Pentose (BioDeep_00001872410)
代谢物信息卡片
化学式: C5H10O5 (150.052821)
中文名称: L-阿拉伯糖
谱图信息:
最多检出来源 () 0%
分子结构信息
SMILES: C1C(C(C(C(O1)O)O)O)O
InChI: InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2
数据库引用编号
22 个数据库交叉引用编号
- ChEBI: CHEBI:131402
- ChEBI: CHEBI:25901
- PubChem: 229
- ChEMBL: CHEMBL14343
- MeSH: Pentoses
- CAS: 1132639-46-3
- CAS: 202114-47-4
- CAS: 178101-87-6
- CAS: 478506-63-7
- CAS: 478506-58-0
- CAS: 209909-88-6
- CAS: 478506-32-0
- CAS: 139657-62-8
- CAS: 131771-69-2
- CAS: 478506-29-5
- CAS: 211947-12-5
- CAS: 213825-56-0
- CAS: 201741-00-6
- CAS: 57066-79-2
- CAS: 50986-18-0
- CAS: 70849-21-7
- CAS: 87-72-9
分类词条
相关代谢途径
Reactome(0)
BioCyc(0)
PlantCyc(0)
代谢反应
0 个相关的代谢反应过程信息。
Reactome(0)
BioCyc(0)
WikiPathways(0)
Plant Reactome(0)
INOH(0)
PlantCyc(0)
COVID-19 Disease Map(0)
PathBank(0)
PharmGKB(0)
0 个相关的物种来源信息
在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:
- PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
- NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
- Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
- Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。
点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。
文献列表
- Jie Zhou, Suxian Xu, Hu Li, Huachao Xi, Wenbo Cheng, Chen Yang. A Ribulose-5-phosphate Shunt from the Calvin-Benson Cycle to Methylerythritol Phosphate Pathway for Enhancing Photosynthetic Terpenoid Production.
ACS synthetic biology.
2024 Mar; 13(3):876-887. doi:
10.1021/acssynbio.3c00675
. [PMID: 38362836] - Maria Meloni, Silvia Fanti, Daniele Tedesco, Libero Gurrieri, Paolo Trost, Simona Fermani, Stéphane D Lemaire, Mirko Zaffagnini, Julien Henri. Characterization of chloroplast ribulose-5-phosphate-3-epimerase from the microalga Chlamydomonas reinhardtii.
Plant physiology.
2023 Dec; ?(?):. doi:
10.1093/plphys/kiad680
. [PMID: 38134324] - Yun Bai, Haihang Yu, Lifei Chen, Yuan Meng, Yanmei Ma, Di Wang, Ying Qian, Dongyang Zhang, Xiaoyu Feng, Yunwei Zhou. Time-Course Transcriptome Analysis of Aquilegia vulgaris Root Reveals the Cell Wall's Roles in Salinity Tolerance.
International journal of molecular sciences.
2023 Nov; 24(22):. doi:
10.3390/ijms242216450
. [PMID: 38003641] - Samuel T Coradetti, Paul A Adamczyk, Di Liu, Yuqian Gao, Peter B Otoupal, Gina M Geiselman, Bobbie-Jo M Webb-Robertson, Meagan C Burnet, Young-Mo Kim, Kristin E Burnum-Johnson, Jon Magnuson, John M Gladden. Engineering transcriptional regulation of pentose metabolism in Rhodosporidium toruloides for improved conversion of xylose to bioproducts.
Microbial cell factories.
2023 Aug; 22(1):144. doi:
10.1186/s12934-023-02148-5
. [PMID: 37537586] - Paul A Adamczyk, Samuel T Coradetti, John M Gladden. Non-canonical D-xylose and L-arabinose metabolism via D-arabitol in the oleaginous yeast Rhodosporidium toruloides.
Microbial cell factories.
2023 Aug; 22(1):145. doi:
10.1186/s12934-023-02126-x
. [PMID: 37537595] - Kun Wang, Xujie Cui, Xiaocui Ling, Jiarui Chen, Jiachen Zheng, Yuling Xiang, Weihui Li. D-Xylose Blocks the Broad Negative Regulation of XylR on Lipid Metabolism and Affects Multiple Physiological Characteristics in Mycobacteria.
International journal of molecular sciences.
2023 Apr; 24(8):. doi:
10.3390/ijms24087086
. [PMID: 37108247] - Shang-Ting Tsai, Hsu-Chen Hsu, Chi-Kung Ni. A simple tandem mass spectrometry method for structural identification of pentose oligosaccharides.
The Analyst.
2023 Apr; 148(8):1712-1731. doi:
10.1039/d3an00068k
. [PMID: 36929945] - Ronivaldo Rodrigues da Silva, Mohammed Anas Zaiter, Maurício Boscolo, Roberto da Silva, Eleni Gomes. Xylose consumption and ethanol production by Pichia guilliermondii and Candida oleophila in the presence of furans, phenolic compounds, and organic acids commonly produced during the pre-treatment of plant biomass.
Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology].
