5-hydroxylysine (BioDeep_00000173596)

   

human metabolite blood metabolite natural product


代谢物信息卡片


(2S,5R)-2,6-Diamino-5-hydroxyhexanoic acid

化学式: C6H14N2O3 (162.1004)
中文名称: 5-羟基-赖氨酸
谱图信息: 最多检出来源 Homo sapiens(blood) 30.12%

Reviewed

Last reviewed on 2024-09-14.

Cite this Page

5-hydroxylysine. BioDeep Database v3. PANOMIX ltd, a top metabolomics service provider from China. https://query.biodeep.cn/s/5-hydroxylysine (retrieved 2024-12-22) (BioDeep RN: BioDeep_00000173596). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

分子结构信息

SMILES: C(CC(C(=O)O)N)C(CN)O
InChI: InChI=1S/C6H14N2O3/c7-3-4(9)1-2-5(8)6(10)11/h4-5,9H,1-3,7-8H2,(H,10,11)

描述信息

同义名列表

11 个代谢物同义名

(2S,5R)-2,6-Diamino-5-hydroxyhexanoic acid; 5-Hydroxy-2,6-diaminohexanoic acid; 2,6 Diamino 5 hydroxyhexanoic acid; 2,6-Diamino-5-hydroxyhexanoic acid; 5-Hydroxy-2,6-diaminohexanoate; 2,6-Diamino-5-hydroxyhexanoate; Lysine, 5 hydroxy; 5 Hydroxylysine; 5-hydroxylysine; Hydroxylysine; Hyl



数据库引用编号

11 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(4)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

24 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 8 APEH, CD36, CST3, KITLG, MATK, PTPRF, SRC, TNK1
Peripheral membrane protein 2 GBA1, TNK1
Nucleus 1 SRC
cytosol 6 APEH, CNDP1, ENGASE, MATK, PRF1, SRC
phagocytic vesicle 1 CD36
trans-Golgi network 1 GBA1
nucleoplasm 1 SRC
Cell membrane 5 CD36, KITLG, PRF1, SRC, TNF
Lipid-anchor 1 SRC
lamellipodium 1 KITLG
ruffle membrane 1 SRC
Multi-pass membrane protein 2 CD36, PRF1
cell junction 1 SRC
cell surface 3 CD36, PXDN, TNF
glutamatergic synapse 1 SRC
Golgi apparatus 3 CD36, CST3, GBA1
lysosomal membrane 1 GBA1
mitochondrial inner membrane 1 SRC
neuronal cell body 3 PTPRF, SRC, TNF
Cytoplasm, cytosol 1 ENGASE
Lysosome 2 GBA1, SRC
plasma membrane 11 CD36, CSF2, CST3, F2, KITLG, MATK, PRF1, PTPRF, SRC, TNF, TNK1
Membrane 7 CD36, COLGALT1, KITLG, MATK, PRF1, PTPRF, TNK1
apical plasma membrane 1 CD36
caveola 2 CD36, SRC
extracellular exosome 7 APEH, CST3, F2, GBA1, PTPRF, PXDN, SRC
Lysosome membrane 1 GBA1
Lumenal side 1 GBA1
endoplasmic reticulum 3 CST3, GBA1, PXDN
extracellular space 10 CD36, CSF2, CST3, DCN, F2, IL3, IL6, KITLG, PXDN, TNF
lysosomal lumen 2 DCN, GBA1
perinuclear region of cytoplasm 1 SRC
mitochondrion 1 SRC
intracellular membrane-bounded organelle 1 CSF2
filopodium 1 KITLG
Single-pass type I membrane protein 1 KITLG
Secreted 9 CNDP1, CSF2, CST3, DCN, F2, IL3, IL6, KITLG, PRF1
extracellular region 12 APEH, CNDP1, CSF2, CST3, DCN, F2, IL3, IL6, KITLG, PRF1, PXDN, TNF
Single-pass membrane protein 1 PTPRF
nuclear membrane 1 APEH
external side of plasma membrane 2 CD36, TNF
Secreted, extracellular space, extracellular matrix 1 DCN
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
vesicle 1 CST3
Apical cell membrane 1 CD36
Cell projection, lamellipodium 1 KITLG
Cytoplasm, perinuclear region 1 SRC
Mitochondrion inner membrane 1 SRC
Membrane raft 3 CD36, SRC, TNF
Cell junction, focal adhesion 1 SRC
Cytoplasm, cytoskeleton 2 KITLG, SRC
focal adhesion 1 SRC
extracellular matrix 1 PXDN
basement membrane 1 PXDN
collagen trimer 1 CD36
collagen-containing extracellular matrix 3 DCN, F2, PXDN
Cell projection, filopodium 1 KITLG
Late endosome 1 SRC
receptor complex 1 CD36
neuron projection 1 PTPRF
phagocytic cup 1 TNF
cell periphery 1 CD36
cytoskeleton 1 KITLG
podosome 1 SRC
brush border membrane 1 CD36
actin filament 1 SRC
blood microparticle 1 F2
endosome lumen 1 PRF1
specific granule membrane 1 CD36
dendritic growth cone 1 SRC
synaptic membrane 1 SRC
ficolin-1-rich granule lumen 2 APEH, CST3
Golgi lumen 2 DCN, F2
endoplasmic reticulum lumen 4 COLGALT1, CST3, F2, IL6
tertiary granule lumen 1 CST3
endocytic vesicle membrane 1 CD36
immunological synapse 1 PRF1
[Isoform 2]: Cytoplasm 1 KITLG
postsynaptic specialization, intracellular component 1 SRC
granulocyte macrophage colony-stimulating factor receptor complex 1 CSF2
platelet alpha granule membrane 1 CD36
Secreted, extracellular space, extracellular matrix, basement membrane 1 PXDN
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
interleukin-6 receptor complex 1 IL6
Cytolytic granule 1 PRF1
cytolytic granule lumen 1 PRF1
dendritic filopodium 1 SRC
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF
[PXDN active fragment]: Secreted, extracellular space, extracellular matrix 1 PXDN


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