1-Deoxy-D-xylulose 5-phosphate (BioDeep_00001871513)
Main id: BioDeep_00000008653
代谢物信息卡片
(2,3-dihydroxy-4-oxo-pentoxy)phosphonic acid
化学式: C5H11O7P (214.0242)
中文名称: DXP 钠盐
谱图信息:
最多检出来源 not specific(not specific) 0%
分子结构信息
SMILES: CC(=O)C(C(COP(=O)(O)O)O)O
InChI: InChI=1S/C5H11O7P/c1-3(6)5(8)4(7)2-12-13(9,10)11/h4-5,7-8H,2H2,1H3,(H2,9,10,11)/t4-,5-/m1/s1
描述信息
The 5-phospho derivative of 1-deoxy-D-xylulose.
同义名列表
数据库引用编号
13 个数据库交叉引用编号
- ChEBI: CHEBI:16493
- KEGG: C11437
- PubChem: 443201
- DrugBank: DB02496
- ChEMBL: CHEMBL1232414
- KNApSAcK: C00007292
- CAS: 190079-18-6
- MetaboLights: MTBLC16493
- PubChem: 13609
- PDB-CCD: DXP
- 3DMET: B04265
- NIKKAJI: J866.535D
- RefMet: 1-Deoxy-D-xylulose 5-phosphate
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
4 个相关的物种来源信息
- 3702 - Arabidopsis thaliana: 10.1007/S00425-002-0762-0
- 4686 - Asparagus officinalis: 10.1371/JOURNAL.PONE.0219973
- 1883 - Streptomyces: 10.1128/JB.182.4.891-897.2000
- 32046 - Synechococcus elongatus: 10.1111/1462-2920.12899
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：
- PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。
文献列表
- Yueyang Wang, Yue Li, Huiyun Song, Zhi Wang, Pei Li. Characterization of the 1-Deoxy-D-xylulose 5-Phosphate synthase Genes in Toona ciliata Suggests Their Role in Insect Defense.
International journal of molecular sciences.
2023 Jan; 24(3):. doi:
10.3390/ijms24032339. [PMID: 36768662] - Bin Liu, Lu Zhang, Linda Rusalepp, Eve Kaurilind, Hassan Yusuf Sulaiman, Tõnu Püssa, Ülo Niinemets. Heat priming improved heat tolerance of photosynthesis, enhanced terpenoid and benzenoid emission and phenolics accumulation in Achillea millefolium.
Plant, cell & environment.
2021 07; 44(7):2365-2385. doi:
10.1111/pce.13830. [PMID: 32583881] - Rong Li, Peizhen Chen, Lingzhi Zhu, Fan Wu, Yu Chen, Peihuang Zhu, Kongshu Ji. Characterization and Function of the 1-Deoxy-D-xylose-5-Phosphate Synthase (DXS) Gene Related to Terpenoid Synthesis in Pinus massoniana.
International journal of molecular sciences.
2021 Jan; 22(2):. doi:
10.3390/ijms22020848. [PMID: 33467778] - Youping Zhou, Hilary Stuart-Williams, Kliti Grice, Zachary E Kayler, Saša Zavadlav, Angela Vogts, Florian Rommerskirchen, Graham D Farquhar, Arthur Gessler. Allocate carbon for a reason: priorities are reflected in the ¹³C/¹²C ratios of plant lipids synthesized via three independent biosynthetic pathways.
Phytochemistry.
2015 Mar; 111(?):14-20. doi:
10.1016/j.phytochem.2014.12.005. [PMID: 25576502] - James Kirby, Minobu Nishimoto, Ruthie W N Chow, Edward E K Baidoo, George Wang, Joel Martin, Wendy Schackwitz, Rossana Chan, Jeffrey L Fortman, Jay D Keasling. Enhancing Terpene yield from sugars via novel routes to 1-deoxy-d-xylulose 5-phosphate.
Applied and environmental microbiology.
2015 Jan; 81(1):130-8. doi:
10.1128/aem.02920-14. [PMID: 25326299] - Bianca May, B Markus Lange, Matthias Wüst. Biosynthesis of sesquiterpenes in grape berry exocarp of Vitis vinifera L.: evidence for a transport of farnesyl diphosphate precursors from plastids to the cytosol.
Phytochemistry.
2013 Nov; 95(?):135-44. doi:
10.1016/j.phytochem.2013.07.021. [PMID: 23954075] - Lorenzo Carretero-Paulet, Albert Cairó, David Talavera, Andreu Saura, Santiago Imperial, Manuel Rodríguez-Concepción, Narciso Campos, Albert Boronat. Functional and evolutionary analysis of DXL1, a non-essential gene encoding a 1-deoxy-D-xylulose 5-phosphate synthase like protein in Arabidopsis thaliana.
Gene.
