benzocatechol (BioDeep_00001868576)

Main id: BioDeep_00000004194

 

natural product


代谢物信息卡片


Naphthalene-1,2-diol

  化学式: C10H8O2 (160.0524)
中文名称: 1,2-二羟基萘
  谱图信息: 最多检出来源 () 0%

分子结构信息

SMILES: C1=CC=C2C(=C1)C=CC(=C2O)O
InChI: InChI=1S/C10H8O2/c11-9-6-5-7-3-1-2-4-8(7)10(9)12/h1-6,11-12H

描述信息

同义名列表

3 个代谢物同义名

Naphthalene-1,2-diol; benzocatechol; Naphthalene-1,2-diol



数据库引用编号

13 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(1)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

8 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 11 AKR1B1, BCL2, CASP7, CAT, CLEC7A, EIF2AK2, HPD, NUFIP2, PIK3CA, SH2D1A, TYR
Peripheral membrane protein 2 HPD, HSD17B6
Endoplasmic reticulum membrane 2 BCL2, HPD
Nucleus 6 BCL2, CASP7, EIF2AK2, NUFIP2, PDXK, PES1
cytosol 12 AKR1B1, BCL2, CASP7, CAT, EIF2AK2, HPD, NUFIP2, OXSM, PDXK, PES1, PIK3CA, SH2D1A
nuclear body 1 NUFIP2
nucleoplasm 6 AKR1B1, CASP7, EIF2AK2, NUFIP2, PDXK, PES1
Cell membrane 3 CLEC7A, EPHA2, GPRC5A
lamellipodium 2 EPHA2, PIK3CA
ruffle membrane 1 EPHA2
Early endosome membrane 1 HSD17B6
Multi-pass membrane protein 1 GPRC5A
Golgi apparatus membrane 1 HPD
cell surface 3 CLEC7A, EPHA2, TNR
glutamatergic synapse 1 TNR
Golgi membrane 1 HPD
Cytoplasm, cytosol 2 CASP7, PDXK
Lysosome 1 TYR
plasma membrane 4 CLEC7A, EPHA2, GPRC5A, PIK3CA
Membrane 7 BCL2, CAT, CLEC7A, EIF2AK2, EPHA2, NUFIP2, PES1
axon 1 CCK
extracellular exosome 5 AKR1B1, CAT, GPRC5A, HPD, PDXK
Lumenal side 1 HSD17B6
endoplasmic reticulum 2 BCL2, HSD17B6
extracellular space 4 AKR1B1, CASP7, CCK, TNR
perinuclear region of cytoplasm 3 EIF2AK2, PIK3CA, TYR
Schaffer collateral - CA1 synapse 1 TNR
intercalated disc 1 PIK3CA
mitochondrion 4 AKR1B1, BCL2, CAT, OXSM
protein-containing complex 2 BCL2, CAT
intracellular membrane-bounded organelle 4 CAT, GPRC5A, HSD17B6, TYR
Microsome membrane 1 HSD17B6
Single-pass type I membrane protein 2 EPHA2, TYR
Secreted 1 CCK
extracellular region 4 CAT, CCK, PDXK, TNR
Mitochondrion outer membrane 1 BCL2
Single-pass membrane protein 2 BCL2, EPHA2
mitochondrial outer membrane 1 BCL2
mitochondrial matrix 2 CAT, OXSM
Nucleus membrane 1 BCL2
Bcl-2 family protein complex 1 BCL2
nuclear membrane 1 BCL2
Secreted, extracellular space, extracellular matrix 1 TNR
nucleolus 2 GPRC5A, PES1
Melanosome membrane 1 TYR
Golgi-associated vesicle 1 TYR
Single-pass type II membrane protein 1 CLEC7A
vesicle 1 GPRC5A
Cell projection, ruffle membrane 1 EPHA2
Cytoplasm, perinuclear region 1 EIF2AK2
Membrane raft 1 TNR
pore complex 1 BCL2
Cell junction, focal adhesion 1 EPHA2
focal adhesion 2 CAT, EPHA2
Peroxisome 1 CAT
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
collagen-containing extracellular matrix 1 TNR
receptor complex 2 EPHA2, GPRC5A
Chromosome 1 PES1
[Isoform 5]: Cytoplasm 1 CLEC7A
Secreted, extracellular space 1 CASP7
Nucleus, nucleolus 1 PES1
leading edge membrane 1 EPHA2
Cytoplasmic vesicle membrane 1 GPRC5A
Nucleus, nucleoplasm 1 PES1
Melanosome 1 TYR
Cytoplasm, Stress granule 1 NUFIP2
cytoplasmic stress granule 1 NUFIP2
myelin sheath 1 BCL2
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 2 CAT, PDXK
phosphatidylinositol 3-kinase complex 1 PIK3CA
phosphatidylinositol 3-kinase complex, class IA 1 PIK3CA
specific granule lumen 1 PDXK
tight junction 1 EPHA2
PeBoW complex 1 PES1
preribosome, large subunit precursor 1 PES1
perineuronal net 1 TNR
[Isoform 7]: Cytoplasm 1 CLEC7A
lamellipodium membrane 1 EPHA2
ribosome 2 EIF2AK2, NUFIP2
catalase complex 1 CAT
Cell projection, lamellipodium membrane 1 EPHA2
BAD-BCL-2 complex 1 BCL2
[Isoform 6]: Cytoplasm 1 CLEC7A
tenascin complex 1 TNR
phosphatidylinositol 3-kinase complex, class IB 1 PIK3CA


