of experimental botany. 2009; 60(13):3873-90. doi: 10.1093/jxb/erp227. [PMID: 19700496]
  • Wenfei Xiao, Hongbo Liu, Yu Li, Xianghua Li, Caiguo Xu, Manyuan Long, Shiping Wang. A rice gene of de novo origin negatively regulates pathogen-induced defense response. PloS one. 2009; 4(2):e4603. doi: 10.1371/journal.pone.0004603. [PMID: 19240804]
  • Alida Ballester, Magdalena Cervera, Leandro Peña. Evaluation of selection strategies alternative to nptII in genetic transformation of citrus. Plant cell reports. 2008 Jun; 27(6):1005-15. doi: 10.1007/s00299-008-0523-z. [PMID: 18317775]
  • Yong Zhang, Lihong Zhao, Yao Wang, Baoyu Yang, Shiyun Chen. Enhancement of heavy metal accumulation by tissue specific co-expression of iaaM and ACC deaminase genes in plants. Chemosphere. 2008 Jun; 72(4):564-71. doi: 10.1016/j.chemosphere.2008.03.043. [PMID: 18471863]
  • Anelise Beneduzi, Daiane Peres, Pedro Beschoren da Costa, Maria Helena Bodanese Zanettini, Luciane Maria Pereira Passaglia. Genetic and phenotypic diversity of plant-growth-promoting bacilli isolated from wheat fields in southern Brazil. Research in microbiology. 2008 May; 159(4):244-50. doi: 10.1016/j.resmic.2008.03.003. [PMID: 18490146]
  • Britta Ehlert, Mark Aurel Schöttler, Gilbert Tischendorf, Jutta Ludwig-Müller, Ralph Bock. The paramutated SULFUREA locus of tomato is involved in auxin biosynthesis. Journal of experimental botany. 2008; 59(13):3635-47. doi: 10.1093/jxb/ern213. [PMID: 18757490]
  • Xinhua Ding, Yinglong Cao, Liling Huang, Jing Zhao, Caiguo Xu, Xianghua Li, Shiping Wang. Activation of the indole-3-acetic acid-amido synthetase GH3-8 suppresses expansin expression and promotes salicylate- and jasmonate-independent basal immunity in rice. The Plant cell. 2008 Jan; 20(1):228-40. doi: 10.1105/tpc.107.055657. [PMID: 18192436]
  • Elena A Tsavkelova, Tatiana A Cherdyntseva, Svetlana Yu Klimova, Andrey I Shestakov, Svetlana G Botina, Alexander I Netrusov. Orchid-associated bacteria produce indole-3-acetic acid, promote seed germination, and increase their microbial yield in response to exogenous auxin. Archives of microbiology. 2007 Dec; 188(6):655-64. doi: 10.1007/s00203-007-0286-x. [PMID: 17687544]
  • Stefania Pilati, Michele Perazzolli, Andrea Malossini, Alessandro Cestaro, Lorenzo Demattè, Paolo Fontana, Antonio Dal Ri, Roberto Viola, Riccardo Velasco, Claudio Moser. Genome-wide transcriptional analysis of grapevine berry ripening reveals a set of genes similarly modulated during three seasons and the occurrence of an oxidative burst at vèraison. BMC genomics. 2007 Nov; 8(?):428. doi: 10.1186/1471-2164-8-428. [PMID: 18034875]
  • Youry Pii, Massimo Crimi, Giorgia Cremonese, Angelo Spena, Tiziana Pandolfini. Auxin and nitric oxide control indeterminate nodule formation. BMC plant biology. 2007 May; 7(?):21. doi: 10.1186/1471-2229-7-21. [PMID: 17488509]
  • Mandira Malhotra, Sheela Srivastava. Targeted engineering of Azospirillum brasilense SM with indole acetamide pathway for indoleacetic acid over-expression. Canadian journal of microbiology. 2006 Nov; 52(11):1078-84. doi: 10.1139/w06-071. [PMID: 17215899]
