(3R)-3-Hydroxy-3-methyl-5-(phosphonooxy)pentanoic acid (BioDeep_00001869060)

Main id: BioDeep_00000004574

 


代谢物信息卡片


(3R)-3-Hydroxy-3-methyl-5-(phosphonooxy)pentanoic acid

化学式: C6H13O7P (228.0399)
中文名称:
谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: CC(CCOP(=O)(O)O)(CC(=O)O)O
InChI: InChI=1S/C6H13O7P/c1-6(9,4-5(7)8)2-3-13-14(10,11)12/h9H,2-4H2,1H3,(H,7,8)(H2,10,11,12)/t6-/m1/s1

描述信息

同义名列表

1 个代谢物同义名

(3R)-3-Hydroxy-3-methyl-5-(phosphonooxy)pentanoic acid



数据库引用编号

9 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

2 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 12 APOE, CBLB, DNAJA1, DNAJB1, MMUT, MVD, MVK, PKM, PRKX, SCP2, SREBF2, TP53
Endoplasmic reticulum membrane 4 DPM1, HMGCR, HSP90B1, SREBF2
Nucleus 10 APOE, DNAJA1, DNAJB1, DPM1, HSP90B1, PKM, PRKX, SCP2, SREBF2, TP53
cytosol 11 CBLB, DNAJA1, DNAJB1, HSP90B1, MVD, MVK, PKM, PMVK, SCP2, SREBF2, TP53
dendrite 1 APOE
centrosome 1 TP53
nucleoplasm 6 CBLB, DNAJB1, PRKX, SCP2, SREBF2, TP53
Lipid-anchor 1 DNAJA1
Multi-pass membrane protein 2 HMGCR, SREBF2
Golgi apparatus membrane 1 SREBF2
glutamatergic synapse 3 APOE, CBLB, DNAJB1
Golgi apparatus 1 APOE
Golgi membrane 1 SREBF2
neuronal cell body 2 APOE, DNAJB1
postsynapse 1 CBLB
smooth endoplasmic reticulum 1 HSP90B1
Cytoplasm, cytosol 1 PMVK
plasma membrane 2 APOE, CBLB
Membrane 8 APOE, DNAJA1, DPM1, HMGCR, HSP90B1, PMVK, SCP2, TP53
extracellular exosome 6 APOE, DNAJA1, DNAJB1, HSP90B1, PKM, PMVK
endoplasmic reticulum 7 APOE, DPM1, HMGCR, HSP90B1, SCP2, SREBF2, TP53
extracellular space 1 APOE
perinuclear region of cytoplasm 2 DNAJA1, HSP90B1
mitochondrion 6 DNAJA1, MMAB, MMUT, PKM, SCP2, TP53
protein-containing complex 3 HSP90B1, SCP2, TP53
intracellular membrane-bounded organelle 2 MVK, SREBF2
postsynaptic density 1 DNAJB1
Secreted 1 APOE
extracellular region 3 APOE, HSP90B1, PKM
Mitochondrion matrix 2 MMUT, TP53
mitochondrial matrix 3 MMAB, MMUT, TP53
transcription regulator complex 1 TP53
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome 1 TP53
Endosome, multivesicular body 1 APOE
Extracellular vesicle 2 APOE, PKM
Secreted, extracellular space, extracellular matrix 1 APOE
chylomicron 1 APOE
high-density lipoprotein particle 1 APOE
low-density lipoprotein particle 1 APOE
multivesicular body 1 APOE
very-low-density lipoprotein particle 1 APOE
dendritic spine 1 DNAJB1
microtubule cytoskeleton 1 DNAJA1
nucleolus 2 DNAJB1, TP53
midbody 1 HSP90B1
Early endosome 1 APOE
vesicle 1 PKM
Cytoplasm, perinuclear region 1 DNAJA1
Membrane raft 1 CBLB
Cytoplasm, cytoskeleton 1 TP53
focal adhesion 1 HSP90B1
extracellular matrix 1 APOE
Peroxisome 3 MVK, PMVK, SCP2
peroxisomal matrix 1 SCP2
peroxisomal membrane 1 HMGCR
Nucleus, PML body 1 TP53
PML body 1 TP53
collagen-containing extracellular matrix 3 APOE, HSP90B1, PKM
cilium 1 PKM
chromatin 2 SREBF2, TP53
Chromosome 1 SCP2
Secreted, extracellular space 1 APOE
Nucleus, nucleolus 1 DNAJB1
condensed chromosome, centromeric region 1 SCP2
blood microparticle 1 APOE
site of double-strand break 1 TP53
lateral element 1 SCP2
Melanosome 2 APOE, HSP90B1
germ cell nucleus 1 TP53
replication fork 1 TP53
sperm plasma membrane 1 HSP90B1
Peroxisome membrane 1 HMGCR
Microsome 1 DNAJA1
ficolin-1-rich granule lumen 1 PKM
secretory granule lumen 1 PKM
endoplasmic reticulum lumen 2 APOE, HSP90B1
nuclear matrix 1 TP53
transcription repressor complex 1 TP53
ER to Golgi transport vesicle membrane 1 SREBF2
clathrin-coated endocytic vesicle membrane 1 APOE
Sarcoplasmic reticulum lumen 1 HSP90B1
[Isoform 1]: Nucleus 1 TP53
synaptic cleft 1 APOE
synaptonemal complex 1 SCP2
SREBP-SCAP-Insig complex 1 SREBF2
Rough endoplasmic reticulum 1 PKM
dolichol-phosphate-mannose synthase complex 1 DPM1
Cytoplasmic vesicle, COPII-coated vesicle membrane 1 SREBF2
discoidal high-density lipoprotein particle 1 APOE
endocytic vesicle lumen 2 APOE, HSP90B1
chylomicron remnant 1 APOE
intermediate-density lipoprotein particle 1 APOE
lipoprotein particle 1 APOE
multivesicular body, internal vesicle 1 APOE
sperm head 1 DNAJB1
endoplasmic reticulum chaperone complex 1 HSP90B1
[Isoform M2]: Cytoplasm 1 PKM
[Isoform M1]: Cytoplasm 1 PKM
cytoplasmic side of endoplasmic reticulum membrane 1 DNAJA1
[Isoform SCP2]: Peroxisome 1 SCP2
[Isoform SCPx]: Peroxisome 1 SCP2
[Sterol regulatory element-binding protein 2]: Endoplasmic reticulum membrane 1 SREBF2
[Processed sterol regulatory element-binding protein 2]: Nucleus 1 SREBF2