文献列表

  • Katrin Klotz, Tobias Weiß, Melanie Zobel, Daniel Bury, Dietmar Breuer, Silke Werner, Kirsten Sucker, Wolfgang Zschiesche, Thomas Göen, Thomas Brüning, Hans Drexler. Validity of different biomonitoring parameters in human urine for the assessment of occupational exposure to naphthalene. Archives of toxicology. 2019 08; 93(8):2185-2195. doi: 10.1007/s00204-019-02468-9. [PMID: 31222524]
  • Katrin Klotz, Melanie Zobel, Anja Schäferhenrich, Ralph Hebisch, Hans Drexler, Thomas Göen. Suitability of several naphthalene metabolites for their application in biomonitoring studies. Toxicology letters. 2018 Dec; 298(?):91-98. doi: 10.1016/j.toxlet.2018.07.008. [PMID: 29990563]
  • Melanie Zobel, Thomas Göen, Vladimir Belov, Katrin Klotz. Reliable quantification of 1,2-dihydroxynaphthalene in urine using a conjugated reference compound for calibration. Analytical and bioanalytical chemistry. 2017 Nov; 409(29):6861-6872. doi: 10.1007/s00216-017-0651-9. [PMID: 29018900]
  • Jian Zhang, Xu Zhang, Juan Liu, Rong Li, Biao Shen. Isolation of a thermophilic bacterium, Geobacillus sp. SH-1, capable of degrading aliphatic hydrocarbons and naphthalene simultaneously, and identification of its naphthalene degrading pathway. Bioresource technology. 2012 Nov; 124(?):83-9. doi: 10.1016/j.biortech.2012.08.044. [PMID: 22985850]
  • Mohammad Amin Almasi, Aboubakr Moradi, Jaber Nasiri, Soraya Karami, Mojtaba Nasiri. Assessment of performance ability of three diagnostic methods for detection of Potato Leafroll virus (PLRV) using different visualizing systems. Applied biochemistry and biotechnology. 2012 Oct; 168(4):770-84. doi: 10.1007/s12010-012-9818-1. [PMID: 22907514]
  • Yuji Arimatsu, Sasithorn Kaewkes, Thewarach Laha, Sung-Jong Hong, Banchob Sripa. Rapid detection of Opisthorchis viverrini copro-DNA using loop-mediated isothermal amplification (LAMP). Parasitology international. 2012 Mar; 61(1):178-82. doi: 10.1016/j.parint.2011.08.009. [PMID: 21871581]
  • Darren M Soanes, Apratim Chakrabarti, Konrad H Paszkiewicz, Angus L Dawe, Nicholas J Talbot. Genome-wide transcriptional profiling of appressorium development by the rice blast fungus Magnaporthe oryzae. PLoS pathogens. 2012 Feb; 8(2):e1002514. doi: 10.1371/journal.ppat.1002514. [PMID: 22346750]
  • Lisa I Ward, Scott J Harper. Loop-mediated isothermal amplification for the detection of plant pathogens. Methods in molecular biology (Clifton, N.J.). 2012; 862(?):161-70. doi: 10.1007/978-1-61779-609-8_13. [PMID: 22419496]
  • Kai Nie, Yong Zhang, Le Luo, Meng-Jie Yang, Xiu-Mei Hu, Miao Wang, Shuang-Li Zhu, Feng Han, Wen-Bo Xu, Xue-Jun Ma. Visual detection of human enterovirus 71 subgenotype C4 and Coxsackievirus A16 by reverse transcription loop-mediated isothermal amplification with the hydroxynaphthol blue dye. Journal of virological methods. 2011 Aug; 175(2):283-6. doi: 10.1016/j.jviromet.2011.05.020. [PMID: 21621554]
