FA 6:2;O5 (BioDeep_00000629080)

Main id: BioDeep_00000005573

Secondary id: BioDeep_00000004993, BioDeep_00000014568, BioDeep_00001869391, BioDeep_00001869720


代谢物信息卡片


2,5-Dioxo-D-gluconic acid;2,5-didehydro-D-gluconic acid;2,5-diketo-D-gluconic acid;D-threo-2,5-Hexodiulosonic acid

化学式: C6H8O7 (192.027)
中文名称:
谱图信息: 最多检出来源 Homo sapiens(plant) 7.57%

分子结构信息

SMILES: C(=O)(O)C(=O)C(=O)[C@H](O)[C@@H](O)CO
InChI: InChI=1S/C6H8O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-3,7-9H,1H2,(H,12,13)/t2-,3+/m0/s1

描述信息

同义名列表

12 个代谢物同义名

(4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoic acid; (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate; 2,3-dioxo-4R,5S,6-trihydroxy-hexanoic acid; 2,3-Diketo-L-gulonic acid; 2,3-Diketogulonic Acid; 2,3-Diketo-L-gulonate; diketo-gulonic acid; FA 6:2;O5; 2,5-Dioxo-D-gluconic acid;2,5-didehydro-D-gluconic acid;2,5-diketo-D-gluconic acid;D-threo-2,5-Hexodiulosonic acid; D-threo-hexo-2,5-diulosonic acid; 2,5-didehydro-D-gluconic acid; 2,5-Didehydro-D-gluconate



数据库引用编号

17 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

1 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有：

  • PubMed: 来源于PubMed文献库中的文献信息，我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表，这个列表按照代谢物同时出现的文献数量降序排序，取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘，得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序，取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中，存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称，可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 9 AKR1B1, AKR1C3, BIRC5, CAT, CHM, MIP, PQBP1, RGN, SND1
Peripheral membrane protein 1 ACHE
Nucleus 7 ACHE, AKR1C3, BIRC5, CHM, PQBP1, RGN, SND1
cytosol 7 AKR1A1, AKR1B1, AKR1C3, BIRC5, CAT, CHM, SND1
nuclear body 1 PQBP1
nucleoplasm 3 AKR1B1, BIRC5, PQBP1
Cell membrane 2 ACHE, MIP
Cytoplasmic granule 1 PQBP1
Multi-pass membrane protein 3 CYB561, MIP, MT-CYB
Synapse 2 ACHE, AKR1A1
cell junction 1 MIP
cell surface 1 ACHE
Golgi apparatus 1 ACHE
Golgi membrane 1 INS
lysosomal membrane 1 CYB561
mitochondrial inner membrane 1 MT-CYB
neuromuscular junction 1 ACHE
Cytoplasm, cytosol 2 AKR1A1, CHM
plasma membrane 2 ACHE, MIP
Membrane 6 ACHE, CAT, CYB561, MIP, MT-CYB, SND1
apical plasma membrane 2 AKR1A1, MIP
extracellular exosome 5 AKR1A1, AKR1B1, AKR1C3, CAT, SND1
endoplasmic reticulum 1 MIP
extracellular space 4 ACHE, AKR1A1, AKR1B1, INS
perinuclear region of cytoplasm 1 ACHE
gap junction 1 MIP
mitochondrion 4 AKR1B1, CAT, MIP, MT-CYB
protein-containing complex 2 BIRC5, CAT
intracellular membrane-bounded organelle 1 CAT
Secreted 2 ACHE, INS
extracellular region 3 ACHE, CAT, INS
mitochondrial matrix 2 CAT, MIP
Extracellular side 1 ACHE
microtubule cytoskeleton 1 BIRC5
nucleolus 1 MIP
midbody 1 BIRC5
Apical cell membrane 1 AKR1A1
Mitochondrion inner membrane 1 MT-CYB
Cytoplasm, cytoskeleton, spindle 1 BIRC5
focal adhesion 1 CAT
microtubule 1 BIRC5
spindle 1 BIRC5
Peroxisome 1 CAT
basement membrane 1 ACHE
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
Cell junction, gap junction 1 MIP
nuclear speck 1 PQBP1
interphase microtubule organizing center 1 BIRC5
cilium 1 MIP
Chromosome 1 BIRC5
centriole 1 BIRC5
Nucleus, nucleolus 1 MIP
nuclear chromosome 1 BIRC5
Lipid-anchor, GPI-anchor 1 ACHE
endosome lumen 1 INS
Chromosome, centromere 1 BIRC5
Chromosome, centromere, kinetochore 1 BIRC5
Melanosome 1 SND1
cytoplasmic stress granule 1 PQBP1
Nucleus speckle 1 PQBP1
side of membrane 1 ACHE
ficolin-1-rich granule lumen 1 CAT
secretory granule lumen 2 CAT, INS
Golgi lumen 1 INS
endoplasmic reticulum lumen 1 INS
kinetochore 1 BIRC5
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
chromosome, centromeric region 1 BIRC5
respiratory chain complex III 1 MT-CYB
chromosome passenger complex 1 BIRC5
cytoplasmic microtubule 1 BIRC5
synaptic cleft 1 ACHE
spindle microtubule 1 BIRC5
survivin complex 1 BIRC5
neuronal ribonucleoprotein granule 1 PQBP1
catalase complex 1 CAT
Cytoplasmic vesicle, secretory vesicle, chromaffin granule membrane 1 CYB561
chromaffin granule membrane 1 CYB561
[Isoform H]: Cell membrane 1 ACHE
Rab-protein geranylgeranyltransferase complex 1 CHM
dense body 1 SND1
RNAi effector complex 1 SND1


文献列表

  • Rebecca A Dewhirst, Lorna Murray, C Logan Mackay, Ian H Sadler, Stephen C Fry. Characterisation of the non-oxidative degradation pathway of dehydroascorbic acid in slightly acidic aqueous solution. Archives of biochemistry and biophysics. 2020 03; 681(?):108240. doi: 10.1016/j.abb.2019.108240. [PMID: 31883928]
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  • Anna Kärkönen, Rebecca A Dewhirst, C Logan Mackay, Stephen C Fry. Metabolites of 2,3-diketogulonate delay peroxidase action and induce non-enzymic H2O2 generation: Potential roles in the plant cell wall. Archives of biochemistry and biophysics. 2017 04; 620(?):12-22. doi: 10.1016/j.abb.2017.03.006. [PMID: 28315301]
  • Harriet T Parsons, Stephen C Fry. Oxidation of dehydroascorbic acid and 2,3-diketogulonate under plant apoplastic conditions. Phytochemistry. 2012 Mar; 75(?):41-9. doi: 10.1016/j.phytochem.2011.12.005. [PMID: 22226246]
  • Anna Kärkönen, Stephen C Fry. Effect of ascorbate and its oxidation products on H2O2 production in cell-suspension cultures of Picea abies and in the absence of cells. Journal of experimental botany. 2006; 57(8):1633-44. doi: 10.1093/jxb/erj197. [PMID: 16698813]
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