  • S Pollmann, A Müller, E W Weiler. Many roads lead to 'auxin': of nitrilases, synthases, and amidases. Plant biology (Stuttgart, Germany). 2006 May; 8(3):326-33. doi: 10.1055/s-2006-924075. [PMID: 16807824]
  • Marie Umber, Bernadette Clément, Léon Otten. The T-DNA oncogene A4-orf8 from Agrobacterium rhizogenes A4 induces abnormal growth in tobacco. Molecular plant-microbe interactions : MPMI. 2005 Mar; 18(3):205-11. doi: 10.1094/mpmi-18-0205. [PMID: 15782634]
  • J De Meutter, T Tytgat, E Prinsen, G Gheysen, H Van Onckelen, G Gheysen. Production of auxin and related compounds by the plant parasitic nematodes Heterodera schachtii and Meloidogyne incognita. Communications in agricultural and applied biological sciences. 2005; 70(1):51-60. doi: . [PMID: 16363359]
  • Yoshitaka Arai, Masayoshi Kawaguchi, Kunihiko Syono, Akira Ikuta. Partial purification of an enzyme hydrolyzing indole-3-acetamide from rice cells. Journal of plant research. 2004 Jun; 117(3):191-8. doi: 10.1007/s10265-004-0146-6. [PMID: 15042416]
  • Bruno Mezzetti, Lucia Landi, Tiziana Pandolfini, Angelo Spena. The defH9-iaaM auxin-synthesizing gene increases plant fecundity and fruit production in strawberry and raspberry. BMC biotechnology. 2004 Mar; 4(?):4. doi: 10.1186/1472-6750-4-4. [PMID: 15113427]
  • Rudy Maor, Sefi Haskin, Hagit Levi-Kedmi, Amir Sharon. In planta production of indole-3-acetic acid by Colletotrichum gloeosporioides f. sp. aeschynomene. Applied and environmental microbiology. 2004 Mar; 70(3):1852-4. doi: 10.1128/aem.70.3.1852-1854.2004. [PMID: 15006816]
  • A Khalid, M Arshad, Z A Zahir. Screening plant growth-promoting rhizobacteria for improving growth and yield of wheat. Journal of applied microbiology. 2004; 96(3):473-80. doi: 10.1046/j.1365-2672.2003.02161.x. [PMID: 14962127]
  • Toru Shimazu, Kensuke Miyamoto, Junichi Ueda. Growth and development, and auxin polar transport of transgenic Arabidopsis under simulated microgravity conditions on a three-dimensional clinostat. Uchu Seibutsu Kagaku. 2003 Dec; 17(4):288-92. doi: 10.2187/bss.17.288. [PMID: 15136750]
  • Kuang Ren Chung, Turksen Shilts, Umran Ertürk, L W Timmer, Peter P Ueng. Indole derivatives produced by the fungus Colletotrichum acutatum causing lime anthracnose and postbloom fruit drop of citrus. FEMS microbiology letters. 2003 Sep; 226(1):23-30. doi: 10.1016/s0378-1097(03)00605-0. [PMID: 13129603]
  • Stephan Pollmann, Daniel Neu, Elmar W Weiler. Molecular cloning and characterization of an amidase from Arabidopsis thaliana capable of converting indole-3-acetamide into the plant growth hormone, indole-3-acetic acid. Phytochemistry. 2003 Feb; 62(3):293-300. doi: 10.1016/s0031-9422(02)00563-0. [PMID: 12620340]
  • Stephan Pollmann, Axel Müller, Markus Piotrowski, Elmar W Weiler. Occurrence and formation of indole-3-acetamide in Arabidopsis thaliana. Planta. 2002 Nov; 216(1):155-61. doi: 10.1007/s00425-002-0868-4. [PMID: 12430025]