  • Katrin Klotz, Birgit Karin Schindler, Jürgen Angerer. 1,2-Dihydroxynaphthalene as biomarker for a naphthalene exposure in humans. International journal of hygiene and environmental health. 2011 Mar; 214(2):110-4. doi: 10.1016/j.ijheh.2010.11.003. [PMID: 21147027]
  • Kustiariyah Tarman, Ulrike Lindequist, Kristian Wende, Andrea Porzel, Norbert Arnold, Ludger A Wessjohann. Isolation of a new natural product and cytotoxic and antimicrobial activities of extracts from fungi of Indonesian marine habitats. Marine drugs. 2011 Feb; 9(3):294-306. doi: 10.3390/md9030294. [PMID: 21556160]
  • Valentina Catalano, Mariarosaria Vergara, Jasmin R Hauzenberger, Bernhard Seiboth, Sabrina Sarrocco, Giovanni Vannacci, Christian P Kubicek, Verena Seidl-Seiboth. Use of a non-homologous end-joining-deficient strain (delta-ku70) of the biocontrol fungus Trichoderma virens to investigate the function of the laccase gene lcc1 in sclerotia degradation. Current genetics. 2011 Feb; 57(1):13-23. doi: 10.1007/s00294-010-0322-2. [PMID: 20872221]
  • Tereza C Cardoso, Heitor F Ferrari, Lívia C Bregano, Camila Silva-Frade, Ana Carolina G Rosa, Alexandre L Andrade. Visual detection of turkey coronavirus RNA in tissues and feces by reverse-transcription loop-mediated isothermal amplification (RT-LAMP) with hydroxynaphthol blue dye. Molecular and cellular probes. 2010 Dec; 24(6):415-7. doi: 10.1016/j.mcp.2010.08.003. [PMID: 20732411]
  • S J Harper, L I Ward, G R G Clover. Development of LAMP and real-time PCR methods for the rapid detection of Xylella fastidiosa for quarantine and field applications. Phytopathology. 2010 Dec; 100(12):1282-8. doi: 10.1094/phyto-06-10-0168. [PMID: 20731533]
  • Vijai Bhadauria, Li-Xia Wang, You-Liang Peng. Proteomic changes associated with deletion of the Magnaporthe oryzae conidial morphology-regulating gene COM1. Biology direct. 2010 Nov; 5(?):61. doi: 10.1186/1745-6150-5-61. [PMID: 21040590]
  • Motoki Goto, Kayo Shimada, Ayako Sato, Eri Takahashi, Takafumi Fukasawa, Tomoki Takahashi, Seii Ohka, Takahide Taniguchi, Eiichi Honda, Akio Nomoto, Atsuo Ogura, Teruo Kirikae, Ken-Ichi Hanaki. Rapid detection of Pseudomonas aeruginosa in mouse feces by colorimetric loop-mediated isothermal amplification. Journal of microbiological methods. 2010 Jun; 81(3):247-52. doi: 10.1016/j.mimet.2010.03.008. [PMID: 20298724]
  • Renan Wu, Suramya Waidyanatha, Alistair P Henderson, Berrin Serdar, Yuxin Zheng, Stephen M Rappaport. Determination of dihydroxynaphthalenes in human urine by gas chromatography-mass spectrometry. Journal of chromatography. B, Analytical technologies in the biomedical and life sciences. 2005 Nov; 826(1-2):206-13. doi: 10.1016/j.jchromb.2005.08.022. [PMID: 16169295]
  • Daisuke Miyazawa, Gouri Mukerjee-Dhar, Minoru Shimura, Takashi Hatta, Kazuhide Kimbara. Genes for Mn(II)-dependent NahC and Fe(II)-dependent NahH located in close proximity in the thermophilic naphthalene and PCB degrader, Bacillus sp. JF8: cloning and characterization. Microbiology (Reading, England). 2004 Apr; 150(Pt 4):993-1004. doi: 10.1099/mic.0.26858-0. [PMID: 15073308]
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