2023 Feb; ?(?):. doi:
10.1007/s42770-023-00937-z
. [PMID: 36826705] - Mee-Rye Park, Rahul Gauttam, Bonnie Fong, Yan Chen, Hyun Gyu Lim, Adam M Feist, Aindrila Mukhopadhyay, Christopher J Petzold, Blake A Simmons, Steven W Singer. Revealing oxidative pentose metabolism in new Pseudomonas putida isolates.
Environmental microbiology.
2023 Feb; 25(2):493-504. doi:
10.1111/1462-2920.16296
. [PMID: 36465038] - Hesbon Ochieng Obel, Chunyan Cheng, Zhen Tian, Martin Kagiki Njogu, Ji Li, Shengli Du, Qunfeng Lou, Junguo Zhou, Xiaqing Yu, Joshua Otieno Ogweno, Jinfeng Chen. Transcriptomic and Physiological Analyses Reveal Potential Genes Involved in Photoperiod-Regulated β-Carotene Accumulation Mechanisms in the Endocarp of Cucumber (Cucumis sativus L.) Fruit.
International journal of molecular sciences.
2022 Oct; 23(20):. doi:
10.3390/ijms232012650
. [PMID: 36293506] - Robyn M Moses, Katherine M Halloran, Claire Stenhouse, Nirvay Sah, Avery C Kramer, Bryan A McLendon, Heewon Seo, Gregory A Johnson, Guoyao Wu, Fuller W Bazer. Ovine conceptus tissue metabolizes fructose for metabolic support during the peri-implantation period of pregnancy†.
Biology of reproduction.
2022 10; 107(4):1084-1096. doi:
10.1093/biolre/ioac144
. [PMID: 35835585] - Christine A Raines. Improving plant productivity by re-tuning the regeneration of RuBP in the Calvin-Benson-Bassham cycle.
The New phytologist.
2022 10; 236(2):350-356. doi:
10.1111/nph.18394
. [PMID: 35860861] - Qi Shen, Xiaonan Wu, Yongxia Tao, Guorong Yan, Xian Wang, Shuangyu Cao, Cheng Wang, Weizhong He. Mining Candidate Genes Related to Heavy Metals in Mature Melon (Cucumis melo L.) Peel and Pulp Using WGCNA.
Genes.
2022 Sep; 13(10):. doi:
10.3390/genes13101767
. [PMID: 36292652] - Juan A Salazar, David Ruiz, Patricio Zapata, Pedro J Martínez-García, Pedro Martínez-Gómez. Whole Transcriptome Analyses of Apricots and Japanese Plum Fruits after 1-MCP (Ethylene-Inhibitor) and Ethrel (Ethylene-Precursor) Treatments Reveal New Insights into the Physiology of the Ripening Process.
International journal of molecular sciences.
2022 Sep; 23(19):. doi:
10.3390/ijms231911045
. [PMID: 36232348] - Philipp Keller, Michael A Reiter, Patrick Kiefer, Thomas Gassler, Lucas Hemmerle, Philipp Christen, Elad Noor, Julia A Vorholt. Generation of an Escherichia coli strain growing on methanol via the ribulose monophosphate cycle.
Nature communications.
2022 09; 13(1):5243. doi:
10.1038/s41467-022-32744-9
. [PMID: 36068201] - Tania Chroumpi, Mao Peng, Maria Victoria Aguilar-Pontes, Astrid Müller, Mei Wang, Juying Yan, Anna Lipzen, Vivian Ng, Igor V Grigoriev, Miia R Mäkelä, Ronald P de Vries. Revisiting a 'simple' fungal metabolic pathway reveals redundancy, complexity and diversity.
Microbial biotechnology.
2021 11; 14(6):2525-2537. doi:
10.1111/1751-7915.13790
. [PMID: 33666344] - Justyna Ruchala, Andriy A Sibirny. Pentose metabolism and conversion to biofuels and high-value chemicals in yeasts.
FEMS microbiology reviews.
2021 08; 45(4):. doi:
10.1093/femsre/fuaa069
. [PMID: 33316044] - Lorena Donzella, Javier A Varela, Maria João Sousa, John P Morrissey. Identification of novel pentose transporters in Kluyveromyces marxianus using a new screening platform.
FEMS yeast research.
2021 05; 21(4):. doi:
10.1093/femsyr/foab026
. [PMID: 33890624] - Laura S Garschagen, Thomas Franke, Uwe Deppenmeier. An alternative pentose phosphate pathway in human gut bacteria for the degradation of C5 sugars in dietary fibers.
The FEBS journal.
2021 03; 288(6):1839-1858. doi:
10.1111/febs.15511
. [PMID: 32770699] - Mirko Basen, Sonja Elisabeth Kurrer. A close look at pentose metabolism of gut bacteria.
The FEBS journal.
2021 03; 288(6):1804-1808. doi:
10.1111/febs.15575
. [PMID: 33063458] - Hao Wu, Ming Chen, Cuie Guang, Wenli Zhang, Wanmeng Mu. Identification of a novel recombinant D-lyxose isomerase from Thermoprotei archaeon with high thermostable, weak-acid and nickel ion dependent properties.
International journal of biological macromolecules.
