Glyceraldehyde (BioDeep_00000003228)

Main id: BioDeep_00000014393

Secondary id: BioDeep_00000400043, BioDeep_00001868566

natural product human metabolite PANOMIX_OTCML-2023 Endogenous blood metabolite BioNovoGene_Lab2019


代谢物信息卡片


(2R)-2,3-dihydroxypropanal

化学式: C3H6O3 (90.0317)
中文名称: D-(+)-甘油醛, DL-甘油醛, 甘油醛
谱图信息: 最多检出来源 Viridiplantae(plant) 15.7%

分子结构信息

SMILES: C(=O)[C@@H](CO)O
InChI: InChI=1/C3H6O3/c4-1-3(6)2-5/h1,3,5-6H,2H2/t3-/m0/s1

描述信息

DL-Glyceraldehyde is a monosaccharide. DL-Glyceraldehyde is the simplest aldose. DL-Glyceraldehyde can be used for various biochemical studies[1].

同义名列表

9 个代谢物同义名

(2R)-2,3-dihydroxypropanal; DL-Glyceric aldehyde; D-(+)-Glyceraldehyde; DL-Glyceraldehyde; D-Glyceraldehyde; Glyceraldehyde; D-Glyceraldehyde; Glyceraldehyde; Glyceraldehyde



数据库引用编号

25 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(2)

BioCyc(5)

PlantCyc(0)

代谢反应

114 个相关的代谢反应过程信息。

Reactome(72)

BioCyc(7)

WikiPathways(3)

Plant Reactome(0)

INOH(2)

PlantCyc(4)

COVID-19 Disease Map(1)

PathBank(25)

PharmGKB(0)

5 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 9 ALB, CAT, GAPDH, GCK, GK, GLO1, KHK, PKM, VEGFA
Peripheral membrane protein 1 GCK
Nucleus 6 ALB, GAPDH, GCK, GK, PKM, VEGFA
cytosol 11 AKR1A1, AKR1B10, ALB, CAT, GAPDH, GCK, GK, GLO1, KHK, PKM, SST
centrosome 1 ALB
nucleoplasm 2 GCK, GLO1
Cell membrane 1 CD80
Golgi apparatus membrane 1 GCK
Synapse 1 AKR1A1
cell junction 1 AGER
cell surface 5 AGER, CD40, CD80, ICAM1, VEGFA
Golgi apparatus 2 ALB, VEGFA
Golgi membrane 2 GCK, INS
neuronal cell body 2 CD40, SST
postsynapse 1 AGER
Cytoplasm, cytosol 3 AKR1A1, GAPDH, GK
Lysosome 1 AKR1B10
plasma membrane 8 AGER, CD40, CD80, GAPDH, GCG, GLO1, ICAM1, IFNLR1
Membrane 8 AGER, CAT, CD40, CD80, GAPDH, ICAM1, IFNLR1, VEGFA
apical plasma membrane 2 AGER, AKR1A1
basolateral plasma membrane 1 GCK
extracellular exosome 10 AKR1A1, ALB, CAT, CD40, GAPDH, GK, GLO1, ICAM1, KHK, PKM
endoplasmic reticulum 2 ALB, VEGFA
extracellular space 9 AKR1A1, ALB, CCL2, CD40, GCG, ICAM1, INS, SST, VEGFA
perinuclear region of cytoplasm 1 GAPDH
adherens junction 1 VEGFA
mitochondrion 5 AKR1B10, CAT, GCK, GK, PKM
protein-containing complex 2 ALB, CAT
intracellular membrane-bounded organelle 3 CAT, CD40, GAPDH
Single-pass type I membrane protein 5 AGER, CD40, CD80, ICAM1, IFNLR1
Secreted 7 AKR1B10, ALB, CCL2, GCG, INS, SST, VEGFA
extracellular region 10 AGER, AKR1B10, ALB, CAT, CCL2, GCG, INS, PKM, SST, VEGFA
Mitochondrion outer membrane 1 GK
Single-pass membrane protein 1 GK
mitochondrial outer membrane 1 GK
mitochondrial matrix 1 CAT
anchoring junction 1 ALB
nuclear membrane 1 GAPDH
CD40 receptor complex 1 CD40
external side of plasma membrane 3 CD40, CD80, ICAM1
varicosity 1 CD40
Extracellular vesicle 1 PKM
Secreted, extracellular space, extracellular matrix 1 VEGFA
microtubule cytoskeleton 1 GAPDH
vesicle 2 GAPDH, PKM
Apical cell membrane 1 AKR1A1
Cytoplasm, perinuclear region 1 GAPDH
Membrane raft 1 ICAM1
Cytoplasm, cytoskeleton 1 GAPDH
focal adhesion 2 CAT, ICAM1
GABA-ergic synapse 1 SST
extracellular matrix 1 VEGFA
Peroxisome 1 CAT
Peroxisome matrix 1 CAT
peroxisomal matrix 1 CAT
peroxisomal membrane 1 CAT
collagen-containing extracellular matrix 2 ICAM1, PKM
secretory granule 1 VEGFA
ciliary basal body 1 ALB
cilium 1 PKM
cytoskeleton 1 GAPDH
centriole 1 ALB
spindle pole 1 ALB
blood microparticle 1 ALB
Basolateral cell membrane 1 GCK
fibrillar center 1 AGER
endosome lumen 1 INS
Lipid droplet 1 GAPDH
[Isoform 4]: Cytoplasm, cytosol 1 GK
ficolin-1-rich granule lumen 2 CAT, PKM
secretory granule lumen 4 CAT, GCG, INS, PKM
Golgi lumen 1 INS
endoplasmic reticulum lumen 3 ALB, GCG, INS
platelet alpha granule lumen 2 ALB, VEGFA
transport vesicle 1 INS
Endoplasmic reticulum-Golgi intermediate compartment membrane 1 INS
immunological synapse 1 ICAM1
neuronal dense core vesicle 1 SST
ribonucleoprotein complex 1 GAPDH
[Isoform 1]: Cell membrane 1 AGER
Rough endoplasmic reticulum 1 PKM
GAIT complex 1 GAPDH
[Glucagon-like peptide 1]: Secreted 1 GCG
catalase complex 1 CAT
protein complex involved in cell adhesion 1 CD80
[Isoform M2]: Cytoplasm 1 PKM
[Isoform M1]: Cytoplasm 1 PKM
[N-VEGF]: Cytoplasm 1 VEGFA
[VEGFA]: Secreted 1 VEGFA
[Isoform L-VEGF189]: Endoplasmic reticulum 1 VEGFA
[Isoform VEGF121]: Secreted 1 VEGFA
[Isoform VEGF165]: Secreted 1 VEGFA
VEGF-A complex 1 VEGFA
[Isoform 3]: Mitochondrion outer membrane 1 GK
ciliary transition fiber 1 ALB
interleukin-28 receptor complex 1 IFNLR1
[Isoform 10]: Cell membrane 1 AGER


文献列表

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