cellohexose (BioDeep_00000000856)

   

PANOMIX_OTCML-2023


代谢物信息卡片


beta-D-gluco-hexopyranosyl-(1->4)-beta-D-gluco-hexopyranosyl-(1->4)-beta-D-gluco-hexopyranosyl-(1->4)-beta-D-gluco-hexopyranosyl-(1->4)-beta-D-gluco-hexopyranosyl-(1->4)-beta-D-gluco-hexopyranose

化学式: C36H62O31 (990.3275)
中文名称: 纤维六糖
谱图信息: 最多检出来源 Homo sapiens(feces) 14.38%

分子结构信息

SMILES: C(C1C(C(C(C(O1)OC2C(OC(C(C2O)O)OC3C(OC(C(C3O)O)OC4C(OC(C(C4O)O)OC5C(OC(C(C5O)O)OC(C(CO)O)C(C(C=O)O)O)CO)CO)CO)CO)O)O)O)O
InChI: InChI=1S/C36H62O31/c37-1-7-13(43)14(44)21(51)32(58-7)64-27-9(3-39)60-34(23(53)16(27)46)66-29-11(5-41)62-36(25(55)18(29)48)67-30-12(6-42)61-35(24(54)19(30)49)65-28-10(4-40)59-33(22(52)17(28)47)63-26-8(2-38)57-31(56)20(50)15(26)45/h7-56H,1-6H2/t7-,8-,9-,10-,11-,12-,13-,14+,15-,16-,17-,18-,19-,20-,21-,22-,23-,24-,25-,26-,27-,28-,29-,30-,31-,32+,33+,34+,35+,36+/m1/s1



数据库引用编号

13 个数据库交叉引用编号

分类词条

相关代谢途径

Reactome(0)

BioCyc(0)

PlantCyc(0)

代谢反应

0 个相关的代谢反应过程信息。

Reactome(0)

BioCyc(0)

WikiPathways(0)

Plant Reactome(0)

INOH(0)

PlantCyc(0)

COVID-19 Disease Map(0)

PathBank(0)

PharmGKB(0)

0 个相关的物种来源信息

在这里通过桑基图来展示出与当前的这个代谢物在我们的BioDeep知识库中具有相关联信息的其他代谢物。在这里进行关联的信息来源主要有:

  • PubMed: 来源于PubMed文献库中的文献信息,我们通过自然语言数据挖掘得到的在同一篇文献中被同时提及的相关代谢物列表,这个列表按照代谢物同时出现的文献数量降序排序,取前10个代谢物作为相关研究中关联性很高的代谢物集合展示在桑基图中。
  • NCBI Taxonomy: 通过文献数据挖掘,得到的代谢物物种来源信息关联。这个关联信息同样按照出现的次数降序排序,取前10个代谢物作为高关联度的代谢物集合展示在桑吉图上。
  • Chemical Taxonomy: 在物质分类上处于同一个分类集合中的其他代谢物
  • Chemical Reaction: 在化学反应过程中,存在为当前代谢物相关联的生化反应过程中的反应底物或者反应产物的关联代谢物信息。