2020 Dec; 164(?):1267-1274. doi:
10.1016/j.ijbiomac.2020.07.222
. [PMID: 32750472] - Vivek S Bharadwaj, Michael F Crowley, Maria J Peña, Breeanna Urbanowicz, Malcolm O'Neill. Mechanism and Reaction Energy Landscape for Apiose Cross-Linking by Boric Acid in Rhamnogalacturonan II.
The journal of physical chemistry. B.
2020 11; 124(45):10117-10125. doi:
10.1021/acs.jpcb.0c06920
. [PMID: 33112619] - Ramkrishna D Singh, Daniel So, C K Yao, Paul Gill, Naresh Pillai, Jane Muir, Amit Arora. Production and faecal fermentation of pentose oligomers of hemicellulose: Study of variables influencing bioprocess efficiency.
Food chemistry.
2019 Nov; 297(?):124945. doi:
10.1016/j.foodchem.2019.06.012
. [PMID: 31253310] - Siyun Lu, Heping Cui, Huan Zhan, Khizar Hayat, Chengsheng Jia, Shahzad Hussain, Muhammad Usman Tahir, Xiaoming Zhang, Chi-Tang Ho. Timely Addition of Glutathione for Its Interaction with Deoxypentosone To Inhibit the Aqueous Maillard Reaction and Browning of Glycylglycine-Arabinose System.
Journal of agricultural and food chemistry.
2019 Jun; 67(23):6585-6593. doi:
10.1021/acs.jafc.9b02053
. [PMID: 31124366] - Peng-Fei Wang, Yan-Ping Li, Li-Qin Ding, Shi-Jie Cao, Li-Ning Wang, Feng Qiu. Six New Methyl Apiofuranosides from the Bark of Phellodendron chinense Schneid and Their Inhibitory Effects on Nitric Oxide Production.
Molecules (Basel, Switzerland).
2019 May; 24(10):. doi:
10.3390/molecules24101851
. [PMID: 31091775] - Rayane Brinck Teixeira, Tânia Regina Gattelli Fernandes-Piedras, Adriane Belló-Klein, Cristina Campos Carraro, Alex Sander da Rosa Araujo. An early stage in T4-induced hyperthyroidism is related to systemic oxidative stress but does not influence the pentose cycle in erythrocytes and systemic inflammatory status.
Archives of endocrinology and metabolism.
2019 May; 63(3):228-234. doi:
10.20945/2359-3997000000128
. [PMID: 31038595] - Arup Jyoti Borah, Mayank Agarwal, Arun Goyal, Vijayanand S Moholkar. Physical insights of ultrasound-assisted ethanol production from composite feedstock of invasive weeds.
Ultrasonics sonochemistry.
2019 Mar; 51(?):378-385. doi:
10.1016/j.ultsonch.2018.07.046
. [PMID: 30097257] - Arup Jyoti Borah, Kuldeep Roy, Arun Goyal, Vijayanand S Moholkar. Mechanistic investigations in biobutanol synthesis via ultrasound-assisted ABE fermentation using mixed feedstock of invasive weeds.
Bioresource technology.
2019 Jan; 272(?):389-397. doi:
10.1016/j.biortech.2018.10.063
. [PMID: 30388576] - Maninder Kaur, Rajwinder Kaur, Sneh Punia. Characterization of mucilages extracted from different flaxseed (Linum usitatissiumum L.) cultivars: A heteropolysaccharide with desirable functional and rheological properties.
International journal of biological macromolecules.
2018 Oct; 117(?):919-927. doi:
10.1016/j.ijbiomac.2018.06.010
. [PMID: 29874558] - A P A Cassuriaga, B C B Freitas, M G Morais, J A V Costa. Innovative polyhydroxybutyrate production by Chlorella fusca grown with pentoses.
Bioresource technology.
2018 Oct; 265(?):456-463. doi:
10.1016/j.biortech.2018.06.026
. [PMID: 29935455] - Claire Khosravi, Evy Battaglia, Roland S Kun, Sacha Dalhuijsen, Jaap Visser, María Victoria Aguilar-Pontes, Miaomiao Zhou, Heino M Heyman, Young-Mo Kim, Scott E Baker, Ronald P de Vries. Blocking hexose entry into glycolysis activates alternative metabolic conversion of these sugars and upregulates pentose metabolism in Aspergillus nidulans.
BMC genomics.
2018 03; 19(1):214. doi:
10.1186/s12864-018-4609-x
. [PMID: 29566661] - Michaela Wagner, Lu Shen, Andreas Albersmeier, Nienke van der Kolk, Sujin Kim, Jaeho Cha, Christopher Bräsen, Jörn Kalinowski, Bettina Siebers, Sonja-Verena Albers. Sulfolobus acidocaldarius Transports Pentoses via a Carbohydrate Uptake Transporter 2 (CUT2)-Type ABC Transporter and Metabolizes Them through the Aldolase-Independent Weimberg Pathway.
Applied and environmental microbiology.
2018 02; 84(3):. doi:
10.1128/aem.01273-17
. [PMID: 29150511] - Juliana Bernera Ramalho, Aryele Pinto Izaguirry, Melina Bucco Soares, Cristiano Chiapinotto Spiazzi, Natasha Frasson Pavin, Ricardo Ferreira Affeldt, Diogo Seibert Lüdtke, Simone Pinton, Francielli Weber Santos, Marina Prigol. Selenofuranoside improves long-term memory deficits in rats after exposure to monosodium glutamate: Involvement of Na+, K+-ATPase activity.
