2'-Deoxyinosine triphosphate (BioDeep_00000001623)

 

Secondary id: BioDeep_00001869043

natural product human metabolite PANOMIX_OTCML-2023 Endogenous


代谢物信息卡片


{[hydroxy({[hydroxy({[(2R,3S,5R)-3-hydroxy-5-(6-oxo-6,9-dihydro-3H-purin-9-yl)oxolan-2-yl]methoxy})phosphoryl]oxy})phosphoryl]oxy}phosphonic acid

化学式: C10H15N4O13P3 (491.9848)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(otcml) 31.86%

分子结构信息

SMILES: C1C(C(OC1N2C=NC3=C2N=CNC3=O)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O
InChI: InChI=1S/C10H15N4O13P3/c15-5-1-7(14-4-13-8-9(14)11-3-12-10(8)16)25-6(5)2-24-29(20,21)27-30(22,23)26-28(17,18)19/h3-7,15H,1-2H2,(H,20,21)(H,22,23)(H,11,12,16)(H2,17,18,19)/t5-,6+,7+/m0/s1

描述信息

2-Deoxyinosine triphosphate (dITP) is a deoxyribonucleotide that may be generated from dATP by slow, non-enzymatic hydrolysis or by reduction of ITP. Normally, the cellular dITP concentration is very low. The inability to demonstrate the synthesis of dITP in cellular preparations has been attributed to the presence in the cytoplasm of an inosine triphosphatase pyrophosphatase (ITPase, EC 3.6.1.19), an enzyme that does not permit accumulation of these nucleotides. dITP can be incorporated into DNA by polymerases. The deoxyribonucleotide dITP behaves as a dGTP analogue and is incorporated opposite cytosine with about 50\\% efficiency. Both isolated nuclei and purified DNA polymerases rapidly incorporated dITP into DNA. In the presence of ATP, dITP is stabilized in extracts of nuclei. dITP exist in all cells and is potentially mutagenic, and the levels of these nucleotides are controlled by ITPase. The function of this ubiquitous protein family is proposed to be the elimination of minor potentially mutagenic or clastogenic purine nucleoside triphosphates from the cell. (PMID: 11278832) [HMDB]
2-Deoxyinosine triphosphate (dITP) is a deoxyribonucleotide that may be generated from dATP by slow, non-enzymatic hydrolysis or by reduction of ITP. Normally, the cellular dITP concentration is very low. The inability to demonstrate the synthesis of dITP in cellular preparations has been attributed to the presence in the cytoplasm of an inosine triphosphatase pyrophosphatase (ITPase, EC 3.6.1.19), an enzyme that does not permit accumulation of these nucleotides. dITP can be incorporated into DNA by polymerases. The deoxyribonucleotide dITP behaves as a dGTP analogue and is incorporated opposite cytosine with about 50\\% efficiency. Both isolated nuclei and purified DNA polymerases rapidly incorporated dITP into DNA. In the presence of ATP, dITP is stabilized in extracts of nuclei. dITP exist in all cells and is potentially mutagenic, and the levels of these nucleotides are controlled by ITPase. The function of this ubiquitous protein family is proposed to be the elimination of minor potentially mutagenic or clastogenic purine nucleoside triphosphates from the cell. (PMID: 11278832).
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同义名列表

17 个代谢物同义名

{[hydroxy({[hydroxy({[(2R,3S,5R)-3-hydroxy-5-(6-oxo-6,9-dihydro-3H-purin-9-yl)oxolan-2-yl]methoxy})phosphoryl]oxy})phosphoryl]oxy}phosphonic acid; [hydroxy({hydroxy[(2R,3S,5R)-3-hydroxy-5-(6-oxo-3H-purin-9-yl)oxolan-2-yl]methoxyphosphoryl}oxy)phosphoryl]oxyphosphonic acid; 2-Deoxy-inosine 5-(tetrahydrogen triphosphate); 2-DEOXYINOSINE-5-TRIPHOSPHATE TRISODIUM SALT; 2-Deoxyinosine triphosphate, trisodium salt; 2-Deoxyinosine 5-triphosphoric acid; 2-Deoxyinosine-5-triphosphoric acid; Deoxyinosine 5-triphosphoric acid; 2-Deoxyinosine triphosphoric acid; 2-Deoxyinosine-5-triphosphate; 2-Deoxyinosine 5-triphosphate; Deoxyinosine 5-triphosphate; 2-Deoxyinosine triphosphate; Deoxyinosine triphosphate; dITP - lyophilized; 2-Ditp; DITP