点击图上的相关代谢物的名称,可以跳转到相关代谢物的信息页面。

亚细胞结构定位 关联基因列表
Cytoplasm 6 CASP3, GCK, JUP, NF1, TFDP3, TLR2
Peripheral membrane protein 3 GBA1, GCK, JUP
Nucleus 5 CASP3, GCK, JUP, NF1, TFDP3
cytosol 4 CASP3, GCK, JUP, NF1
dendrite 2 NECTIN1, NF1
trans-Golgi network 1 GBA1
nucleoplasm 3 CASP3, GCK, NF1
Cell membrane 5 JUP, NECTIN1, NF1, PTGDR2, TRPC7
Multi-pass membrane protein 2 PTGDR2, TRPC7
Golgi apparatus membrane 2 GCK, XYLT1
cell junction 1 JUP
cell surface 1 TLR2
glutamatergic synapse 2 CASP3, NF1
Golgi apparatus 2 GBA1, TLR2
Golgi membrane 2 GCK, XYLT1
lysosomal membrane 2 GBA1, TRPC7
neuronal cell body 1 CASP3
Lysosome 2 GBA1, TRPC7
Presynapse 1 NF1
plasma membrane 7 CD160, JUP, NECTIN1, NF1, PTGDR2, TLR2, TRPC7
Membrane 6 JUP, NECTIN1, NF1, TLR2, TRPC7, XYLT1
axon 1 NF1
basolateral plasma membrane 1 GCK
extracellular exosome 2 GBA1, JUP
Lysosome membrane 1 GBA1
Lumenal side 1 GBA1
endoplasmic reticulum 1 GBA1
extracellular space 2 GH1, XYLT1
lysosomal lumen 1 GBA1
perinuclear region of cytoplasm 1 TRPC7
adherens junction 2 JUP, NECTIN1
intercalated disc 1 JUP
mitochondrion 2 COA4, GCK
postsynaptic density 1 CASP3
Single-pass type I membrane protein 2 NECTIN1, TLR2
Secreted 2 GH1, XYLT1
extracellular region 4 CD160, GH1, JUP, NECTIN1
cytoplasmic side of plasma membrane 1 JUP
hippocampal mossy fiber to CA3 synapse 1 NECTIN1
transcription regulator complex 1 TFDP3
perikaryon 1 TRPC7
Z disc 1 JUP
cytoplasmic vesicle 1 TRPC7
nucleolus 1 NF1
cell-cell junction 1 JUP
Single-pass type II membrane protein 1 XYLT1
presynaptic active zone membrane 1 NECTIN1
Membrane raft 1 TLR2
Cytoplasm, cytoskeleton 1 JUP
focal adhesion 1 JUP
Cell junction, adherens junction 2 JUP, NECTIN1
zonula adherens 1 JUP
mitochondrial intermembrane space 1 COA4
intermediate filament 1 JUP
receptor complex 1 TLR2
neuron projection 1 PTGDR2
chromatin 1 TFDP3
Cytoplasmic vesicle, phagosome membrane 1 TLR2
cell projection 2 TLR2, TRPC7
phagocytic vesicle membrane 1 TLR2
cytoskeleton 1 JUP
Nucleus, nucleolus 1 NF1
Basolateral cell membrane 1 GCK
Lipid-anchor, GPI-anchor 1 CD160
[Isoform 2]: Cell membrane 1 TRPC7
nuclear envelope 1 TRPC7
Nucleus envelope 1 TRPC7
endosome lumen 1 GH1
Cornified envelope 1 JUP
Cytoplasmic vesicle membrane 1 TRPC7
specific granule membrane 1 TRPC7
tertiary granule membrane 1 TRPC7
Presynaptic cell membrane 1 NECTIN1
cell body 1 TLR2
side of membrane 1 CD160
ficolin-1-rich granule lumen 1 JUP
secretory granule membrane 1 TLR2
specific granule lumen 1 JUP
protein-DNA complex 1 JUP
ficolin-1-rich granule membrane 1 TRPC7
death-inducing signaling complex 1 CASP3
apical junction complex 1 NECTIN1
[Isoform 1]: Cell membrane 1 TRPC7
Cell junction, desmosome 1 JUP
desmosome 1 JUP
Toll-like receptor 1-Toll-like receptor 2 protein complex 1 TLR2
Toll-like receptor 2-Toll-like receptor 6 protein complex 1 TLR2
catenin complex 1 JUP
cell-cell contact zone 1 NECTIN1
[Isoform 3]: Cell membrane 1 TRPC7
[CD160 antigen]: Cell membrane 1 CD160
growth hormone receptor complex 1 GH1
gamma-catenin-TCF7L2 complex 1 JUP
growth cone membrane 1 NECTIN1
cation channel complex 1 TRPC7
Golgi cis cisterna 1 XYLT1
[Isoform Alpha]: Cell membrane 1 NECTIN1
[Isoform Delta]: Cell membrane 1 NECTIN1
[Isoform Gamma]: Secreted 1 NECTIN1