Physiology & behavior.
2018 02; 184(?):27-33. doi:
10.1016/j.physbeh.2017.10.028
. [PMID: 29097195] - Regina Feil, John Edward Lunn. Quantification of Soluble Sugars and Sugar Alcohols by LC-MS/MS.
Methods in molecular biology (Clifton, N.J.).
2018; 1778(?):87-100. doi:
10.1007/978-1-4939-7819-9_7
. [PMID: 29761433] - James Amor Smith, Maor Bar-Peled. Identification of an apiosyltransferase in the plant pathogen Xanthomonas pisi.
PloS one.
2018; 13(10):e0206187. doi:
10.1371/journal.pone.0206187
. [PMID: 30335828] - Brady D Lee, William A Apel, Linda C DeVeaux, Peter P Sheridan. Concurrent metabolism of pentose and hexose sugars by the polyextremophile Alicyclobacillus acidocaldarius.
Journal of industrial microbiology & biotechnology.
2017 Oct; 44(10):1443-1458. doi:
10.1007/s10295-017-1968-2
. [PMID: 28776272] - Jingbo Yu, Ling Kong, Aihua Zhang, Ying Han, Zhidong Liu, Hui Sun, Liang Liu, Xijun Wang. High-Throughput Metabolomics for Discovering Potential Metabolite Biomarkers and Metabolic Mechanism from the APPswe/PS1dE9 Transgenic Model of Alzheimer's Disease.
Journal of proteome research.
2017 09; 16(9):3219-3228. doi:
10.1021/acs.jproteome.7b00206
. [PMID: 28753016] - Laura H Gunn, Karin Valegård, Inger Andersson. A unique structural domain in Methanococcoides burtonii ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) acts as a small subunit mimic.
The Journal of biological chemistry.
2017 04; 292(16):6838-6850. doi:
10.1074/jbc.m116.767145
. [PMID: 28154188] - Clara Granzotto, Julie Arslanoglu, Christian Rolando, Caroline Tokarski. Plant gum identification in historic artworks.
Scientific reports.
2017 04; 7(?):44538. doi:
10.1038/srep44538
. [PMID: 28425501] - Tobin J Verbeke, Richard J Giannone, Dawn M Klingeman, Nancy L Engle, Thomas Rydzak, Adam M Guss, Timothy J Tschaplinski, Steven D Brown, Robert L Hettich, James G Elkins. Pentose sugars inhibit metabolism and increase expression of an AgrD-type cyclic pentapeptide in Clostridium thermocellum.
Scientific reports.
2017 02; 7(?):43355. doi:
10.1038/srep43355
. [PMID: 28230109] - Girish Kumar Rasineni, Pek Chin Loh, Boon Hoe Lim. Characterization of Chlamydomonas Ribulose-1,5-bisphosphate carboxylase/oxygenase variants mutated at residues that are post-translationally modified.
Biochimica et biophysica acta. General subjects.
2017 Feb; 1861(2):79-85. doi:
10.1016/j.bbagen.2016.10.027
. [PMID: 27816753] - Patricia J Slininger, Maureen A Shea-Andersh, Stephanie R Thompson, Bruce S Dien, Cletus P Kurtzman, Leonardo Da Costa Sousa, Venkatesh Balan. Techniques for the Evolution of Robust Pentose-fermenting Yeast for Bioconversion of Lignocellulose to Ethanol.
Journal of visualized experiments : JoVE.
2016 10; ?(116):. doi:
10.3791/54227
. [PMID: 27805580] - Martina Pičmanová, Birger Lindberg Møller. Apiose: one of nature's witty games.
Glycobiology.
2016 May; 26(5):430-42. doi:
10.1093/glycob/cww012
. [PMID: 26848180] - Kulika Chomvong, Stefan Bauer, Daniel I Benjamin, Xin Li, Daniel K Nomura, Jamie H D Cate. Bypassing the Pentose Phosphate Pathway: Towards Modular Utilization of Xylose.
PloS one.
2016; 11(6):e0158111. doi:
10.1371/journal.pone.0158111
. [PMID: 27336308] - Yuan Xie, Mei Li, Wenrui Chang. Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana.
PloS one.
2016; 11(5):e0156067. doi:
10.1371/journal.pone.0156067
. [PMID: 27223615] - Xukai Li, Haofeng Liao, Chunfen Fan, Huizhen Hu, Ying Li, Jing Li, Zili Yi, Xiwen Cai, Liangcai Peng, Yuanyuan Tu. Distinct Geographical Distribution of the Miscanthus Accessions with Varied Biomass Enzymatic Saccharification.
PloS one.
2016; 11(8):e0160026. doi:
10.1371/journal.pone.0160026
. [PMID: 27532636] - Alejandra Vargas-Tah, Cessna L Moss-Acosta, Berenice Trujillo-Martinez, Axel Tiessen, Edmundo Lozoya-Gloria, Montserrat Orencio-Trejo, Guillermo Gosset, Alfredo Martinez. Non-severe thermochemical hydrolysis of stover from white corn and sequential enzymatic saccharification and fermentation to ethanol.
