trans-zeatin riboside (BioDeep_00000003491)

 

Secondary id: BioDeep_00000017699, BioDeep_00000018619, BioDeep_00000398275, BioDeep_00000616275

natural product human metabolite PANOMIX_OTCML-2023 BioNovoGene_Lab2019


代谢物信息卡片


(2R,3R,4S,5R)-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol

化学式: C15H21N5O5 (351.1543)
中文名称: 玉米素核苷, 玉米素核糖甙, 反式玉米素核苷(tZR)
谱图信息: 最多检出来源 Homo sapiens(plant) 17.01%

分子结构信息

SMILES: C/C(=C\CNc1c2c(ncn1)n(cn2)[C@H]1[C@@H]([C@@H]([C@@H](CO)O1)O)O)/CO
InChI: InChI=1S/C15H21N5O5/c1-8(4-21)2-3-16-13-10-14(18-6-17-13)20(7-19-10)15-12(24)11(23)9(5-22)25-15/h2,6-7,9,11-12,15,21-24H,3-5H2,1H3,(H,16,17,18)/b8-2+/t9-,11-,12-,15-/m1/s1

描述信息

Trans-zeatin riboside, also known as (E)-N-(4-hydroxy-3-methyl-2-butenyl)adenosine or 9-beta-D-ribofuranosyl-trans-zeatin, is a member of the class of compounds known as purine nucleosides. Purine nucleosides are compounds comprising a purine base attached to a ribosyl or deoxyribosyl moiety. Trans-zeatin riboside is slightly soluble (in water) and a very weakly acidic compound (based on its pKa). Trans-zeatin riboside can be found in a number of food items such as winter squash, plains prickly pear, dill, and common buckwheat, which makes trans-zeatin riboside a potential biomarker for the consumption of these food products.
D006133 - Growth Substances > D010937 - Plant Growth Regulators > D003583 - Cytokinins
Acquisition and generation of the data is financially supported in part by CREST/JST.
trans-Zeatinriboside is a type of cytokinin precursor, acts as a major long-distance signalling form in xylem vessels, regulates leaf size and meristem activity-related traits.
trans-Zeatinriboside is a type of cytokinin precursor, acts as a major long-distance signalling form in xylem vessels, regulates leaf size and meristem activity-related traits.
trans-Zeatinriboside is a type of cytokinin precursor, acts as a major long-distance signalling form in xylem vessels, regulates leaf size and meristem activity-related traits.

同义名列表

36 个代谢物同义名

(2R,3R,4S,5R)-2-(6-{[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]amino}-9H-purin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol; 6-(4-Hydroxy-3-methyl-trans-2-butenylamino)-9-beta-D-ribofuranosylpurine; 6-(4-Hydroxy-3-methyl-trans-2-butenylamino)-9-β-D-ribofuranosylpurine; N-[(2E)-4-Hydroxy-3-methyl-2-buten-1-yl]adenosine; N6-(4-Hydroxy-3-methylbut-2-trans-enyl)adenosine; N6-(trans-4-Hydroxy-3-methylbut-2-enyl)adenosine; (E)-N-(4-Hydroxy-3-methyl-2-butenyl)adenosine; N-(4-hydroxy-3-methyl-2-butenyl)adenosine; trans-zeatin 9-beta-D-ribofuranoside; 9-beta-D-ribofuranosyl-trans-zeatin; trans-Zeatin 9-b-D-ribofuranoside; trans-Zeatin 9-β-D-ribofuranoside; zeatin riboside, (cis-(Z))-isomer; 9-Β-D-ribofuranosyl-trans-zeatin; 9-b-D-Ribofuranosyl-trans-zeatin; Zeatin-9-beta-D-ribofuranoside; 9-beta-D-ribosyl-trans-zeatin; 9-beta-D-Ribofuranosylzeatin; Zeatin 9-beta-ribonucleoside; Zeatin-9-β-D-ribofuranoside; zeatin riboside, (E)-isomer; 9-Β-D-ribosyl-trans-zeatin; 9-b-D-Ribosyl-trans-zeatin; Zeatin 9-β-ribonucleoside; 9-β-D-Ribofuranosylzeatin; trans-Zeatin 9-riboside; 9-Ribosyl-trans-zeatin; Trans-zeatin riboside; Zeatin ribonucleoside; trans-Zeatin-riboside; Ribosyl-trans-zeatin; Zeatin 9-riboside; Zeatin riboside; 9-ribosylzeatin; ribosylzeatin; trans-Zeatinriboside