文献列表

  • Wei Xie, Qi Yu, Ruiqing Zhang, Yun Liu, Ruoting Cao, Sidi Wang, Ruoting Zhan, Zhongqiu Liu, Kui Wang, Caiyan Wang. Insights into the Catalytic Mechanism of a Novel XynA and Structure-Based Engineering for Improving Bifunctional Activities. Biochemistry. 2021 07; 60(26):2071-2083. doi: 10.1021/acs.biochem.1c00134. [PMID: 34156819]
  • Ruiqin Zhong, Dongtao Cui, Dennis R Phillips, Elizabeth A Richardson, Zheng-Hua Ye. A Group of O-Acetyltransferases Catalyze Xyloglucan Backbone Acetylation and Can Alter Xyloglucan Xylosylation Pattern and Plant Growth When Expressed in Arabidopsis. Plant & cell physiology. 2020 Jun; 61(6):1064-1079. doi: 10.1093/pcp/pcaa031. [PMID: 32167545]
  • Alan T Culbertson, Yi-Hsiang Chou, Adrienne L Smith, Zachary T Young, Alesia A Tietze, Sylvain Cottaz, Régis Fauré, Olga A Zabotina. Enzymatic Activity of Xyloglucan Xylosyltransferase 5. Plant physiology. 2016 07; 171(3):1893-904. doi: 10.1104/pp.16.00361. [PMID: 27208276]
  • Izumi Sasanuma, Go Hirakawa. Purification and characterization of a beta-glucosidase from the root parasitic plant Orobanche minor Sm. Bioscience, biotechnology, and biochemistry. 2010; 74(3):646-8. doi: 10.1271/bbb.90335. [PMID: 20208378]
  • Aldino Viegas, Natércia F Brás, Nuno M F S A Cerqueira, Pedro Alexandrino Fernandes, José A M Prates, Carlos M G A Fontes, Marta Bruix, Maria João Romão, Ana Luísa Carvalho, Maria João Ramos, Anjos L Macedo, Eurico J Cabrita. Molecular determinants of ligand specificity in family 11 carbohydrate binding modules: an NMR, X-ray crystallography and computational chemistry approach. The FEBS journal. 2008 May; 275(10):2524-35. doi: 10.1111/j.1742-4658.2008.06401.x. [PMID: 18422658]
  • David M Cavalier, Kenneth Keegstra. Two xyloglucan xylosyltransferases catalyze the addition of multiple xylosyl residues to cellohexaose. The Journal of biological chemistry. 2006 Nov; 281(45):34197-207. doi: 10.1074/jbc.m606379200. [PMID: 16982611]
  • Emma R Master, Ulla J Rudsander, Weilin Zhou, Hongbin Henriksson, Christina Divne, Stuart Denman, David B Wilson, Tuula T Teeri. Recombinant expression and enzymatic characterization of PttCel9A, a KOR homologue from Populus tremula x tremuloides. Biochemistry. 2004 Aug; 43(31):10080-9. doi: 10.1021/bi049453x. [PMID: 15287736]
  • Simon J Charnock, David N Bolam, Didier Nurizzo, Lóránd Szabó, Vincent A McKie, Harry J Gilbert, Gideon J Davies. Promiscuity in ligand-binding: The three-dimensional structure of a Piromyces carbohydrate-binding module, CBM29-2, in complex with cello- and mannohexaose. Proceedings of the National Academy of Sciences of the United States of America. 2002 Oct; 99(22):14077-82. doi: 10.1073/pnas.212516199. [PMID: 12391332]
  • D N Bolam, A Ciruela, S McQueen-Mason, P Simpson, M P Williamson, J E Rixon, A Boraston, G P Hazlewood, H J Gilbert. Pseudomonas cellulose-binding domains mediate their effects by increasing enzyme substrate proximity. The Biochemical journal. 1998 May; 331 ( Pt 3)(?):775-81. doi: 10.1042/bj3310775. [PMID: 9560304]