D-ribulose-1,5-bisphosphate (BioDeep_00000003418)
Secondary id: BioDeep_00000413273
natural product human metabolite PANOMIX_OTCML-2023
代谢物信息卡片
{[(3R,4R)-3,4-dihydroxy-2-oxo-5-(phosphonooxy)pentyl]oxy}phosphonic acid
化学式: C5H12O11P2 (309.9855)
中文名称:
谱图信息:
最多检出来源 Homo sapiens(plant) 17.17%
分子结构信息
SMILES: C(C(C(C(=O)COP(=O)(O)O)O)O)OP(=O)(O)O
InChI: InChI=1S/C5H12O11P2/c6-3(1-15-17(9,10)11)5(8)4(7)2-16-18(12,13)14/h3,5-6,8H,1-2H2,(H2,9,10,11)(H2,12,13,14)/t3-,5-/m1/s1
描述信息
D-ribulose-1,5-bisphosphate, also known as ribulose-1,5-diphosphoric acid or ribulose-1,5 diphosphate, (D)-isomer, is a member of the class of compounds known as pentose phosphates. Pentose phosphates are carbohydrate derivatives containing a pentose substituted by one or more phosphate groups. D-ribulose-1,5-bisphosphate is soluble (in water) and a moderately acidic compound (based on its pKa). D-ribulose-1,5-bisphosphate can be found in a number of food items such as bamboo shoots, bog bilberry, chestnut, and other cereal product, which makes D-ribulose-1,5-bisphosphate a potential biomarker for the consumption of these food products. D-ribulose-1,5-bisphosphate may be a unique E.coli metabolite. Ribulose 1,5-bisphosphate (RuBP) is an organic substance that is involved in photosynthesis. It is a colourless anion, a double phosphate ester of the ketopentose (ketone-containing sugar with five carbon atoms) called ribulose. Salts of RuBP can be isolated, but its crucial biological function happens in solution. To simplify the presentation, the image in the above table depicts the acid form of this anion .
KEIO_ID R005
同义名列表
14 个代谢物同义名
{[(3R,4R)-3,4-dihydroxy-2-oxo-5-(phosphonooxy)pentyl]oxy}phosphonic acid; D-Ribulose 1,5-diphosphate barium salt hydrate; Ribulose-1,5 diphosphate, (D)-isomer; D-Ribulose 1,5-bisphosphoric acid; D-Ribulose-1,5-bisphosphoric acid; RIBULOSE-1,5-diphosphoric acid; D-ribulose-1,5-bisphosphate; D-Ribulose 1,5-bisphosphate; Ribulose-1,5-bisphosphate; ribulose-1,5-bisphosphat; Ribulose 1,5-diphosphate; RIBULOSE-1,5-diphosphATE; Ribulose-1,5 diphosphate; D-Ribulose 1,5-bisphosphate
数据库引用编号
26 个数据库交叉引用编号
- ChEBI: CHEBI:16710
- KEGG: C01182
- PubChem: 123658
- PubChem: 1192
- HMDB: HMDB0304322
- Metlin: METLIN63255
- Metlin: METLIN377
- Wikipedia: Ribulose-1,5-bisphosphate
- MetaCyc: D-RIBULOSE-15-P2
- KNApSAcK: C00007293
- foodb: FDB030796
- chemspider: 110238
- CAS: 24218-00-6
- CAS: 2002-28-0
- MoNA: KO001756
- MoNA: KO001758
- MoNA: KO001755
- MoNA: KO001759
- MoNA: PS069005
- MoNA: KO001757
- PMhub: MS000009646
- PubChem: 4409
- PDB-CCD: RUB
- 3DMET: B04779
- NIKKAJI: J531.240J
- KNApSAcK: 16710
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
2 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(2)
- Photosynthesis:
Fructose 1,6-bisphosphate + Water ⟶ Fructose 6-phosphate + Phosphate - Calvin-Benson Cycle:
Fructose 1,6-bisphosphate + Water ⟶ Fructose 6-phosphate + Phosphate
PharmGKB(0)
2 个相关的物种来源信息
- 3702 - Arabidopsis thaliana: 10.1074/JBC.274.1.397
- 9606 - Homo sapiens: -
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
文献列表
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