Verbascose (BioDeep_00000001063)

   

PANOMIX_OTCML-2023 natural product


代谢物信息卡片


(2S,3R,4S,5R,6R)-2-[[(2R,3R,4S,5R,6S)-6-[[(2R,3R,4S,5R,6S)-6-[[(2R,3S,4S,5R,6R)-6-[(2S,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)tetrahydrofuran-2-yl]oxy-3,4,5-trihydroxy-tetrahydropyran-2-yl]methoxy]-3,4,5-trihydroxy-tetrahydropyran-2-yl]methoxy]-3,4,5-trihydroxy-tetrahydropyran-2-yl]methoxy]-6-(hydroxymethyl)tetrahydropyran-3,4,5-triol

  化学式: C30H52O26 (828.2747)
中文名称: 毛蕊花糖
  谱图信息: 最多检出来源 Viridiplantae(plant) 32.26%

分子结构信息

SMILES: C(C1C(C(C(C(O1)OCC2C(C(C(C(O2)OCC3C(C(C(C(O3)OCC4C(C(C(C(O4)OC5(C(C(C(O5)CO)O)O)CO)O)O)O)O)O)O)O)O)O)O)O)O)O
InChI: InChI=1S/C30H52O26/c31-1-7-12(34)17(39)21(43)26(51-7)48-3-9-13(35)18(40)22(44)27(52-9)49-4-10-14(36)19(41)23(45)28(53-10)50-5-11-15(37)20(42)24(46)29(54-11)56-30(6-33)25(47)16(38)8(2-32)55-30/h7-29,31-47H,1-6H2/t7-,8-,9-,10-,11-,12+,13+,14+,15-,16-,17+,18+,19+,20+,21-,22-,23-,24-,25+,26+,27+,28+,29-,30+/m1/s1


描述信息

Verbascose is a pentasaccharide that is stachiose which has an additional unit of alpha-D-galactopyranose attached by a 1->6 glycosidic linkage to the terminal galactosyl residue. It is a pentasaccharide and a raffinose family oligosaccharide. It is functionally related to a stachyose.
Verbascose is a natural product found in Vigna radiata, Cajanus cajan, and other organisms with data available.
Verbascose is a member of the class of compounds known as oligosaccharides. Oligosaccharides are carbohydrates made up of 3 to 10 monosaccharide units linked to each other through glycosidic bonds. Verbascose is soluble (in water) and a very weakly acidic compound (based on its pKa). Verbascose can be synthesized from stachyose. Verbascose can also be synthesized into ajugose. Verbascose can be found in a number of food items such as sesbania flower, silver linden, wild carrot, and burbot, which makes verbascose a potential biomarker for the consumption of these food products.

