Phenanthrene (BioDeep_00000003289)

 

Secondary id: BioDeep_00001871675

human metabolite PANOMIX_OTCML-2023 blood metabolite Industrial Pollutants natural product


代谢物信息卡片


Phenanthracene

化学式: C14H10 (178.0782)
中文名称: 芘
谱图信息: 最多检出来源 Homo sapiens(blood) 61.6%

Reviewed

Last reviewed on 2024-08-19.

Cite this Page

Phenanthrene. BioDeep Database v3. PANOMIX ltd, a top metabolomics service provider from China. https://query.biodeep.cn/s/phenanthrene (retrieved 2024-12-22) (BioDeep RN: BioDeep_00000003289). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

分子结构信息

SMILES: C12=CC=CC=C1C=CC3=CC=CC=C23
InChI: InChI=1S/C14H10/c1-3-7-13-11(5-1)9-10-12-6-2-4-8-14(12)13/h1-10H

描述信息

Phenanthrene is a polycyclic aromatic hydrocarbon (PAH) and has been frequently used as an indicator for monitoring PAH contaminated matrices[1]. Phenanthrene induces oxidative stress and inflammation[2].

同义名列表

4 个代谢物同义名

Phenanthracene; PHENANTHRENE; Phenanthren; Phenanthrene



数据库引用编号

19 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

26 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 7 AHR, CASP3, CAT, CYP1A1, GPX1, HPGDS, IGF2BP3
Peripheral membrane protein 4 ACHE, CYP1A1, CYP1B1, FDXR
Endoplasmic reticulum membrane 2 CYP1A1, CYP1B1
Nucleus 4 ACHE, AHR, CASP3, IGF2BP3
cytosol 8 AHR, CASP3, CAT, GPT, GPX1, GSR, HPGDS, IGF2BP3
nucleoplasm 5 AHR, ATP2B1, CASP3, CD2, HPGDS
Cell membrane 4 ACHE, ATP2B1, CD2, TNF
Multi-pass membrane protein 2 ATP2B1, SLC45A2
Synapse 2 ACHE, ATP2B1
cell surface 3 ACHE, CD2, TNF
glutamatergic synapse 2 ATP2B1, CASP3
Golgi apparatus 3 ACHE, ATRN, CD2
mitochondrial inner membrane 2 CYP1A1, FDXR
neuromuscular junction 1 ACHE
neuronal cell body 2 CASP3, TNF
presynaptic membrane 1 ATP2B1
plasma membrane 5 ACHE, ATP2B1, ATRN, CD2, TNF
synaptic vesicle membrane 1 ATP2B1
Membrane 5 ACHE, ATP2B1, CAT, CYP1B1, SLC45A2
basolateral plasma membrane 1 ATP2B1
extracellular exosome 6 ATP2B1, ATRN, CAT, GPT, GSR, LYZ
extracellular space 5 ACHE, ATRN, IL6, LYZ, TNF
perinuclear region of cytoplasm 1 ACHE
mitochondrion 6 CAT, CYP1A1, CYP1B1, FDXR, GPX1, GSR
protein-containing complex 3 AHR, CAT, CD2
intracellular membrane-bounded organelle 5 ATP2B1, CAT, CYP1A1, CYP1B1, HPGDS
Microsome membrane 2 CYP1A1, CYP1B1
postsynaptic density 1 CASP3
Single-pass type I membrane protein 2 ATRN, CD2
Secreted 2 ACHE, IL6
extracellular region 6 ACHE, CAT, CD2, IL6, LYZ, TNF
cytoplasmic side of plasma membrane 1 CD2
[Isoform 2]: Secreted 1 ATRN
mitochondrial matrix 4 CAT, FDXR, GPX1, GSR
Extracellular side 1 ACHE
transcription regulator complex 1 AHR
Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane 1 ATP2B1
external side of plasma membrane 3 CD2, GSR, TNF
Melanosome membrane 1 SLC45A2
Cytoplasm, P-body 1 IGF2BP3
P-body 1 IGF2BP3
cell-cell junction 1 CD2
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
Mitochondrion inner membrane 2 CYP1A1, FDXR
Membrane raft 1 TNF
focal adhesion 1 CAT
Peroxisome 1 CAT
basement membrane 1 ACHE
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
lateral plasma membrane 1 ATP2B1
chromatin 1 AHR
cell projection 1 ATP2B1
phagocytic cup 1 TNF
Basolateral cell membrane 1 ATP2B1
Lipid-anchor, GPI-anchor 1 ACHE
[Isoform 3]: Secreted 1 ATRN
aryl hydrocarbon receptor complex 1 AHR
Cytoplasm, Stress granule 1 IGF2BP3
cytoplasmic stress granule 1 IGF2BP3
Presynaptic cell membrane 1 ATP2B1
side of membrane 1 ACHE
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 1 CAT
endoplasmic reticulum lumen 1 IL6
specific granule lumen 1 LYZ
tertiary granule lumen 1 LYZ
azurophil granule lumen 1 LYZ
immunological synapse 1 ATP2B1
synaptic cleft 1 ACHE
death-inducing signaling complex 1 CASP3
[Isoform 1]: Cell membrane 1 ATRN
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
catalase complex 1 CAT
interleukin-6 receptor complex 1 IL6
photoreceptor ribbon synapse 1 ATP2B1
[Isoform H]: Cell membrane 1 ACHE
nuclear aryl hydrocarbon receptor complex 1 AHR
cytosolic aryl hydrocarbon receptor complex 1 AHR
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • David Chung, Tae Kyung Kim, Ki Wan Park, Yun-Suk Oh, Ho-Sang Shin. Distribution of 35 Polycyclic Aromatic Hydrocarbons in Pine Needle Samples from Selected Locations in the Republic of Korea. Bulletin of environmental contamination and toxicology. 2024 May; 112(5):74. doi: 10.1007/s00128-024-03887-w. [PMID: 38733375]
  • Dan A, Yifei Zhang, Hanjie Huang, Yuan Pan, Hong J Di, Yunqiang Yi, Xiaomeng Zhang, Jiewen Yang. Unraveling the mechanism of interaction: accelerated phenanthrene degradation and rhizosphere biofilm/iron plaque formation influenced by phenolic root exudates. Environmental science and pollution research international. 2024 May; 31(24):35853-35863. doi: 10.1007/s11356-024-33349-z. [PMID: 38743334]
  • Xinya Su, Ruju Zhang, Huan Cao, Daichen Mu, Liqin Wang, Caihong Song, Zimin Wei, Yue Zhao. Adsorption of humic acid from different organic solid waste compost to phenanthrene, is fluorescence excitation or quenching?. Environmental pollution (Barking, Essex : 1987). 2024 Apr; 347(?):123712. doi: 10.1016/j.envpol.2024.123712. [PMID: 38460593]
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