Bioresource technology.
2015 Dec; 198(?):611-8. doi:
10.1016/j.biortech.2015.09.036
. [PMID: 26433785] - Sun-Li Chong, Sanna Koutaniemi, Minna Juvonen, Marta Derba-Maceluch, Ewa J Mellerowicz, Maija Tenkanen. Glucuronic acid in Arabidopsis thaliana xylans carries a novel pentose substituent.
International journal of biological macromolecules.
2015 Aug; 79(?):807-12. doi:
10.1016/j.ijbiomac.2015.05.056
. [PMID: 26047894] - Ludmilla Aristilde, Ian A Lewis, Junyoung O Park, Joshua D Rabinowitz. Hierarchy in pentose sugar metabolism in Clostridium acetobutylicum.
Applied and environmental microbiology.
2015 Feb; 81(4):1452-62. doi:
10.1128/aem.03199-14
. [PMID: 25527534] - Annabell Linck, Xuan-Khang Vu, Christine Essl, Charlotte Hiesl, Eckhard Boles, Mislav Oreb. On the role of GAPDH isoenzymes during pentose fermentation in engineered Saccharomyces cerevisiae.
FEMS yeast research.
2014 May; 14(3):389-98. doi:
10.1111/1567-1364.12137
. [PMID: 24456572] - Evy Battaglia, Sylvia Klaubauf, Julie Vallet, Cecile Ribot, Marc-Henri Lebrun, Ronald P de Vries. Xlr1 is involved in the transcriptional control of the pentose catabolic pathway, but not hemi-cellulolytic enzymes in Magnaporthe oryzae.
Fungal genetics and biology : FG & B.
2013 Aug; 57(?):76-84. doi:
10.1016/j.fgb.2013.06.005
. [PMID: 23810898] - Adriano Pinto Mariano, Marina O S Dias, Tassia L Junqueira, Marcelo P Cunha, Antonio Bonomi, Rubens Maciel Filho. Utilization of pentoses from sugarcane biomass: techno-economics of biogas vs. butanol production.
Bioresource technology.
2013 Aug; 142(?):390-9. doi:
10.1016/j.biortech.2013.05.052
. [PMID: 23748087] - Lynn Ullmann-Zeunert, Mariana A Stanton, Nathalie Wielsch, Stefan Bartram, Christian Hummert, Aleš Svatoš, Ian T Baldwin, Karin Groten. Quantification of growth-defense trade-offs in a common currency: nitrogen required for phenolamide biosynthesis is not derived from ribulose-1,5-bisphosphate carboxylase/oxygenase turnover.
The Plant journal : for cell and molecular biology.
2013 Aug; 75(3):417-429. doi:
10.1111/tpj.12210
. [PMID: 23590461] - Imre Boldizsár, Zsófia Füzfai, Ibolya Molnár-Perl. Characterization of the endogenous enzymatic hydrolyses of Petroselinum crispum glycosides: determined by chromatography upon their sugar and flavonoid products.
Journal of chromatography. A.
2013 Jun; 1293(?):100-6. doi:
10.1016/j.chroma.2013.03.037
. [PMID: 23623367] - F Wang, Y Zhao, Y Niu, C Wang, M Wang, Y Li, C Sun. Activated glucose-6-phosphate dehydrogenase is associated with insulin resistance by upregulating pentose and pentosidine in diet-induced obesity of rats.
Hormone and metabolic research = Hormon- und Stoffwechselforschung = Hormones et metabolisme.
2012 Dec; 44(13):938-42. doi:
10.1055/s-0032-1323727
. [PMID: 23015612] - Ke-Ying Qian, Steve W Cui, John Nikiforuk, H Douglas Goff. Structural elucidation of rhamnogalacturonans from flaxseed hulls.
Carbohydrate research.
2012 Nov; 362(?):47-55. doi:
10.1016/j.carres.2012.08.005
. [PMID: 23079239] - Xufeng Xiao, Jianjun Lei, Bihao Cao, Guoju Chen, Changming Chen. cDNA-AFLP analysis on bolting or flowering of flowering Chinese cabbage and molecular characteristics of BrcuDFR-like/BrcuAXS gene.
Molecular biology reports.
2012 Jul; 39(7):7525-31. doi:
10.1007/s11033-012-1586-z
. [PMID: 22331487] - Ioannis Dogaris, Olga Gkounta, Diomi Mamma, Dimitris Kekos. Bioconversion of dilute-acid pretreated sorghum bagasse to ethanol by Neurospora crassa.
Applied microbiology and biotechnology.
2012 Jul; 95(2):541-50. doi:
10.1007/s00253-012-4113-1
. [PMID: 22573272] - Camilla L Nesbø, Danielle M Bradnan, Abigail Adebusuyi, Marlena Dlutek, Amanda K Petrus, Julia Foght, W Ford Doolittle, Kenneth M Noll. Mesotoga prima gen. nov., sp. nov., the first described mesophilic species of the Thermotogales.