同义名列表

24 个代谢物同义名

(2S,3R,4S,5R,6R)-2-[[(2R,3R,4S,5R,6S)-6-[[(2R,3R,4S,5R,6S)-6-[[(2R,3S,4S,5R,6R)-6-[(2S,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)tetrahydrofuran-2-yl]oxy-3,4,5-trihydroxy-tetrahydropyran-2-yl]methoxy]-3,4,5-trihydroxy-tetrahydropyran-2-yl]methoxy]-3,4,5-trihydroxy-tetrahydropyran-2-yl]methoxy]-6-(hydroxymethyl)tetrahydropyran-3,4,5-triol; (2S,3R,4S,5R,6R)-2-[[(2R,3R,4S,5R,6S)-6-[[(2R,3R,4S,5R,6S)-6-[[(2R,3S,4S,5R,6R)-6-[(2S,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-3,4,5-trihydroxyoxan-2-yl]methoxy]-3,4,5-trihydroxyoxan-2-yl]methoxy]-3,4,5-trihydroxyoxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol; GLUCOPYRANOSIDE, .BETA.-D-FRUCTOFURANOSYL O-.ALPHA.-D-GALACTOPYRANOSYL-(1-6)-O-.ALPHA.-D-GALACTOPYRANOSYL-(1-6)-O-.ALPHA.-D-GALACTOPYRANOSYL-(1-6)-, .ALPHA.-D-; alpha-D-Glucopyranoside, beta-D-fructofuranosyl O-alpha-D-galactopyranosyl-(1-6)-O-alpha-D-galactopyranosyl-(1-6)-O-alpha-D-galactopyranosyl-(1-6)-; beta-D-Fructofuranosyl O-alpha-D-galactopyranosyl-(1-6)-O-alpha-D-galactopyranosyl-(1-6)-O-alpha-D-galactopyranosyl-(1-6)-alpha-D-glucopyranoside; beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside; Hex-2-ulofuranosyl hexopyranosyl-(1->6)hexopyranosyl-(1->6)hexopyranosyl-(1->6)hexopyranoside; alpha-D-Galp-(1->6)-alpha-D-Galp-(1-6)-alpha-D-Galp-(1->6)-alpha-D-Glcp-(1->2)-beta-D-Fruf; beta-D-Galp-(1->6)-beta-D-Galp-(1->6)-beta-D-Galp-(1->6)-alpha-D-Glcp-(1<->2)-beta-D-Fruf; Verbascose, analytical standard; VERBASCOSE [MI]; D-Verbascose; Verbascose; AC1L9B5S; Verbascose; ?-D-Fructofuranosyl O-?-D-galactopyranosyl-(1-6)-O-?-D-galactopyranosyl-(1-6)-O-?-D-galactopyranosyl-(1-6)-?-D-glucopyranoside; (2S,3R,4S,5R,6R)-2-(((2R,3R,4S,5R,6S)-6-(((2R,3R,4S,5R,6S)-6-(((2R,3S,4S,5R,6R)-6-((2S,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl)oxy-3,4,5-trihydroxyoxan-2-yl)methoxy)-3,4,5-trihydroxyoxan-2-yl)methoxy)-3,4,5-trihydroxyoxan-2-yl)methoxy)-6-(hydroxymethyl)oxane-3,4,5-triol; (2S,3R,4S,5R,6R)-2-(((2R,3R,4S,5R,6S)-6-(((2R,3R,4S,5R,6S)-6-(((2R,3S,4S,5R,6R)-6-((2S,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)tetrahydrofuran-2-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-yl)methoxy)-3,4,5-trihydroxy-tetrahydropyran-2-yl)methoxy)-3,4,5-trihydroxy-tetrahydropyran-2-yl)methoxy)-6-(hydroxymethyl)tetrahydropyran-3,4,5-triol; b-D-Fructofuranosyl O-a-D-galactopyranosyl-(1-6)-O-a-D-galactopyranosyl-(1-6)-O-a-D-galactopyranosyl-(1-6)-a-D-glucopyranoside; b-D-Galp-(1->6)-b-D-galp-(1->6)-b-D-galp-(1->6)-a-D-GLCP-(12)-b-D-fruf; beta-D-Galp-(1->6)-beta-D-Galp-(1->6)-beta-D-Galp-(1->6)-alpha-D-Glcp-(12)-beta-D-Fruf; FLUADVWHMHPUCG-SWPIJASHSA-N; GLUCOPYRANOSIDE, BETA-D-FRUCTOFURANOSYL O-ALPHA-D-GALACTOPYRANOSYL-(1-6)-O-ALPHA-D-GALACTOPYRANOSYL-(1-6)-O-ALPHA-D-GALACTOPYRANOSYL-(1-6)-, ALPHA-D-; Glucopyranoside, ss-D-fructofuranosyl O-a-D-galactopyranosyl-(1?6)-O-a-D-galactopyranosyl-(1?6)-O-a-D-galactopyranosyl-(1?6)-, a-D- (8CI); ss-D-Fructofuranosyl O-a-D-galactopyranosyl-(1?6)-O-a-D-galactopyranosyl-(1?6)-O-a-D-galactopyranosyl-(1?6)-a-D-glucopyranoside; D-Verbascose



数据库引用编号

18 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(2)

PlantCyc(2)

代谢反应

95 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(4)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(91)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