2013 Jul; 524(1):40-53. doi:
10.1016/j.gene.2012.10.071. [PMID: 23154062] - Andréa Hemmerlin, John L Harwood, Thomas J Bach. A raison d'être for two distinct pathways in the early steps of plant isoprenoid biosynthesis?.
Progress in lipid research.
2012 Apr; 51(2):95-148. doi:
10.1016/j.plipres.2011.12.001. [PMID: 22197147] - Sethu C Nair, Carrie F Brooks, Christopher D Goodman, Angelika Sturm, Angelika Strurm, Geoffrey I McFadden, Sandeep Sundriyal, Justin L Anglin, Yongcheng Song, Silvia N J Moreno, Boris Striepen. Apicoplast isoprenoid precursor synthesis and the molecular basis of fosmidomycin resistance in Toxoplasma gondii.
The Journal of experimental medicine.
2011 Jul; 208(7):1547-59. doi:
10.1084/jem.20110039. [PMID: 21690250] - Alexander Lane, Astrid Boecklemann, Grant N Woronuk, Lukman Sarker, Soheil S Mahmoud. A genomics resource for investigating regulation of essential oil production in Lavandula angustifolia.
Planta.
2010 Mar; 231(4):835-45. doi:
10.1007/s00425-009-1090-4. [PMID: 20043174] - Lilla Margl, Christian Ettenhuber, István Gyurján, Meinhart H Zenk, Adelbert Bacher, Wolfgang Eisenreich. Biosynthesis of benzofuran derivatives in root cultures of Tagetes patula via phenylalanine and 1-deoxy-D-xylulose 5-phosphate.
Phytochemistry.
2005 Apr; 66(8):887-99. doi:
10.1016/j.phytochem.2005.02.022. [PMID: 15845407] - U-I Flügge, W Gao. Transport of isoprenoid intermediates across chloroplast envelope membranes.
Plant biology (Stuttgart, Germany).
2005 Jan; 7(1):91-7. doi:
10.1055/s-2004-830446. [PMID: 15666208] - Jonathan E Page, Gerd Hause, Maja Raschke, Wenyun Gao, Jürgen Schmidt, Meinhart H Zenk, Toni M Kutchan. Functional analysis of the final steps of the 1-deoxy-D-xylulose 5-phosphate (DXP) pathway to isoprenoids in plants using virus-induced gene silencing.
Plant physiology.
2004 Apr; 134(4):1401-13. doi:
10.1104/pp.103.038133. [PMID: 15064370] - Seung-Beom Hong, Erik H Hughes, Jacqueline V Shanks, Ka-Yiu San, Susan I Gibson. Role of the non-mevalonate pathway in indole alkaloid production by Catharanthus roseus hairy roots.
Biotechnology progress.
2003 May; 19(3):1105-8. doi:
10.1021/bp034031k. [PMID: 12790690] - J Schwender, C Gemünden, H K Lichtenthaler. Chlorophyta exclusively use the 1-deoxyxylulose 5-phosphate/2-C-methylerythritol 4-phosphate pathway for the biosynthesis of isoprenoids.
Planta.
2001 Feb; 212(3):416-23. doi:
10.1007/s004250000409. [PMID: 11289606] - F X Cunningham, T P Lafond, E Gantt. Evidence of a role for LytB in the nonmevalonate pathway of isoprenoid biosynthesis.
Journal of bacteriology.
2000 Oct; 182(20):5841-8. doi:
10.1128/jb.182.20.5841-5848.2000. [PMID: 11004185] - A Smit, A Mushegian. Biosynthesis of isoprenoids via mevalonate in Archaea: the lost pathway.
Genome research.
2000 Oct; 10(10):1468-84. doi:
10.1101/gr.145600. [PMID: 11042147] - B M Lange, R Croteau. Isoprenoid biosynthesis via a mevalonate-independent pathway in plants: cloning and heterologous expression of 1-deoxy-D-xylulose-5-phosphate reductoisomerase from peppermint.
Archives of biochemistry and biophysics.
1999 May; 365(1):170-4. doi:
10.1006/abbi.1999.1168. [PMID: 10222052] - G A Sprenger, U Schörken, T Wiegert, S Grolle, A A de Graaf, S V Taylor, T P Begley, S Bringer-Meyer, H Sahm. Identification of a thiamin-dependent synthase in Escherichia coli required for the formation of the 1-deoxy-D-xylulose 5-phosphate precursor to isoprenoids, thiamin, and pyridoxol.
Proceedings of the National Academy of Sciences of the United States of America.
1997 Nov; 94(24):12857-62. doi:
10.1073/pnas.94.24.12857. [PMID: 9371765] - P Labrude, B Teisseire, C Vigneron. Attempts to use carbodiimide (EDCI) to cross-link hemoglobin for transfusions.
Experientia.
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