Extremophiles : life under extreme conditions.
2012 May; 16(3):387-93. doi:
10.1007/s00792-012-0437-0
. [PMID: 22411358] - Xuan Li, Tae Hyun Kim. Bioconversion of corn stover derived pentose and hexose to ethanol using cascade simultaneous saccharification and fermentation (CSSF).
Bioprocess and biosystems engineering.
2012 Jan; 35(1-2):99-104. doi:
10.1007/s00449-011-0617-9
. [PMID: 21909666] - Vipin Gopinath, Tobias M Meiswinkel, Volker F Wendisch, K Madhavan Nampoothiri. Amino acid production from rice straw and wheat bran hydrolysates by recombinant pentose-utilizing Corynebacterium glutamicum.
Applied microbiology and biotechnology.
2011 Dec; 92(5):985-96. doi:
10.1007/s00253-011-3478-x
. [PMID: 21796382] - Sergey A Nepogodiev, Margherita Fais, David L Hughes, Robert A Field. Synthesis of apiose-containing oligosaccharide fragments of the plant cell wall: fragments of rhamnogalacturonan-II side chains A and B, and apiogalacturonan.
Organic & biomolecular chemistry.
2011 Oct; 9(19):6670-84. doi:
10.1039/c1ob05587a
. [PMID: 21847487] - Tae Su Jeong, Kyeong Keun Oh. Optimization of fermentable sugar production from rape straw through hydrothermal acid pretreatment.
Bioresource technology.
2011 Oct; 102(19):9261-6. doi:
10.1016/j.biortech.2011.06.092
. [PMID: 21788133] - Carine Chevrier, Didier Le Nouën, Albert Defoin, Céline Tarnus. Synthesis of 4-amino-4,5-dideoxy-L-lyxofuranose derivatives and their evaluation as fucosidase inhibitors.
Carbohydrate research.
2011 Jul; 346(10):1202-11. doi:
10.1016/j.carres.2011.03.030
. [PMID: 21550024] - Evy Battaglia, Sara Fasmer Hansen, Anne Leendertse, Susan Madrid, Harm Mulder, Igor Nikolaev, Ronald P de Vries. Regulation of pentose utilisation by AraR, but not XlnR, differs in Aspergillus nidulans and Aspergillus niger.
Applied microbiology and biotechnology.
2011 Jul; 91(2):387-97. doi:
10.1007/s00253-011-3242-2
. [PMID: 21484208] - Badal C Saha, Michael A Cotta. Continuous ethanol production from wheat straw hydrolysate by recombinant ethanologenic Escherichia coli strain FBR5.
Applied microbiology and biotechnology.
2011 Apr; 90(2):477-87. doi:
10.1007/s00253-010-3082-5
. [PMID: 21234754] - Sara Fernandes, Patrick Murray. Metabolic engineering for improved microbial pentose fermentation.
Bioengineered bugs.
2010 Nov; 1(6):424-8. doi:
10.4161/bbug.1.6.12724
. [PMID: 21468211] - Øyvind M Andersen, Monica Jordheim, Robert Byamukama, Angella Mbabazi, George Ogweng, Irene Skaar, Bernard Kiremire. Anthocyanins with unusual furanose sugar (apiose) from leaves of Synadenium grantii (Euphorbiaceae).
Phytochemistry.
2010 Sep; 71(13):1558-63. doi:
10.1016/j.phytochem.2010.05.025
. [PMID: 20594565] - Astrid Heide Sziderics, Mouhssin Oufir, Friederike Trognitz, Dieter Kopecky, Ildikó Matusíková, Jean-Francois Hausman, Eva Wilhelm. Organ-specific defence strategies of pepper (Capsicum annuum L.) during early phase of water deficit.
Plant cell reports.
2010 Mar; 29(3):295-305. doi:
10.1007/s00299-010-0822-z
. [PMID: 20087595] - Zhibing Duan, Yianfang Shang, Qiang Gao, Peng Zheng, Chengshu Wang. A phosphoketolase Mpk1 of bacterial origin is adaptively required for full virulence in the insect-pathogenic fungus Metarhizium anisopliae.
Environmental microbiology.
2009 Sep; 11(9):2351-60. doi:
10.1111/j.1462-2920.2009.01961.x
. [PMID: 19538505] - Catarina S Pereira, J Randall McAuley, Michiko E Taga, Karina B Xavier, Stephen T Miller. Sinorhizobium meliloti, a bacterium lacking the autoinducer-2 (AI-2) synthase, responds to AI-2 supplied by other bacteria.
Molecular microbiology.
2008 Dec; 70(5):1223-35. doi:
10.1111/j.1365-2958.2008.06477.x
. [PMID: 18990189] - Stephen J Clayton, Derek B Read, Philip J Murray, Peter J Gregory. Exudation of alcohol and aldehyde sugars from roots of defoliated Lolium perenne L. grown under sterile conditions.
Journal of chemical ecology.
2008 Nov; 34(11):1411-21. doi:
10.1007/s10886-008-9536-x
. [PMID: 18815840] - Charles R Scriver. Garrod's Croonian Lectures (1908) and the charter 'Inborn Errors of Metabolism': albinism, alkaptonuria, cystinuria, and pentosuria at age 100 in 2008.