数据库引用编号

26 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(1)

代谢反应

128 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(2)

WikiPathways(0)

Plant Reactome(9)

INOH(0)

PlantCyc(116)

COVID-19 Disease Map(0)

PathBank(1)

  • Cytokinins Degradation: FAD + Hydrogen Ion + N6-dimethylallyladenine + Water ⟶ 3-Methyl-2-butenal + Adenine + FADH

PharmGKB(0)

103 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 8 ABI2, ARHGAP45, ARR3, CAT, CPN1, IPP, MATK, RGP1
Nucleus 5 ABI2, CPN1, DET1, KRT4, PRR7
cytosol 11 ABI2, ARHGAP45, CAT, CPN1, GSR, KRT3, KRT4, MATK, PRR7, RGP1, SHC2
dendrite 2 ADORA2A, PRR7
nucleoplasm 3 ABI2, CPN1, PRR7
Cell membrane 4 ADORA2A, CPN1, PRR7, SLC26A2
lamellipodium 1 ABI2
ruffle membrane 1 ARHGAP45
Multi-pass membrane protein 2 ADORA2A, SLC26A2
Synapse 2 ARR3, PRR7
cell surface 1 KRT4
glutamatergic synapse 2 ADORA2A, PRR7
Golgi membrane 1 RGP1
neuronal cell body 1 ADORA2A
presynaptic membrane 1 ADORA2A
Cytoplasm, cytosol 1 RGP1
plasma membrane 9 ADORA2A, ARHGAP45, CPN1, MATK, NMUR1, PRR7, RGP1, SHC2, SLC26A2
presynaptic active zone 1 ADORA2A
Membrane 9 ADORA2A, ARHGAP45, CAT, CPN1, MATK, NMUR1, PRR7, RGP1, SLC26A2
apical plasma membrane 1 SLC26A2
extracellular exosome 5 CAT, CPN1, GSR, KRT3, SLC26A2
extracellular space 1 CPN1
perinuclear region of cytoplasm 1 PRR7
adherens junction 1 ABI2
mitochondrion 2 CAT, GSR
protein-containing complex 2 CAT, RGP1
intracellular membrane-bounded organelle 2 ABI2, CAT
filopodium 1 ABI2
extracellular region 3 ARHGAP45, CAT, CPN1
mitochondrial matrix 2 CAT, GSR
photoreceptor inner segment 1 ARR3
photoreceptor outer segment 1 ARR3
nuclear membrane 1 CPN1
external side of plasma membrane 1 GSR
actin cytoskeleton 1 IPP
dendritic spine 1 ABI2
postsynaptic membrane 1 ADORA2A
Apical cell membrane 1 SLC26A2
Cell projection, lamellipodium 1 ABI2
Cell projection, ruffle membrane 1 ARHGAP45
Cytoplasm, perinuclear region 1 PRR7
filopodium tip 1 ABI2
Cytoplasm, cytoskeleton 1 ABI2
focal adhesion 1 CAT
axolemma 1 ADORA2A
Cell junction, adherens junction 1 ABI2
Peroxisome 1 CAT
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
intermediate filament 3 ADORA2A, KRT3, KRT4
Postsynaptic cell membrane 1 PRR7
Cell projection, filopodium 1 ABI2
cilium 1 NMUR1
cytoskeleton 1 ABI2
Cell projection, cilium, photoreceptor outer segment 1 ARR3
postsynaptic density, intracellular component 1 PRR7
microvillus membrane 1 SLC26A2
nuclear pore 1 RGP1
Cell projection, dendrite 1 PRR7
intermediate filament cytoskeleton 1 KRT4
trans-Golgi network membrane 1 RGP1
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 2 ARHGAP45, CAT
azurophil granule membrane 1 CPN1
Single-pass type III membrane protein 1 PRR7
azurophil granule lumen 1 ARHGAP45
postsynaptic density membrane 1 PRR7
keratin filament 2 KRT3, KRT4
catalase complex 1 CAT
asymmetric synapse 1 ADORA2A
Cul4A-RING E3 ubiquitin ligase complex 1 DET1
SCAR complex 1 ABI2
Cul4-RING E3 ubiquitin ligase complex 1 DET1
cullin-RING ubiquitin ligase complex 1 DET1
Ric1-Rgp1 guanyl-nucleotide exchange factor complex 1 RGP1
actin-based cell projection 1 ABI2
[Isoform 1]: Cell projection, lamellipodium 1 ABI2


文献列表

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