  • Marie Umber, Lars Voll, Andreas Weber, Pierre Michler, Léon Otten. The rolB-like part of the Agrobacterium rhizogenes orf8 gene inhibits sucrose export in tobacco. Molecular plant-microbe interactions : MPMI. 2002 Sep; 15(9):956-62. doi: 10.1094/mpmi.2002.15.9.956. [PMID: 12236602]
  • Süreyya Olgen, Tülay Coban. Synthesis and antioxidant properties of novel N-substituted indole-2-carboxamide and indole-3-acetamide derivatives. Archiv der Pharmazie. 2002 Jul; 335(7):331-8. doi: 10.1002/1521-4184(200209)335:7<331::aid-ardp331>3.0.co;2-7. [PMID: 12207283]
  • Barry A Cohen, Ziva Amsellem, Rudy Maor, Amir Sharon, Jonathan Gressel. Transgenically enhanced expression of indole-3-acetic Acid confers hypervirulence to plant pathogens. Phytopathology. 2002 Jun; 92(6):590-6. doi: 10.1094/phyto.2002.92.6.590. [PMID: 18944254]
  • Tiziana Pandolfini, Giuseppe L Rotino, Serena Camerini, Roberto Defez, Angelo Spena. Optimisation of transgene action at the post-transcriptional level: high quality parthenocarpic fruits in industrial tomatoes. BMC biotechnology. 2002; 2(?):1. doi: 10.1186/1472-6750-2-1. [PMID: 11818033]
  • L Otten, A Helfer. Biological activity of the rolB-like 5' end of the A4-orf8 gene from the Agrobacterium rhizogenes TL-DNA. Molecular plant-microbe interactions : MPMI. 2001 Mar; 14(3):405-11. doi: 10.1094/mpmi.2001.14.3.405. [PMID: 11277438]
  • T Shimazu, K Miyamoto, J Ueda. [Effect of simulated microgravity conditions on auxin polar transport of transgenic Arabidopsis]. Uchu Seibutsu Kagaku. 2000 Oct; 14(3):270-1. doi: ". [PMID: 12561874]
  • K Lemcke, E Prinsen, H van Onckelen, T Schmülling. The ORF8 gene product of Agrobacterium rhizogenes TL-DNA has tryptophan 2-monooxygenase activity. Molecular plant-microbe interactions : MPMI. 2000 Jul; 13(7):787-90. doi: 10.1094/mpmi.2000.13.7.787. [PMID: 10875340]
  • J F Hall, S J Brown, K M Gartland. IAA analysis in transgenic plants. Methods in molecular biology (Clifton, N.J.). 1995; 44(?):237-44. doi: 10.1385/0-89603-302-3:237. [PMID: 7581669]
  • Shulamit Manulis, Hadas Shafrir, Ephraim Epstein, Amnon Lichter, Isaac Barash. Biosynthesis of indole-3-acetic acid via the indole-3-acetamide pathway in Streptomyces spp. Microbiology (Reading, England). 1994 May; 140 ( Pt 5)(?):1045-1050. doi: 10.1099/13500872-140-5-1045. [PMID: 8025670]
  • N V Fedoroff, D L Smith. A versatile system for detecting transposition in Arabidopsis. The Plant journal : for cell and molecular biology. 1993 Feb; 3(2):273-89. doi: 10.1111/j.1365-313x.1993.tb00178.x. [PMID: 8220445]
  • G A Karlin-Neumann, J A Brusslan, E M Tobin. Phytochrome control of the tms2 gene in transgenic Arabidopsis: a strategy for selecting mutants in the signal transduction pathway. The Plant cell. 1991 Jun; 3(6):573-82. doi: 10.1105/tpc.3.6.573. [PMID: 1841718]
  • B Tinland, C Kares, A Herrmann, L Otten. 35S-beta-glucuronidase gene blocks biological effects of cotransferred iaa genes. Plant molecular biology. 1991 May; 16(5):853-64. doi: 10.1007/bf00015077. [PMID: 1859868]
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