Journal of inherited metabolic disease.
2008 Oct; 31(5):580-98. doi:
10.1007/s10545-008-0984-9
. [PMID: 18850300] - Yves S-Y Hsieh, Cheng Chien, Sylvian K-S Liao, Shih-Fen Liao, Wei-Ting Hung, Wen-Bin Yang, Chih-Chien Lin, Ting-Jen Rachel Cheng, Chia-Chuan Chang, Jim-Min Fang, Chi-Huey Wong. Structure and bioactivity of the polysaccharides in medicinal plant Dendrobium huoshanense.
Bioorganic & medicinal chemistry.
2008 Jun; 16(11):6054-68. doi:
10.1016/j.bmc.2008.04.042
. [PMID: 18467102] - Joy Doran Peterson, Lonnie O Ingram. Anaerobic respiration in engineered Escherichia coli with an internal electron acceptor to produce fuel ethanol.
Annals of the New York Academy of Sciences.
2008 Mar; 1125(?):363-72. doi:
10.1196/annals.1419.020
. [PMID: 18378606] - E A Giunter, O V Popeĭko, Iu S Ovodov. [Production of polysaccharides by callus cultures of common duckweed].
Prikladnaia biokhimiia i mikrobiologiia.
2008 Jan; 44(1):117-22. doi:
"
. [PMID: 18491608] - Gianni Panagiotou, Reyes Olavarria, Lisbeth Olsson. Penicillium brasilianum as an enzyme factory; the essential role of feruloyl esterases for the hydrolysis of the plant cell wall.
Journal of biotechnology.
2007 Jun; 130(3):219-28. doi:
10.1016/j.jbiotec.2007.04.011
. [PMID: 17544537] - Li-Rong Sun, Chen Qing, Yan-Li Zhang, Shu-Yu Jia, Zhong-Rong Li, Shen-Ji Pei, Ming-Hua Qiu, Michael L Gross, Samuel X Qiu. Cimicifoetisides A and B, two cytotoxic cycloartane triterpenoid glycosides from the rhizomes of Cimicifuga foetida, inhibit proliferation of cancer cells.
Beilstein journal of organic chemistry.
2007 Jan; 3(?):3. doi:
10.1186/1860-5397-3-3
. [PMID: 17266751] - Siddanakoppalu N Pramod, Yeldur P Venkatesh. Utility of pentose colorimetric assay for the purification of potato lectin, an arabinose-rich glycoprotein.
Glycoconjugate journal.
2006 Nov; 23(7-8):481-8. doi:
10.1007/s10719-006-6217-2
. [PMID: 17006640] - R Scott Obach, Anne E Reed-Hagen, Suzanne S Krueger, Beth J Obach, Thomas N O'Connell, Kathleen S Zandi, Sandra Miller, Jotham W Coe. Metabolism and disposition of varenicline, a selective alpha4beta2 acetylcholine receptor partial agonist, in vivo and in vitro.
Drug metabolism and disposition: the biological fate of chemicals.
2006 Jan; 34(1):121-30. doi:
10.1124/dmd.105.006767
. [PMID: 16221753] - A K M Zakir Hossain, Hiroyuki Koyama, Tetsuo Hara. Growth and cell wall properties of two wheat cultivars differing in their sensitivity to aluminum stress.
Journal of plant physiology.
2006 Jan; 163(1):39-47. doi:
10.1016/j.jplph.2005.02.008
. [PMID: 16360802] - Kankipati Hara Kishore, Sanjit Kanjilal, Sunil Misra, Chinnathimma Rajagopal Reddy, Upadyayula Suryanarayana Murty. Comparative chemical characterization of pigmented and less pigmented cell walls of Alternaria tenuissima.
Current microbiology.
2005 Dec; 51(6):399-401. doi:
10.1007/s00284-005-0098-7
. [PMID: 16252128] - Nathalie Boddaert, Maria Ribeiro, Guy Touati, Karine Mention, Vassili Valayanopoulos, Claire Nihoul-Fékété, Francis Brunelle, Pascale de Lonlay. [Radiological innovations in the screening and diagnosis of the inborn errors of metabolism].
Medecine sciences : M/S.
2005 Nov; 21(11):981-6. doi:
10.1051/medsci/20052111981
. [PMID: 16274650] - Anna Kärkönen, Alain Murigneux, Jean-Pierre Martinant, Elodie Pepey, Christophe Tatout, Bernard J Dudley, Stephen C Fry. UDP-glucose dehydrogenases of maize: a role in cell wall pentose biosynthesis.
The Biochemical journal.
2005 Oct; 391(Pt 2):409-15. doi:
10.1042/bj20050800
. [PMID: 15969652] - Tobias Link, Gertrud Lohaus, Ingrid Heiser, Kurt Mendgen, Matthias Hahn, Ralf T Voegele. Characterization of a novel NADP(+)-dependent D-arabitol dehydrogenase from the plant pathogen Uromyces fabae.
The Biochemical journal.