69 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 7 AXIN2, CASP1, CAT, IL18, JUP, NLRP3, PGM1
Peripheral membrane protein 2 GBA1, JUP
Endoplasmic reticulum membrane 1 ALG11
Nucleus 4 AXIN2, CBX4, JUP, NLRP3
cytosol 8 AXIN2, CASP1, CAT, GALE, IL18, JUP, NLRP3, PGM1
nuclear body 1 CBX4
trans-Golgi network 1 GBA1
centrosome 1 AXIN2
nucleoplasm 1 CBX4
Cell membrane 3 CASP1, JUP, TNF
Golgi apparatus membrane 1 NLRP3
cell junction 1 JUP
cell surface 1 TNF
Golgi apparatus 1 GBA1
Golgi membrane 1 NLRP3
lysosomal membrane 2 GAA, GBA1
neuronal cell body 1 TNF
Cytoplasm, cytosol 2 IL18, NLRP3
Lysosome 2 GAA, GBA1
plasma membrane 7 AXIN2, CASP1, GAA, GPRIN2, IFNLR1, JUP, TNF
Membrane 7 ALG11, CAT, GAA, HRK, IFNLR1, JUP, NLRP3
extracellular exosome 6 CAT, GAA, GBA1, JUP, LYZ, PGM1
Lysosome membrane 2 GAA, GBA1
Lumenal side 1 GBA1
endoplasmic reticulum 2 GBA1, NLRP3
extracellular space 4 IL18, LYZ, RNASE3, TNF
lysosomal lumen 2 GAA, GBA1
adherens junction 1 JUP
intercalated disc 1 JUP
mitochondrion 3 CAT, HRK, NLRP3
protein-containing complex 2 CASP1, CAT
intracellular membrane-bounded organelle 2 CAT, GAA
Single-pass type I membrane protein 1 IFNLR1
Secreted 3 GAA, IL18, NLRP3
extracellular region 9 CAT, GAA, IL18, JUP, LYZ, NLRP3, PGM1, RNASE3, TNF
cytoplasmic side of plasma membrane 1 JUP
Single-pass membrane protein 1 ALG11
mitochondrial matrix 1 CAT
external side of plasma membrane 1 TNF
Z disc 1 JUP
beta-catenin destruction complex 1 AXIN2
nucleolus 2 CASP1, PNMA2
cell-cell junction 1 JUP
recycling endosome 1 TNF
Single-pass type II membrane protein 1 TNF
Membrane raft 1 TNF
Cytoplasm, cytoskeleton 1 JUP
focal adhesion 2 CAT, JUP
microtubule 1 CASP1
Cell junction, adherens junction 1 JUP
zonula adherens 1 JUP
Peroxisome 1 CAT
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
intermediate filament 1 JUP
nuclear speck 1 CBX4
Cytoplasm, cytoskeleton, microtubule organizing center 1 NLRP3
Inflammasome 1 NLRP3
interphase microtubule organizing center 1 NLRP3
NLRP3 inflammasome complex 2 CASP1, NLRP3
phagocytic cup 1 TNF
cytoskeleton 1 JUP
Nucleus, nucleolus 1 PNMA2
Endomembrane system 1 NLRP3
Cornified envelope 1 JUP
microtubule organizing center 1 NLRP3
tertiary granule membrane 1 GAA
Nucleus speckle 1 CBX4
ficolin-1-rich granule lumen 3 CAT, JUP, PGM1
secretory granule lumen 1 CAT
PcG protein complex 1 CBX4
PRC1 complex 1 CBX4
specific granule lumen 2 JUP, LYZ
tertiary granule lumen 2 LYZ, PGM1
azurophil granule membrane 1 GAA
azurophil granule lumen 2 LYZ, RNASE3
AIM2 inflammasome complex 1 CASP1
protein-DNA complex 1 JUP
ficolin-1-rich granule membrane 1 GAA
canonical inflammasome complex 1 CASP1
Cell junction, desmosome 1 JUP
desmosome 1 JUP
catenin complex 1 JUP
[Tumor necrosis factor, soluble form]: Secreted 1 TNF
catalase complex 1 CAT
autolysosome lumen 1 GAA
gamma-catenin-TCF7L2 complex 1 JUP
IPAF inflammasome complex 1 CASP1
NLRP1 inflammasome complex 1 CASP1
protease inhibitor complex 1 CASP1
interleukin-28 receptor complex 1 IFNLR1
[C-domain 2]: Secreted 1 TNF
[Tumor necrosis factor, membrane form]: Membrane 1 TNF
[C-domain 1]: Secreted 1 TNF


文献列表

  • María Ciudad-Mulero, Virginia Fernández-Ruiz, Carmen Cuadrado, Claudia Arribas, Mercedes M Pedrosa, José De J Berrios, James Pan, Patricia Morales. Novel gluten-free formulations from lentil flours and nutritional yeast: Evaluation of extrusion effect on phytochemicals and non-nutritional factors. Food chemistry. 2020 Jun; 315(?):126175. doi: 10.1016/j.foodchem.2020.126175. [PMID: 31991254]
  • Sondos Njoumi, Marie Josephe Amiot, Isabelle Rochette, Sihem Bellagha, Claire Mouquet-Rivier. Soaking and cooking modify the alpha-galacto-oligosaccharide and dietary fibre content in five Mediterranean legumes. International journal of food sciences and nutrition. 2019 Aug; 70(5):551-561. doi: 10.1080/09637486.2018.1544229. [PMID: 30614326]
  • Sarah Findling, Klaus Zanger, Stephan Krueger, Gertrud Lohaus. Subcellular distribution of raffinose oligosaccharides and other metabolites in summer and winter leaves of Ajuga reptans (Lamiaceae). Planta. 2015 Jan; 241(1):229-41. doi: 10.1007/s00425-014-2183-2. [PMID: 25269399]
  • Zhuqing Dai, Di Su, Yun Zhang, Yi Sun, Bing Hu, Hong Ye, Saqib Jabbar, Xiaoxiong Zeng. Immunomodulatory activity in vitro and in vivo of verbascose from mung beans (Phaseolus aureus). Journal of agricultural and food chemistry. 2014 Nov; 62(44):10727-35. doi: 10.1021/jf503510h. [PMID: 25317918]
  • Manu P Gangola, Yogendra P Khedikar, Pooran M Gaur, Monica Båga, Ravindra N Chibbar. Genotype and growing environment interaction shows a positive correlation between substrates of raffinose family oligosaccharides (RFO) biosynthesis and their accumulation in chickpea ( Cicer arietinum L.) seeds. Journal of agricultural and food chemistry. 2013 May; 61(20):4943-52. doi: 10.1021/jf3054033. [PMID: 23621405]
  • Michaela Hundertmark, Antoaneta V Popova, Saskia Rausch, Robert Seckler, Dirk K Hincha. Influence of drying on the secondary structure of intrinsically disordered and globular proteins. Biochemical and biophysical research communications. 2012 Jan; 417(1):122-8. doi: 10.1016/j.bbrc.2011.11.067. [PMID: 22155233]