文献列表

  • Daniel P Duarte, Éden R Ferreira, Fabio M Lima, Franciane Batista, Michel De Groote, Eduardo Horjales, Luiz C Miletti, Diana Bahia. Molecular Characterization of Trypanosoma evansi Mevalonate Kinase (TeMVK). Frontiers in cellular and infection microbiology. 2018; 8(?):223. doi: 10.3389/fcimb.2018.00223. [PMID: 30042928]
  • C Feyerabend, M A Russell. Improved gas chromatographic method and micro-extraction technique for the measurement of nicotine in biological fluids. The Journal of pharmacy and pharmacology. 1979 Feb; 31(2):73-6. doi: 10.1111/j.2042-7158.1979.tb13435.x. [PMID: 33255]
  • J S Charnock, A F Almeida, R To. Temperature-activity relationships of cation activation and ouabain inhibition of (Na+ + K+)-ATPase. Archives of biochemistry and biophysics. 1975 Apr; 167(2):480-7. doi: 10.1016/0003-9861(75)90490-7. [PMID: 123731]
  • M TADA, F LYNEN. [On the biosynthesis of terpenes. XIV. On the determination of phosphomevalonic acid kinase and pyrophosphomevalonic acid decarboxylase in cell extracts]. Journal of biochemistry. 1961 Jun; 49(?):758-64. doi: 10.1093/oxfordjournals.jbchem.a127368. [PMID: 13774769]
  • . . . . doi: . [PMID: 16519518]