2005 Jul; 389(Pt 2):289-95. doi:
10.1042/bj20050301
. [PMID: 15796718] - Juliette Fortpied, Rita Gemayel, Vincent Stroobant, Emile van Schaftingen. Plant ribulosamine/erythrulosamine 3-kinase, a putative protein-repair enzyme.
The Biochemical journal.
2005 Jun; 388(Pt 3):795-802. doi:
10.1042/bj20041976
. [PMID: 15705060] - Nora B Cronin, Andrias O'Reilly, Hervé Duclohier, B A Wallace. Effects of deglycosylation of sodium channels on their structure and function.
Biochemistry.
2005 Jan; 44(2):441-9. doi:
10.1021/bi048741q
. [PMID: 15641768] - S Pascal-Lorber, E Rathahao, J-P Cravedi, F Laurent. Metabolic fate of [14C]-2,4-dichlorophenol in macrophytes.
Chemosphere.
2004 Jul; 56(3):275-84. doi:
10.1016/j.chemosphere.2004.02.017
. [PMID: 15172600] - Bruce S Dien, Nick Nagle, Kevin B Hicks, Vijay Singh, Robert A Moreau, Melvin P Tucker, Nancy N Nichols, David B Johnston, Michael A Cotta, Quang Nguyen, Rodney J Bothast. Fermentation of 'Quick Fiber' produced from a modified corn-milling process into ethanol and recovery of corn fiber.
Applied biochemistry and biotechnology.
2004; 113-116(?):937-49. doi:
10.1385/abab:115:1-3:0937
. [PMID: 15054243] - Harsha Joshi, Virendra P Kapoor. Cassia grandis Linn. f. seed galactomannan: structural and crystallographical studies.
Carbohydrate research.
2003 Sep; 338(18):1907-12. doi:
10.1016/s0008-6215(03)00258-1
. [PMID: 12932375] - Michael Mølhøj, Rajeev Verma, Wolf-Dieter Reiter. The biosynthesis of the branched-chain sugar d-apiose in plants: functional cloning and characterization of a UDP-d-apiose/UDP-d-xylose synthase from Arabidopsis.
The Plant journal : for cell and molecular biology.
2003 Sep; 35(6):693-703. doi:
10.1046/j.1365-313x.2003.01841.x
. [PMID: 12969423] - Katarína Slabá, Ahmed Hussein, Peter Palkovic, Viktor Horváth, Rudolf Toman. Studies on the immunological role of virenose and dihydrohydroxystreptose present in the Coxiella burnetii phase I lipopolysaccharide.
Annals of the New York Academy of Sciences.
2003 Jun; 990(?):505-9. doi:
10.1111/j.1749-6632.2003.tb07419.x
. [PMID: 12860682] - Hilary Major, Jose Castro-Perez, Jeremy K Nicholson, Ian D Wilson. Characterisation of putative pentose-containing conjugates as minor metabolites of 4-bromoaniline present in the urine of rats following intraperitoneal administration.
Rapid communications in mass spectrometry : RCM.
2003; 17(1):76-80. doi:
10.1002/rcm.874
. [PMID: 12478557] - Filip Cuyckens, Abdelaaty A Shahat, Luc Pieters, Magda Claeys. Direct stereochemical assignment of hexose and pentose residues in flavonoid O-glycosides by fast atom bombardment and electrospray ionization mass spectrometry.
Journal of mass spectrometry : JMS.
2002 Dec; 37(12):1272-9. doi:
10.1002/jms.402
. [PMID: 12489088] - Maria M Mangos, Masad J Damha. Flexible and frozen sugar-modified nucleic acids--modulation of biological activity through furanose ring dynamics in the antisense strand.
Current topics in medicinal chemistry.
2002 Oct; 2(10):1147-71. doi:
10.2174/1568026023393110
. [PMID: 12173972] - S C Clifford, S K Arndt, M Popp, H G Jones. Mucilages and polysaccharides in Ziziphus species (Rhamnaceae): localization, composition and physiological roles during drought-stress.
Journal of experimental botany.
2002 Jan; 53(366):131-8. doi:
"
. [PMID: 11741049] - K M Biemel, O Reihl, J Conrad, M O Lederer. Formation pathways for lysine-arginine cross-links derived from hexoses and pentoses by Maillard processes: unraveling the structure of a pentosidine precursor.
The Journal of biological chemistry.
2001 Jun; 276(26):23405-12. doi:
10.1074/jbc.m102035200
. [PMID: 11279247] - B Raïs, B Comin, J Puigjaner, J L Brandes, E Creppy, D Saboureau, R Ennamany, W N Lee, L G Boros, M Cascante. Oxythiamine and dehydroepiandrosterone induce a G1 phase cycle arrest in Ehrlich's tumor cells through inhibition of the pentose cycle.
FEBS letters.
1999 Jul; 456(1):113-8. doi:
10.1016/s0014-5793(99)00924-2
. [PMID: 10452541] - E Truernit, R Stadler, K Baier, N Sauer. A male gametophyte-specific monosaccharide transporter in Arabidopsis.
The Plant journal : for cell and molecular biology.
1999 Jan; 17(2):191-201. doi:
10.1046/j.1365-313x.1999.00372.x
. [PMID: 10074716]