数据库引用编号

21 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

15 个相关的代谢反应过程信息。

Reactome(12)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(2)

PlantCyc(0)

COVID-19 Disease Map(1)

PathBank(0)

PharmGKB(0)

3 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 10 DCK, DTYMK, EMP2, ENDOV, GTPBP4, ITPA, NUDT16, PGLS, PURA, SP1
Nucleus 15 DCK, DTYMK, DUT, EMP2, GTPBP4, MLH1, MSH2, NUDT16, PMS2, POLH, PURA, RFC1, SP1, SP3, UNG
cytosol 8 DCK, DTYMK, GTPBP4, ITPA, PGLS, PMS2, POLH, SP3
dendrite 1 PURA
nucleoplasm 13 DCK, DUT, GTPBP4, ITPA, MLH1, MSH2, NUDT16, PMS2, POLH, RFC1, SP1, SP3, UNG
Cell membrane 3 EMP2, RFC1, SLC19A1
Multi-pass membrane protein 3 EMP2, RFC1, SLC19A1
Golgi apparatus membrane 1 EMP2
cell surface 1 EMP2
glutamatergic synapse 1 PURA
Golgi apparatus 2 EMP2, POLH
Golgi membrane 1 EMP2
neuronal cell body 1 PURA
postsynapse 1 PURA
plasma membrane 3 EMP2, RFC1, SLC19A1
Membrane 5 EMP2, GTPBP4, MLH1, MSH2, SLC19A1
apical plasma membrane 3 EMP2, RFC1, SLC19A1
basolateral plasma membrane 2 RFC1, SLC19A1
extracellular exosome 3 DUT, PGLS, RFC1
extracellular space 1 SP1
perinuclear region of cytoplasm 2 EMP2, GTPBP4
mitochondrion 4 DCK, DTYMK, DUT, UNG
intracellular membrane-bounded organelle 1 ITPA
Secreted 1 SP1
extracellular region 1 SP1
mitochondrial matrix 1 DTYMK
nuclear membrane 1 GTPBP4
cytoplasmic vesicle 1 EMP2
nucleolus 3 ENDOV, GTPBP4, NUDT16
apical part of cell 1 EMP2
Apical cell membrane 3 EMP2, RFC1, SLC19A1
Cytoplasm, perinuclear region 1 EMP2
Membrane raft 1 EMP2
mitochondrial nucleoid 1 POLH
PML body 1 SP3
chromatin 2 SP1, SP3
Chromosome 3 MLH1, MSH2, POLH
brush border membrane 2 RFC1, SLC19A1
Nucleus, nucleolus 3 ENDOV, GTPBP4, NUDT16
mismatch repair complex 2 MLH1, PMS2
chromosome, telomeric region 2 MSH2, PURA
Basolateral cell membrane 2 RFC1, SLC19A1
site of double-strand break 1 POLH
Nucleus, nucleoplasm 1 NUDT16
Cytoplasm, Stress granule 1 ENDOV
cytoplasmic stress granule 1 ENDOV
euchromatin 1 SP1
replication fork 1 POLH
[Isoform 1]: Cytoplasm 1 ENDOV
transcription repressor complex 2 SP1, SP3
male germ cell nucleus 1 MLH1
[Isoform 2]: Nucleus 1 DUT
protein-DNA complex 2 SP1, SP3
synaptonemal complex 1 MLH1
[Isoform 3]: Mitochondrion 1 DUT
site of DNA damage 1 POLH
[Isoform 7]: Cytoplasm 1 ENDOV
[Isoform 6]: Cytoplasm 1 ENDOV
MutSbeta complex 1 MSH2
DNA replication factor C complex 1 RFC1
Elg1 RFC-like complex 1 RFC1
chiasma 1 MLH1
late recombination nodule 1 MLH1
MutLalpha complex 2 MLH1, PMS2
MutSalpha complex 1 MSH2


文献列表